LOCUS       NM_001191570            4153 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus ankyrin repeat domain 13C (Ankrd13c), mRNA.
ACCESSION   NM_001191570 XM_002729125 XM_006233547
VERSION     NM_001191570.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4153)
  AUTHORS   Parent,A., Roy,S.J., Iorio-Morin,C., Lepine,M.C., Labrecque,P.,
            Gallant,M.A., Slipetz,D. and Parent,J.L.
  TITLE     ANKRD13C acts as a molecular chaperone for G protein-coupled
            receptors
  JOURNAL   J Biol Chem 285 (52), 40838-40851 (2010)
   PUBMED   20959461
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On or before Jun 1, 2021 this sequence version replaced
            XM_006233547.4, NM_001191570.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643296.8033.1,
                                           SRR26643293.15179.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-950               JAXUCZ010000002.1  249681996-249682945
            951-992             JAXUCZ010000002.1  249694612-249694653
            993-1097            JAXUCZ010000002.1  249697651-249697755
            1098-1183           JAXUCZ010000002.1  249701781-249701866
            1184-1229           JAXUCZ010000002.1  249702606-249702651
            1230-1296           JAXUCZ010000002.1  249705187-249705253
            1297-1441           JAXUCZ010000002.1  249710641-249710785
            1442-1573           JAXUCZ010000002.1  249713705-249713836
            1574-1735           JAXUCZ010000002.1  249716707-249716868
            1736-1815           JAXUCZ010000002.1  249721195-249721274
            1816-1914           JAXUCZ010000002.1  249722657-249722755
            1915-2015           JAXUCZ010000002.1  249725051-249725151
            2016-4153           JAXUCZ010000002.1  249727135-249729272
FEATURES             Location/Qualifiers
     source          1..4153
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q45"
     gene            1..4153
                     /gene="Ankrd13c"
                     /note="ankyrin repeat domain 13C"
                     /db_xref="GeneID:685374"
                     /db_xref="RGD:1595074"
     exon            1..950
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
     CDS             524..2146
                     /gene="Ankrd13c"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 13C"
                     /protein_id="NP_001178499.2"
                     /db_xref="GeneID:685374"
                     /db_xref="RGD:1595074"
                     /translation="MTGEKIRSLRRDHKPSKEDGDVLEPCEEEATAALGGAFTGGRSG
                     AGGSGKGGKACHKIFSHHHRLQLKAPTAPGPGVPAPPQHNAVTATCPAPACLGSNPVV
                     VADGGSCPSLYPVHECVFKGDVRRLSSLIRTHNIGQKDNHGNTPLHLAVMLGNKECAH
                     LLLAHNAPVKVKNAQGWSPLAEAISYGDRQMITALLRKLKQQSRESVGEKRPRLLKAL
                     KELGDFYLELHWDFQSWVPLLSRILPSDACKIYKQGINIRLDTTLIDFTDMKCQRGDL
                     SFIFSGDAAPSESFVVLDNEQKVYQRIHHEESEMETEEEVDILMSSDIYSATLSTKSI
                     SFTRAQTGWLFREDKTERVGNFLADFYLVNGLVLESRKRREHLSEEDILRNKAIMESL
                     SKGGSLTEQNFEPVRRQSLTPPPQNTITWEEYISAENGKAPHLGRELVCKESKKTFKA
                     TVAMSQEFPLGIESLLNVLEVIAPFKHFNKLREFVQMKLPPGFPVKLDIPVFPTITAT
