LOCUS       NM_001108514            2123 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus ankyrin repeat domain 13D (Ankrd13d), mRNA.
ACCESSION   NM_001108514 XM_001068648 XM_341982
VERSION     NM_001108514.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Tanno H, Yamaguchi T, Goto E, Ishido S and Komada M.
  TITLE     The Ankrd 13 family of UIM-bearing proteins regulates EGF receptor
            endocytosis from the plasma membrane
  JOURNAL   Mol Biol Cell 23 (7), 1343-1353 (2012)
   PUBMED   22298428
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473953.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_341982.3, XM_001068648.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..2123
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /note="ankyrin repeat domain 13D"
                     /db_xref="GeneID:361699"
                     /db_xref="RGD:1309156"
     exon            1..235
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     CDS             146..1963
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /note="ankyrin repeat domain 13 family, member D"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 13D"
                     /protein_id="NP_001101984.1"
                     /db_xref="GeneID:361699"
                     /db_xref="RGD:1309156"
                     /translation="MAGLGPTFPLHRLVWANRHRELEAALHSRKHDIEQEDPRGRTPL
                     ELAVTLGNLESVRVLLRHNANVGKESHQGWAVLQEAVSTGDPEMVQLVLQYRDFQRAT
                     QRLAGIPELLNKLRQAPDFYVEMKWEFTSWVPLVSKMCPSDVYRVWKRGESLRVDTSL
                     LGFEHMAWQRGRRSFIFRGQEAGALVMEVDHDRQVVHTETLGPALHEPEVLLAAMRPS
                     EEHVASRLTSPIVSTHLDTRNVAFERNKCGIWGWRSEKMETVSGYEAKVYSATNVELV
                     TRTRTEHLSDQDKLRNKGGKTPFQSFLGMAQQHSSHTAAPVQQAASPTNPTAISAEEY
                     FDPSFSLESRNIGRPIEMSSKVQRFKATLWLSEEHPLSLGDQVTPIIDLMAISNAHFA
                     KLRDFITLRLPPGFPVKIEIPLFHVLNARITFSNLCGCDEPVSSVCVPKPSSAISASG
                     SPFPCEVDPTVFEVPEGYSVLGAERSEPLRDEDDDLLQFAIQQSLLEAGTEAEQVTVW
                     EALTNTRPGIHPPPRVTVFEEQLQLEQALQESLQLSTESRGPESPQKTPPPPAPPSFE
                     EQLRLALELSSREQEELERRGQQEEEDLQRILQLSLTEH"
     exon            236..371
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            372..496
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            497..542
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            543..686
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            687..876
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            877..943
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            944..1025
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            1026..1087
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            1088..1218
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            1219..1376
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            1377..1493
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            1494..1657
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            1658..1749
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
     exon            1750..2123
                     /gene="Ankrd13d"
                     /gene_synonym="RGD1309156"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttgctgccgc ggctccttcc aggggtcggc ggggctgcag cgggtgcagg tgaggtgcgg
       61 ctcggagcgg aggcgcagta gacgtgccag gcgcaggcca agaagggctg ggccgttcac
      121 tcgggatgcg gtgctgaggc ccagcatggc cggcctgggc cccaccttcc cgctgcaccg
      181 gctagtctgg gcaaatcggc accgcgaact ggaggccgca ctgcacagcc gcaagcatga
      241 cattgaacag gaggaccccc gagggcgaac ccccctggag ctggctgtga ccttggggaa
      301 cttggagtct gtgagagtcc tccttcgaca taatgccaac gtgggcaaag agagccacca
      361 gggctgggca gtcctgcagg aggcagtcag cactggagac cctgagatgg tacagttggt
      421 actccagtat cgggacttcc agagggccac acagaggttg gctggcattc cagaactgct
      481 caacaaactc cgtcaggccc ctgacttcta cgtggaaatg aagtgggagt tcactagctg
      541 ggtgcctctt gtgtccaaga tgtgcccgag cgacgtatac cgtgtgtgga agcggggcga
      601 gagtctgcga gtagacacta gtctcttggg ctttgagcac atggcctggc agcgtggccg
      661 gaggagcttc atcttcaggg gtcaagaggc gggagccttg gtaatggaag tggatcatga
      721 ccggcaggtg gtacacacag agacactagg tccagctctg catgaaccgg aagtgctgct
      781 ggctgccatg cggcccagtg aggagcatgt ggccagtcga ctcacttctc ctattgtctc
      841 cacccacctg gacactcgca atgtagcctt tgagaggaac aaatgtggta tctggggatg
      901 gcggtctgag aagatggaga ccgttagtgg ctacgaagcg aaggtgtaca gtgccaccaa
      961 tgtggagctg gtgacacgca caagaacaga acacctctct gatcaggaca agttaaggaa
     1021 caaagggggt aagactccat tccagtcctt cctgggaatg gcccagcagc actcctccca
     1081 tactgcggct ccagtgcagc aggcagcaag ccctaccaac cctacagcca tttctgctga
     1141 ggagtacttt gaccccagct tcagcctgga atcaagaaac attggccgcc ccattgagat
     1201 gtctagcaaa gtacagaggt tcaaggcaac actgtggcta agtgaggagc acccactgtc
     1261 cttgggtgac caggtgacac ccatcatcga cctcatggcc atcagcaacg ctcattttgc
     1321 caagcttcgg gatttcatca ctctgcgcct cccaccaggc ttccccgtca agattgagat
     1381 tcccctcttc catgtgctaa atgcccgcat caccttcagt aacctgtgcg gctgcgacga
     1441 gcctgtgagt tccgtgtgcg tccccaaacc cagttctgcc atttctgctt caggaagccc
     1501 ttttccatgt gaggtggacc ccactgtgtt cgaggtgccc gaggggtaca gtgtgctggg
     1561 tgctgaacgc agtgagcccc ttcgagatga ggacgatgac ctgctgcagt ttgccatcca
     1621 gcagagcctg cttgaggctg gcacagaggc agagcaggtg actgtgtggg aagccctgac
     1681 caacacaaga cctggcattc accctcctcc ccgggtcaca gtgtttgaag agcagcttca
     1741 gctggagcag gccctccagg aaagcctaca gctgtccaca gaatccaggg gtccagagtc
     1801 tcctcagaag acacctccac cccctgctcc cccaagcttt gaggagcagc ttcgcctggc
     1861 cctggagttg tcttcaaggg agcaggagga gttggagcga cggggtcagc aggaggaaga
     1921 agacttacag cggattctgc agctgtcact cacagagcac tgagatgcct ggccactggg
     1981 gatggctccc cagggccact ccttctgcct gtttttgtaa tttatttatt tataaactgt
     2041 ctgctgctga gctttgggcc tggggcactg gaggtaggct agcagtgaga ctaaggtaga
     2101 aataaaaaga ccgtcagcag tag
//
