LOCUS       XM_008768135            3077 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin repeat domain 13B (Ankrd13b),
            transcript variant X1, mRNA.
ACCESSION   XM_008768135
VERSION     XM_008768135.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008768135.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008768135.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3077
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3077
                     /gene="Ankrd13b"
                     /note="ankyrin repeat domain 13B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     ESTs, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 128
                     samples with support for all annotated introns"
                     /db_xref="GeneID:360575"
                     /db_xref="RGD:1564005"
     CDS             36..2087
                     /gene="Ankrd13b"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 13B
                     isoform X1"
                     /protein_id="XP_008766357.1"
                     /db_xref="GeneID:360575"
                     /db_xref="RGD:1564005"
                     /translation="MIPANASARKGPEGKYPLHYLVWHNRHRELEKEVRAGQVDIEQL
                     DPRGRTPLHLATTLGHLECARVLLAHGADVGRENRSGWTVLQEAVSTRDLELVQLVLR
                     YRDYQRVVKRLAGIPMLLEKLRKAQDFYVEMKWEFTSWVPLVSKICPSDTYKVWKSGQ
                     NLRVDTTLLGFDHMTWQRGNRSFVFRGQDTSAVVMEIDHDRRVVYMETLALAGQDREL
                     LLAASQPSEEQVLSRLTAPVVTTQLDTKNISFERNKTGILGWRSEKTEMVNGYEAKVY
                     GASNVELITRTRTEHLSEQHKGKVKGCKTPLQSFLGIAEQHGGPQNGTLITQTLSQAN
                     PPAITAEEYFNPNFELGNRDMGRPMELTTKTQKFKAKLWLCEEHPLSLCEQVAPIIDL
                     MAVSNALFAKLRDFITLRLPPGFPVKIEIPIFHILNARITFGNLNGCDEPVPSVRGSP
                     SSETPSPGSDSSSVSSSSSTTSCRACEISPALFEAPRGYSVLGGQREPSTRDEDDDLL
                     QFAIQQSLLEAGSEYDQVTIWEALTNSKPGTHPMSYEGRRQDRCPRCAGSGERSTNPP
                     RPQERPTHAAAPAHAPGSGAQPSAQPRSRLPQPHVPELRRAAAAGYGAVSSGAGGEAA
                     ASAPGGGRVGADPAALVDRTVAPPAGTLAHSTQDRGLRTCRAAAGVWSHRIGGVAAHQ
                     A"
ORIGIN      
        1 gccgggcgcc gcggccccgg catgaggagc gggcgatgat ccccgccaac gcctccgcca
       61 ggaaggggcc cgagggcaag tacccactgc actacctcgt gtggcacaac cgccaccggg
      121 agctggagaa ggaggtccgc gccggccagg tggacattga acagctggat ccccgtggcc
      181 ggactcctct gcacctggcc accacactgg ggcacctgga atgtgcccgg gtgctcttgg
      241 cacatggcgc agatgtgggc agggagaatc gcagtggttg gacagtgctg caggaggctg
      301 tgagcaccag ggaccttgag ctggtgcagc tagtgctgcg gtatcgggac taccagcggg
      361 tggtgaagcg gctggcgggc atccccatgc tcttggagaa gcttcgaaag gcccaggact
      421 tctatgtgga gatgaaatgg gagttcacaa gttgggtgcc tctggtatcc aagatttgcc
      481 ctagtgacac ctacaaagtg tggaagagcg ggcagaacct gagggtagac accacgcttc
      541 tgggctttga ccatatgacc tggcagagag ggaaccgcag cttcgtcttc cggggtcaag
      601 acacaagtgc tgtggtcatg gagattgacc atgaccgccg tgtggtatac atggagactc
      661 tggcgctggc cgggcaggat cgggagctac tgctggctgc ctcccagccc tcggaggagc
