LOCUS       XM_039080384            2206 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin repeat domain 33 (Ankrd33),
            transcript variant X1, mRNA.
ACCESSION   XM_039080384
VERSION     XM_039080384.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080384.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2206
                     /gene="Ankrd33"
                     /note="ankyrin repeat domain 33; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins, and 83% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:683410"
                     /db_xref="RGD:1586880"
     CDS             732..1898
                     /gene="Ankrd33"
                     /codon_start=1
                     /product="photoreceptor ankyrin repeat protein isoform X1"
                     /protein_id="XP_038936312.1"
                     /db_xref="GeneID:683410"
                     /db_xref="RGD:1586880"
                     /translation="MKRDLGCRQRSHCRPWSGLDMTEAPPCPGGKTPSPGCGLKTLYW
                     ACVHNDLAELQARLDVGVSPDEASQVDGNGRTGLMVACYHGYGSIVALLSGCPFLDVN
                     QQDKDGNTALMLAAQAGHVPLVTLLLNYFAGLDLERRDQRGLTALMKAAIRDRSECVV
                     ALLMAGADLSSVDPVRGKTALEWAVLTDSFDTVRKIRQLLRRPQAEQLSLHYQPEWPA
                     LAQLVAQAQDQAAPSLLERLQATLNLSFAQFPQEGGVLDHLVTVTTSLASPFLTTACH
                     TLCPDHPPTLGIRGKSVPELLGTAPPPPPAPHPPQEVPVPQAFAPYQSPQSMLSQWLQ
                     SRESTSLRSQVPKILLSKAPSPAAQYELILRPPGKQSLTLPIWRFQEKKKKEEE"
ORIGIN      
        1 gggctgtctc tccagctgcc tgaaaactct catgttttga tttctttggg taaactctgg
       61 agcccacttc cccatagccc cttccccaaa tctgctcctt tgaagaagaa gggatctcag
      121 gcttctcttg caaggtcaca tctaaatacc gctgacttcc tgctatgaag cggagaaaga
      181 ttagcccaga gagacccact cctctctggg cctggagaaa ctgccaccag ccaagtttag
      241 caggatctta gggcggggac tgggcaatgg caggtaatac agccatccct ccgggccccc
      301 aatcccttcc taacccgctt gacctggctc agccccgagg tgttgatggc agctttctgc
      361 agacacagcc atctgtcacc tgcctttctt tttcctggtg acagctaccc cacagaagga
      421 ctagagtgat ttttgaggtg tgggggtgta ctgagccaca ggctggcccc ctgccgtggt
      481 ggtcttttgg agaccctaga gccccaggta aggttggggg aggggaaacg gtaacccctg
      541 ccatgagctt cctttgggac ctgacctaca tacagtaaga tgctttgact gcctgtcttg
      601 ggtctaggca gaagtgagac acccaccggg gtaaagggtt tccctgggga gctggtgcag
      661 ctgtggggac atagccaacc aggactgcaa gaggaactgg tccttggtgt actgtcacag
      721 ctgcctgctg aatgaaaagg gacttgggct gcaggcagag gagccactgt cgcccctgga
      781 gcggactgga catgactgag gcaccgccct gtccaggcgg caagacacca agtcctggat
      841 gcggtctgaa gacgctgtac tgggcatgtg tccacaatga cctcgctgag ctccaagcca
      901 ggctggacgt cggggtgtct ccagatgagg cctcccaagt ggacggcaat gggaggacag
      961 gcctcatggt cgcatgctac cacggctatg gttccattgt ggctctgctc agcggctgtc
     1021 ctttcctgga cgtgaaccag caggacaaag acgggaacac agccctcatg ctggcggctc
     1081 aagcaggtca tgtgcctctg gtgactctcc tgctcaacta ctttgctggc ctggacctgg
     1141 aacgcaggga ccagcgggga ctgacagctc tgatgaaggc tgccattcgg gaccgctctg
     1201 agtgtgtggt tgcactcctt atggcaggtg ctgacctgag ctccgtggat cctgtccggg
     1261 gcaagacagc cttggaatgg gctgttctaa cggacagctt tgacactgta cggaagatcc
     1321 ggcagctgct gaggcggccc caggcagagc agctcagcct gcactaccag ccagagtggc
     1381 cagccttggc ccaacttgtg gcccaggccc aggatcaggc tgccccatcc ctcctagaga
     1441 ggctgcaggc tactctgaac ctctcctttg ctcagtttcc tcaggaaggg ggtgtcctgg
     1501 accacttggt gactgtcacc accagtttgg ccagtccctt cctgaccact gcctgccaca
     1561 cactgtgccc tgaccaccca cccacactgg gcattcgggg caaatcagtg ccagagctgt
     1621 tgggtactgc ccctccacct cctccagcac cccatcctcc tcaggaagtc cctgttcccc
     1681 aggcctttgc cccctaccag agccctcaga gtatgctctc ccagtggcta cagtccaggg
     1741 agagcaccag tctcaggtcc caagtcccta agatcctcct ctccaaggca ccttcccctg
     1801 ctgcacagta cgagttgata cttagacctc cagggaagca aagtctgact cttcccatct
     1861 ggagattcca ggagaagaag aagaaggagg aggaataagc agtgaaccac gaggaggtag
     1921 actaggccaa gctggaggca agtaagactc attcccgtcc ggaacctctt tctgcatccc
     1981 aaccatctct gccagcggga acctgctccc accaagtatt caaggttgtc cacagcagcg
     2041 tctgcgggag agacgggacc aacccggtgt ctgccggcag gggactgacc ggctacagcg
     2101 gttacggcag taataaccac acactgtatt ctgtgtagga tgtcacaaag caagagaaag
     2161 cgaactgctc tcacgtgaaa cctacaagtt gtatcaagta aacagc
//
