LOCUS       NM_001033698            1378 bp    mRNA    linear   ROD 10-FEB-2025
DEFINITION  Rattus norvegicus ankyrin repeat domain 16 (Ankrd16), mRNA.
ACCESSION   NM_001033698 XM_225535
VERSION     NM_001033698.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1378)
  AUTHORS   Vo,M.N., Terrey,M., Lee,J.W., Roy,B., Moresco,J.J., Sun,L., Fu,H.,
            Liu,Q., Weber,T.G., Yates,J.R. 3rd, Fredrick,K., Schimmel,P. and
            Ackerman,S.L.
  TITLE     ANKRD16 prevents neuron loss caused by an editing-defective tRNA
            synthetase
  JOURNAL   Nature 557 (7706), 510-515 (2018)
   PUBMED   29769718
  REMARK    Erratum:[Nature. 2018 Aug;560(7720):E35. doi:
            10.1038/s41586-018-0271-3.. PMID: 29925958]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC099837.1.
            
            On Sep 25, 2005 this sequence version replaced XM_225535.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC099837.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            NMD candidate          :: translation inferred from conservation
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..1378
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17q12.2"
     gene            1..1378
                     /gene="Ankrd16"
                     /note="ankyrin repeat domain 16"
                     /db_xref="GeneID:307102"
                     /db_xref="RGD:1311405"
     exon            1..394
                     /gene="Ankrd16"
                     /inference="alignment:Splign:2.1.0"
     CDS             54..1166
                     /gene="Ankrd16"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 16"
                     /protein_id="NP_001028870.1"
                     /db_xref="GeneID:307102"
                     /db_xref="RGD:1311405"
                     /translation="MAPPGDPRRLCRLVQEGQLRALREELEVAGGCWDPEMFRGSQGP
                     AGDTLLHFASRHGRQDILAYLVEAWSMDIEAANRDYKRPLHEAASMGHRDCVRYLLGR
                     GAVVDSLKKADWTPLMMACTRKNLEVIQDLVEHGANPLLKNKDGWNSFHIASREGDPV
                     ILRYLLTVCPDVWKTESKIRRTPLHTAAMHGCFEAVQELLERCHYEPDCRDNCGVTPF
                     MDAIQCGHVSIAKLLLENHEACSSATDSLGAQALHRAAVTGQDEAIRFLVCGLGIDVD
                     VRAKSSQLTALLYAAKEGQTSTVQTLLSLGADINSTDERNRSALHLACAGQHAACARF
                     LRQSGLKDSADLTGALAQQLTRGVAILQDFDPGVKS"
     exon            395..615
                     /gene="Ankrd16"
                     /inference="alignment:Splign:2.1.0"
     exon            616..658
                     /gene="Ankrd16"
                     /inference="alignment:Splign:2.1.0"
     exon            659..767
                     /gene="Ankrd16"
                     /inference="alignment:Splign:2.1.0"
     exon            768..929
                     /gene="Ankrd16"
                     /inference="alignment:Splign:2.1.0"
     exon            930..1008
                     /gene="Ankrd16"
                     /inference="alignment:Splign:2.1.0"
     exon            1009..1237
                     /gene="Ankrd16"
                     /inference="alignment:Splign:2.1.0"
     exon            1238..1342
                     /gene="Ankrd16"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaagactgg acgtgggtct tcctcttact tttgtccacc ctggtccagg gcgatggctc
       61 cgcctgggga tccgaggcgt ctctgcaggc tggtgcagga gggccagctg cgcgccctgc
      121 gggaagagct ggaggtagct ggaggttgct gggatccaga gatgttccga ggcagccaag
      181 ggccagctgg ggacaccctt ctccacttcg catcacgcca cgggcgccag gacatcctag
      241 cgtacctagt ggaggcttgg agtatggaca tcgaggccgc caaccgagac tacaagcggc
      301 ctctgcacga agctgcctca atgggccacc gggactgcgt gcgctacctc ctgggccgag
      361 gtgcagtggt ggactccttg aagaaggcgg actggactcc tctgatgatg gcttgcacaa
      421 ggaagaacct tgaggtgatc caggaccttg tagaacacgg tgccaaccca ctcctgaaga
      481 acaaggatgg ctggaacagt ttccacattg ccagcaggga aggcgaccct gtgatcctcc
      541 ggtacttgct cactgtctgc ccagacgttt ggaaaacaga gagcaaaatc agaagaactc
      601 ctttacacac tgcagcaatg cacggctgtt tcgaagcagt ccaggagctt cttgagagat
      661 gtcactatga accagactgt agagacaact gtggcgtcac acccttcatg gatgcaattc
      721 agtgcggcca tgtcagcata gccaagctgc tccttgaaaa ccacgaggct tgctcttcag
      781 ctacagatag tctgggggcc caggctctac accgagcagc agtcactggg caggatgaag
      841 ccatccgatt cctggtgtgc ggtcttggca ttgatgtcga tgtgagagca aagtcaagcc
      901 agctcacagc acttctttat gcagcgaagg aaggacagac gagcacagtt caaactctgt
      961 tgtccttggg tgccgacatc aactccacag atgaacgaaa tcgctcagcc ctgcatctgg
     1021 cctgtgcagg tcagcacgcg gcttgcgcca ggttcctccg acagtcaggg ctgaaggatt
     1081 ctgcagacct aacaggcgcc ttggcccagc aactcacgag gggcgtggct atccttcagg
     1141 actttgaccc cggcgtgaag tcataaggat gcttggagac ggaggctgcg gagtgcgtgg
     1201 tcattcacgc catgcttctt cagttgctga cggatcaatg tgctgcagta gctgtttgaa
     1261 atccccgcct ggactgccac acatttatgg aactgtgctg tgacttggca tttgtaagtg
     1321 aaataaacct ttctccaggg ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
