LOCUS       XM_039103463            3997 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin repeat domain 31 (Ankrd31),
            transcript variant X1, mRNA.
ACCESSION   XM_039103463
VERSION     XM_039103463.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103463.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3997
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3997
                     /gene="Ankrd31"
                     /note="ankyrin repeat domain 31; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100359720"
                     /db_xref="RGD:2323520"
     CDS             299..3796
                     /gene="Ankrd31"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 31
                     isoform X1"
                     /protein_id="XP_038959391.1"
                     /db_xref="GeneID:100359720"
                     /db_xref="RGD:2323520"
                     /translation="MEKGDQASDCDSDETVIEGSVTENELEDDELPWRRFLSQDTTFT
                     SEFCFHSGINGTQNGMHSPEIQLGLKLRKDSQEQNDKNEVLRALSEDLVLQDPQDETT
                     QNQVLLQTRKELPVFSVSVPHPEVSWSHQTTGGPGAEICEHLPHSEKELSENSDSPEV
                     SLLSGTSLMASDLVTLKEQLTEPVKTLAVPNTFSEPGKKVTLTLTSIETKDEESSLET
                     FVSALEKLLESPEYTQEERLLEIMNDFSPQEFLTSLSNSMSSVSVPSSALSAGDRDEL
                     GNKAGAVLPAQLLAAINTLPGADVGPICQGQERSSSVSGGNGCLEVQPAMSQKDEDCT
                     HIAQNIEDPKPFRLQTLTHENATSYEQLNKKENSDSMKNTSTQKTPRVLRRSSRLEKL
                     RASRDVHTDVILERPERILSEALSCKDRINSIFTTENFSKRKNMHSSRFKNEQIRKNE
                     QLRIKNEVNTAGINKRNAKGESRLHVASKGGNLSLVKMLIESGADVNLKDNAGWTPLH
                     KASSGGFDDIIIELLKAGANVNCENVDGILPLHGASAGNHLKAAEILLEHGANPSQKD
                     QKQRTALDEADDEKMKELLKSHGAIETAHGEERSSIVPVKIPAIRPKRYKPFICDNDK
                     AVGSPAPSHKAKRSESRPVHQTISAILKDLEEKQETLLKFEIRNSEDEEQYIEKMLDI
                     KEVMDNILAQQKTERDDLAKKYRVSMESFKHGALREQLANLATRQKSLLVVAKKQKKI
                     RLKIQNYKTATPSSGNNLRKLPCNSDISSDKTSQDPPGVGNSALAQSGSLSPNNLAYR
                     SMQEMPFSPEIQSDSQNTNICLNAEAIRGEEFPGSDTNSKQNVQDCASGGLLKSTSDD
                     TEKMTSSSQPVALTSQAEYSQAENFFPETSVKGYGFDAPSLTGTINISEDKSIFSQND
                     VCLPAFPQNQGLSRCKPKRRNKRTGSQQPSEGASKPLAQTVAILDTYTARQTKPCLKK
                     SASVALNADSMQISPPSVSAHQPSSKKAPHHSTTPRKKTVQLKDLILLGRINPGNNIL
                     EFKTQETTHRASVLLSGKLKVENGQIYQNPVTWLKDVLGGGSYVTWNYAWNKVTYLGK
                     ELLKYVSEAPPVSAEPSSTPQQHQPCLSAGTSRESMQIIPHYLQIKEILLISDQELLP
                     CHVMEQHWKFYVECKKLSF"
ORIGIN      
        1 ttattttaac tatgtgtata ttatgtggtg atgtgcttat gagtgcaggt gctcaaagga
       61 cccagatgca tcagataccc ctgtatgcag aatcacgtat ggtttcaagc tgcctgatgt
      121 agatgctggg aactgaacta gggcctcagt gagaactgtg cttttaacca gtgaatcacc
      181 cagtgctacc accccacctt gcatctactt cttaagagct ggacctatag catccgtttg
      241 ctcgccgata agagggaact agaggaagag agtaataacc actgagtgag gaccgaagat
      301 ggagaaaggt gaccaggctt ccgactgtga cagtgatgaa acagtgattg aggggtcggt
      361 gacagagaac gaactggaag atgatgagct tccctggaga aggttcttga gtcaagatac
      421 aacttttaca tctgagttct gttttcattc tggtataaat ggaacacaga atggtatgca
      481 ttctcctgag attcaacttg gactgaaact cagaaaggat tcacaagagc aaaatgataa
      541 aaatgaggtg ttgcgggctc ttagtgagga cctagtgtta caggatcctc aggatgaaac
      601 aacacaaaat caagttctgt tacaaactag aaaagaattg ccagtattct ctgtgtcagt
      661 tcctcacccc gaagtttcat ggagtcacca aactactgga gggcctggag ctgaaatctg
      721 tgaacatttg ccacactcag aaaaggaact aagtgaaaac tcagattccc ctgaagttag
      781 tcttctctca gggacttctc ttatggcatc tgatttggtt accttaaagg aacaattaac
      841 agagccagtg aagaccttag cagtaccaaa cacattttct gagcctggaa agaaagtaac
      901 actgaccttg acttctatag aaaccaaaga tgaagaaagc tctcttgaaa catttgtgtc
      961 tgcattagaa aagttactag aatcaccaga atatacccaa gaagaaagac tgcttgaaat