                     VTFQEFRCDEFDGSIFAIPEDYKEDPSRFPDL"
     exon            951..992
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
     exon            993..1097
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
     exon            1098..1183
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
     exon            1184..1229
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
     exon            1230..1296
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
     exon            1297..1441
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
     exon            1442..1573
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
     exon            1574..1735
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
     exon            1736..1815
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
     exon            1816..1914
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
     exon            1915..2015
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
     exon            2016..4153
                     /gene="Ankrd13c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctctgaggga ggttcacaaa cagggtttca gcctttaagc tagagtttgt aactgctgtt
       61 gacctccttc tttgcaaagg cccagagcac cagtttagag ttctgagcct tgggtctcca
      121 accgcagggc ccgccccagc gtggaactct gtgcgagggg agcgcgggcg ctggccggac
      181 acagacgcga gcgcaggaga ggccagctaa tactcctcgg cgtttccttc ggagctctcg
      241 cgagaggagc caagggaaga tggctgcgcc gggtctttcc gagtgaggag gcggcggcgg
      301 cgccccgcgt cgtgtggtcg cgggctcttg agctgcggct ttcctcgtct gagacgaggg
      361 ccgccgcctc cgggagatgc gcgtgtcgcg gacccgcggt cgccccagga gttcatgctg
      421 cgtgcgaggc tcgcggccgc cgctctaatc gcccggcgtc gccgccgcgc cggctcggcc
      481 cgcggtgagc ctcccggacc ctgtcccgcg cgccgcggcg gcgatgaccg gggagaagat
      541 ccgctccctg cggagggacc acaaacccag caaagaggac ggggacgtgc tggagccctg
      601 cgaggaggag gcgacggccg cgctcggcgg cgccttcacc gggggcagaa gcggagcggg
      661 cggcagcggc aagggcggca aggcctgcca taagatcttc agccaccacc accggctgca
      721 gctgaaggcg cccactgcgc ccggccccgg cgttccggcc ccgccgcagc acaacgcagt
      781 gactgccacc tgcccggctc cggcctgcct gggcagtaac ccggttgtgg tggctgacgg
      841 aggcagctgc ccctcgctct acccggtgca cgagtgcgtc tttaaggggg acgtgaggag
      901 actgtcctcg cttatccgca cgcacaatat cggacagaaa gataatcacg gaaacacacc
      961 tttacatctt gctgtgatgt taggaaataa agaatgtgca catttactgt tggctcacaa
     1021 tgctccagta aaggtgaaaa atgctcaggg atggagccct ctggcggaag ccatcagcta
     1081 tggagacaga cagatgatca cagctcttct aaggaaactc aagcagcaat ctagggagag
     1141 tgttggagaa aaacgacctc ggttgttaaa agccctaaaa gagttaggtg acttttacct
     1201 agaacttcac tgggattttc aaagctgggt gcctttgctt tcccgaattc tgccttctga
     1261 tgcctgtaaa atatacaagc aaggtatcaa tatcaggctt gacacaactc tcatagactt
     1321 tactgacatg aagtgccaac gaggggacct gagcttcatc ttcagtgggg atgctgcacc
     1381 ctctgagtct tttgtagtgt tagacaatga acaaaaagtt tatcagcgaa tacaccatga
     1441 ggagtcagag atggaaacag aagaggaagt tgatatttta atgagcagcg atatttattc
     1501 tgcaacttta tcaaccaaat caatttcttt cacacgtgcc caaactggat ggctttttcg
     1561 ggaagataaa acagaaagag taggaaactt tttggcagac ttttatctgg tgaatggact