      721 aggtgctgag caggctcacc gcacctgttg tcaccacaca gcttgacacc aagaacatct
      781 cctttgagag gaataagact ggcatcctgg gatggcgcag cgagaagaca gagatggtga
      841 acgggtacga ggccaaggta tacggggcct ccaatgtgga gctcatcacc cggacacgaa
      901 cggagcatct gtcggaacaa cacaaaggca aggtcaaagg ctgtaagaca cctctgcagt
      961 ctttcctggg aattgctgag cagcacgggg gaccccaaaa tgggaccctg atcactcaga
     1021 ctctgagcca agccaatccc cctgccatca ctgcagagga atacttcaac cccaactttg
     1081 agcttggaaa ccgggacatg ggccgtccca tggaactgac caccaagaca cagaagttca
     1141 aggccaagct gtggctgtgt gaggagcatc ccttgtccct gtgtgagcag gtggctccca
     1201 tcattgacct catggctgtc agcaatgcac tttttgccaa gctccgggac ttcatcacgt
     1261 tgcgcctgcc tcctggcttc ccagtcaaga ttgaaatccc gatttttcac atcctcaacg
     1321 cccgcatcac cttcgggaac ctcaatggtt gcgatgagcc agtgccctcc gtgcgaggta
     1381 gccccagcag cgagacgccc tcccctggca gtgactcttc gagcgtcagc agctccagct
     1441 ctaccacctc ctgccgcgcc tgtgagatct cccctgcact gtttgaggcc ccacgtggct
     1501 acagcgtgct gggcggccag cgagagcctt cgactcgtga tgaggacgat gacctgctgc
     1561 agtttgccat ccagcagagc ctgcttgagg cgggcagtga gtatgaccag gtcactatct
     1621 gggaggcgct aaccaacagc aaaccaggca cccaccccat gtcctatgaa ggccgccgac
     1681 aggacaggtg tcccaggtgt gccgggagcg gggagcgctc gacaaatcct ccccgccccc
     1741 aggagcgccc cacccacgcc gcagcgccag cccatgcccc cggctccggt gcccagccct
     1801 cggcccagcc caggtcccgg ctcccgcagc cacatgttcc ggagctacga cgagcagctg
     1861 cggctggcta tggagctgtc agctcaggag caggaggaga ggcggcggcg agcgcgccag
     1921 gaggaggaag agttggagcg gatcctgcgg ctctcgttga ccgaacagta gcgcctcctg
     1981 ctgggaccct cgcccactct acgcaggacc ggggtctgcg cacctgccga gcggctgctg
     2041 gagtctggag ccatcgcatt gggggtgtag cagcgcatca ggcttgagat gccaggggtt
     2101 tgatacagga gcggagtaac tttccaggcc agagccctag aggcatggct ggtctccctg
     2161 ctttgttgta cggtgatccc taatccgctt ctctgggctc agatctgtcc aagggcggag
     2221 gcaggtggta tcgaaaagga aacgaatcct tgagaggagc attgtccccg tcccttgctc
     2281 cttatggctg gtcctccttc ttgctcactg acccctctcc aggacactgt ccctgaagcc
     2341 ttcgcatctt agctcttcat ccctgggagg cagctgatcg cccagcgtgc tgtgtcgctg
     2401 ctttgtccca gacaaaccag cacgtcaagg gcccagcccc tccccacccc ggcatttcag
     2461 cgtcaagtgc acttagcggg gtgcccagct cccccagttc ccacacctgt cctgtgtctc
     2521 agggtggtcc tcgcttctct ttaggcagcc aggaattgga atcccatgcc cgcagcacgt
     2581 ttttcttgtg atcagggagt gtgtctaagg tggccctagt ttgggcaagg cctggttccc
     2641 tcatggtgcc ttggggaatg ggggcagcat attggcttgg gggcaagcac tagactcgac
     2701 acaaaagcgt tggtgagggc cctggcacca ctatcaccgc ccaccccttc ctaccagctg
     2761 ctgctagccc tctgtggttg tgcacccttc ctgcccccat tcaggggttg actaacaccc
     2821 tttatccaat ggtgctaacc ccggctctcc ctgttctacc ctacccacct aaagaagcac
     2881 aggccccacg gagcagggcc cacaccctta tcctgggctg ccttctggct ggcttctctc
     2941 tgccaggggc tcaaaagggg cacaaacgtg ggtcaagaaa agagcaacaa cgcgaaattg
     3001 ttcttcctct tcccttccct gatgccaggg gcaccagact gattctgagg cacaaataaa
     3061 agaggtttca aaccaga
//