     1021 aatgaatgac ttcagtcctc aagagttctt gacctcattg agcaattcca tgagttctgt
     1081 gtctgtccct tcgagtgcct tgtcagcagg tgatagagat gaactaggaa acaaggctgg
     1141 tgctgtgttg ccagctcaat tgctggcagc catcaacaca ttgccaggtg ctgatgtggg
     1201 acccatctgt caaggacaag agagaagcag cagtgttagt ggtggaaatg gatgtttaga
     1261 agtgcagcct gccatgtctc agaaagatga agattgtaca cacatagcac agaatataga
     1321 agacccaaaa ccatttagat tacaaacatt gactcatgaa aatgccacct cttatgagca
     1381 actaaacaaa aaggaaaatt cagattccat gaaaaacacc tctacccaga aaacacctcg
     1441 tgtactaaga agatcatcta gactggaaaa actaagagca agcagagatg tgcatacaga
     1501 tgtcatactg gagaggccag agaggatttt atcagaagca cttagctgta aggatcgaat
     1561 aaatagcata tttacaactg agaatttcag taaaaggaag aacatgcatt catccagatt
     1621 caagaatgaa cagataagga aaaatgaaca acttagaata aaaaatgaag tgaacacagc
     1681 tggaatcaat aagagaaatg ccaaaggaga aagccggctc catgtggctt ccaaaggagg
     1741 aaatctttcc ctagtgaaaa tgctaataga atctggagca gatgtgaatc tcaaagataa
     1801 tgcaggttgg acaccccttc ataaggcatc aagtggggga tttgatgata taattataga
     1861 gttattaaaa gctggtgcaa atgtgaactg tgaaaatgta gatgggattt tgcctttaca
     1921 tggtgcttct gcagggaacc atttaaaggc agctgagata ctcctagaac atggagcaaa
     1981 ccctagtcag aaagatcaga aacagaggac tgctttggat gaagcagatg atgaaaaaat
     2041 gaaagaacta ctaaaatctc atggtgctat tgagaccgct catggagaag agaggagctc
     2101 catagttcca gtaaaaattc ctgctattcg cccaaaaaga tataagcctt ttatctgtga
     2161 caatgacaaa gcagttggtt ctcctgctcc ctcacataaa gcaaagagga gtgagagccg
     2221 acctgtgcat cagaccatca gtgccattct aaaagatcta gaagaaaaac aggaaacctt
     2281 actgaagttt gagataagaa actctgaaga tgaagaacaa tacattgaaa agatgttaga
     2341 cataaaagaa gttatggata atatacttgc tcaacagaaa acagaaaggg atgatctagc
     2401 taaaaaatac agggtatcca tggagtcatt taaacatggg gccctgagag aacagctggc
     2461 taacttggcc acaagacaaa agagtctttt agttgtagca aagaaacaaa aaaagataag
     2521 actgaaaatt caaaactata agactgccac accatcatct ggtaataatt taaggaagct
     2581 gccatgtaac tcagacatct ccagtgacaa gaccagccaa gatcctcctg gagtgggaaa
     2641 ctcagctctt gcccagtcag gctcactttc tcctaacaat cttgcttata gaagtatgca
     2701 agaaatgcca ttttctccag aaatacagag tgacagccag aatactaaca tttgtttgaa
     2761 tgcagaggca ataagaggag aagaattccc tggaagtgac acaaattcta aacaaaatgt
     2821 ccaggattgt gcctcaggtg ggttattaaa atccacctca gatgacactg agaaaatgac
     2881 atcatcatcc caacctgttg ctcttacttc tcaagcagag tattcacaag cagagaattt
     2941 ttttccagaa acttcagtca aaggctatgg atttgatgct ccttcactaa caggcaccat
     3001 aaatatttca gaagataaaa gtatattttc ccaaaatgat gtctgtctac cggcttttcc
     3061 tcagaatcag ggcctttccc gttgtaaacc aaaaagaaga aacaagagaa caggttccca
     3121 acaaccatct gagggagcat ctaagcctct ggcgcagact gttgctatct tagataccta
     3181 tactgcgcgt cagacaaagc cgtgtcttaa gaaatcagct tctgttgctt tgaatgcaga
     3241 cagcatgcaa atctctcctc cctctgtgtc tgcccatcaa ccttcttcta aaaaggctcc
     3301 acaccacagc acaactccca gaaagaaaac tgtgcagctg aaagacttga ttttacttgg
     3361 aagaattaat ccaggaaata acattctgga atttaaaacc caggagacaa cccacagagc
     3421 cagtgtttta ctgagtggta aactgaaggt agaaaatggt cagatttacc agaacccagt
     3481 tacctggctc aaggatgtcc tgggaggtgg cagttatgtg acctggaatt acgcttggaa
     3541 taaggtaaca taccttggaa aggagctttt gaagtatgtt tctgaagcac ctcctgtttc
     3601 tgcagaaccg agtagcacac ctcagcagca ccagccttgc ctctcagcag gcacttccag
     3661 agagtcgatg caaatcatcc ctcattatct acagataaaa gaaatacttc taatcagcga
     3721 tcaagagctt ctgccgtgcc atgtaatgga gcagcattgg aagttctatg tggaatgtaa
     3781 gaagctatcg ttctgacgcc tgaagcttgg ctttctaggt agcttactta gcagttgctc
     3841 ttataatcac cagcccctca tctccatcgt gtaagtcaca tcttaacctg cactatgagt
     3901 tatttcctgt gataagaaaa tggttgtgtt atggtcagtt tagtgctttt tgcctctaaa
     3961 atcaagacat ttctgaataa aaccataatg agtctcc
//