     1621 tgttctagaa tcaaggaaaa gaagagagca ccttagcgag gaggacattc tgcggaataa
     1681 ggccatcatg gagagcctga gcaaaggtgg gagcctgacg gagcagaact ttgagccggt
     1741 tagaagacag tcccttaccc ctcctcctca gaacactatt acctgggaag aatacatatc
     1801 tgctgaaaat ggaaaggcac cacacctggg cagagaactg gtgtgcaaag agagcaagaa
     1861 gacatttaaa gccactgtag ccatgagcca ggaatttcct ctgggaattg agtcattatt
     1921 gaatgttcta gaagtaatag cacccttcaa gcactttaac aagcttagag aatttgttca
     1981 aatgaagctt cctcctggct ttcctgtaaa attagatata cccgtgtttc ccacgatcac
     2041 agccactgtg acttttcagg aattccgatg tgatgagttt gatgggtcca tctttgccat
     2101 ccctgaagac tacaaggaag acccaagtcg ttttcctgac ctttagctga tcccgaagag
     2161 caagaggctt caggtggcag ggactgacct tcgttcagca gagagaacac atcagtgatg
     2221 tgatgaaaaa ctgacctcta atgaaacatc cacagcttcc tgatgtgcca ttcattcctc
     2281 tttttaaagt cacttcctgt ctgtactagt ttgacaccca gtgaccccaa gaccttccta
     2341 tgtaaagcag ctgtgagtgc tgtgatttgt ttttaaagat ttttacactt cttgttgaaa
     2401 tatatatcat atgaatatat ctatagctat atctaaaaca ctcctggacc attaacgtca
     2461 attccgtgtc ttaagagata tgaagccctt tgaaatgcgt cacctctatc aggtggcatg
     2521 tataaatgtt cctttaaact atgttttcat catcatgtat agttctgtaa tttgaatgtt
     2581 taatcaacta gaaggaatgc agttttctga ggtgaacaga gcagtggtaa ctattgaaca
     2641 gttgcattta cagcctgttg caatacattc cgagggaaca ctcctgcagg gaatgcggtg
     2701 cccccacccc gcccccaccc cagcaccttg ataacagttg catttacagc tgcagtgcat
     2761 cccaagggag tgctccctgc aggggatgcg gtgcccccag caccttcatg cagctcatcg
     2821 tggtgctctt tgtttcacct gaatcctttt tcagtggaaa ctgtttgtta ctgatcttcc
     2881 tttcatagaa cctcaatttt ttttcctaaa cttgagttta aaggtccttg ttctgttgat
     2941 aggtacggta acatgcttac agctagccct ctcctaagta tcagcacttt aaacaaattc
     3001 caaattttta aacttgcttc ctagtaagtg cacgtaagtc agattatttt taatggaata
     3061 tggatgcatt ggtgtcaatt ttaaaaaaca aaacaaaaca aagcaacgta ttttggacaa
     3121 ttatatatgt aacgctttca aaataaggta aaaacatttt atatgctaca atatatttgt
     3181 tataggctaa aagtccagaa acacctgatt gaaagttcat ttttttcttt taagtcacag
     3241 gaaaataact attgatttgt cttcagagta ttaaaatcat gcattactca tttttgcacc
     3301 taaaatttgt catttattac aagatggttt aaagaaccaa gagtgaaaat aaattagaat
     3361 aatgttcaaa tcataacagt atcatgttgt attaaagact tagctaaatg tttgtgtcct
     3421 gatgagatgt gtcatggatg cacctgtcag gttgttatag aatgtttaaa ctttgaccaa
     3481 gacttttatt gaaagatgac ttatttaaaa atccaaagtg tcagccgtaa gatatttatc
     3541 tctttacagt tgcatctcag atagtgatac cacctggcat atgttgacat tttatttttt
     3601 ataaaaatga ttgcattcaa aaaaatcaaa gccctaatca ctccagtaag tgatctgttc
     3661 agttttaaga actgagaagc ccaaagctag catgatggaa tggaagttgt ccctgccaga
     3721 cagtggctga tccagcgact tagctactca attaattctg ttgtcagtca tgaggtccaa
     3781 ggttctgaaa ggcagtgatc actgttgctt taggctcctt ggctcgaaca taaatggaaa
     3841 aatgataaat ttgcagcttg ggatttagaa tttcttaaca tgtgaatatt ttgctgggtt
     3901 acactggaga taggactgct gaaaattgtt gcactggatt gtactactga aaattgttgc
     3961 actggattgt actactgaaa attgttgcac tggattgttt tgacttcaat ttttctttaa
     4021 tgaatagtag aatcagattg tccattccaa aatgtttttt cctctgatca caaagaacaa
     4081 gtgtatctct tatgatggtg ggaaaaaagg agttaattaa tgcaaataaa cttttcacaa
     4141 tattaagact ttt
//
