LOCUS       NM_001012148            3672 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus ankyrin repeat domain 13a (Ankrd13a), mRNA.
ACCESSION   NM_001012148 XM_341097
VERSION     NM_001012148.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3672)
  AUTHORS   Tanno H, Yamaguchi T, Goto E, Ishido S and Komada M.
  TITLE     The Ankrd 13 family of UIM-bearing proteins regulates EGF receptor
            endocytosis from the plasma membrane
  JOURNAL   Mol Biol Cell 23 (7), 1343-1353 (2012)
   PUBMED   22298428
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085774.1.
            
            On Feb 11, 2005 this sequence version replaced XM_341097.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085774.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3672
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..3672
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /note="ankyrin repeat domain 13a"
                     /db_xref="GeneID:360823"
                     /db_xref="RGD:1308577"
     exon            1..216
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..1890
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /note="ankyrin repeat domain 13"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 13A"
                     /protein_id="NP_001012148.1"
                     /db_xref="GeneID:360823"
                     /db_xref="RGD:1308577"
                     /translation="MSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTL
                     LHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNT
                     SMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDIT
                     LLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKP
                     KSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSV
                     ITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGDLTTECATVNNPTAITPDE
                     YFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHF
                     ARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAAS
                     DATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPA
                     SNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAE
                     QELRLQEEEAELQQVLQLSLTEK"
     exon            217..349
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            350..474
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            475..520
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            521..664
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            665..854
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            855..921
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            922..1003
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1065
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            1066..1196
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            1197..1354
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            1355..1465
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            1466..1626
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            1627..1694
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
     exon            1695..3642
                     /gene="Ankrd13a"
                     /gene_synonym="Ankrd13"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccgctcgcc gctctcctcc cctcgctctc cgtccggtcg ggcgggcccc cgagaccccg
       61 tcgggtgggt ccaggttggt ggcaggcggg cggtcaggcc tgggtggcga cctcctcgcc
      121 atgtcctcgg cccgcgacac cagcagccgc ttcccgctgc accttctggt ctggaacaac
      181 gactaccggc agctggagaa ggagctgcgg gaccagaatg cagaggcctt ggacccacgg
      241 ggtcggacat tactgcacct cgcggtttct ctggggcatt tggaatctgc tcgagtcttg
      301 ctgcgacata aagcagacgt gaccaaagag aatggccagg gctggacagt cttacacgaa
      361 gctgtgagca caggcgatcc cgagatggtg tacacagtcc tgcagcaccg agactaccac
      421 aacacatcca tggccctgga aggtgtacct gagctgctgc acaaaattct agaggccccg
      481 gatttctacg tgcagatgaa gtgggagttc accagctggg tgcccttggt gtccagaata
      541 tgccccaacg atgtgtgtcg catctggaag agcggggcca agctgcgtgt ggacatcacc
      601 ttgctggggt ttgaaaacat gagctggatc agagggaggc ggagtctcat atttaaggga
      661 ggagacaact gggcggagct gatggaggtc aaccacgatg accgcgtggt caccaccgaa
      721 cacttcgatc tttcccaaga aatggagcgc ctcaccctgg acctgatgaa gccaaaaagc
      781 agggaagtgg agaggcggct cacaagcccc gtcatcaaca ccagcttgga tactaagaac
      841 gttgcctttg aaagaactaa atccggattc tggggctgga ggacagataa agcggaagtt
      901 gttaatggct acgaagcaaa ggtttactcg gtaaacaatg tgagcgtgat aaccaagatc
      961 cgcacagagc acctgacgga ggaggagaag aagagataca aagaggaccg gaatccactg
     1021 gagtctctgc tcggaactgt ggaacatcag tttggtgctc aaggggacct cactacggag
     1081 tgtgccactg tgaacaaccc caccgccatc acgcccgatg agtactttga tgaagacttt
     1141 gatctgaaag accgggacat tggaagacca aaggagctga cgattagaac acagaagttt
     1201 aaagctaccc tgtggatgtg tgaggagttc ccactctccc tcgtggagca ggtcatcccc
     1261 atcattgacc tcatggctcg caccagcgct cactttgcaa gattgagaga tttcatcaaa
     1321 ttggacttcc ctcctggatt ccccgtcaaa atagaaatcc ccttattcca cgtcttaaac
     1381 gcgaggatta cgttcggaaa tgttaatggc tgcagcactg ctgaagaaag gcagagcgtg
     1441 gaagggaccc aggccgagtg tgcagcttct gatgccacga acttcgaggt tgaccagtct
     1501 gtatttgaaa tccctgaatc ctatcacgtt caagacaatg gcagaaatgt gcacctgcaa
     1561 gacgaggact acgagatcat gcagttcgcc atccagcaga gcctgctgga gtccagcagg
     1621 agccaggatc tttcaggacc agcttcaaat ggaggggtca gccacgccca cagttatgaa
     1681 gcccagtatg agagggccat ccaggagagt ctcctaacta acatggaagg ccggtgcccg
     1741 ggtggcctca gtgactccag ccgtttcgat agtgacctgc gactggccat ggagctgtct
     1801 gccaaagaac tggcggaaca ggagctaagg ctccaggagg aggaggcgga actccagcaa
     1861 gtcttacagc tgtcactcac tgagaaatag acatttcatg cagggctgca gagcagaggc
     1921 tctgggagca gggagtgctg tgccagtgag aaggaccgag ggcagagggc cacacttcct
     1981 gcagacagca gccgcccttc ccttatgtag aggtgcagga ccagggactc cccagagtgg
     2041 agaagtgggc atcggcagag cccccgtctc cacgccgagg ggaggggagc accgtcacct
     2101 tccattcgct gtcctgcctg gcaggtcaca tttttactac cagctttaga cagaaacgct
     2161 gagcctgcag gctagtagac gcatcttagt cagaaatgac aagctactgc ggagtcaggg
     2221 tgctctttcc acaggacagc agccattgtg gagtgggtca gagccggagg cgtcccttcc
     2281 tgttcaccaa agaaacgggt tctgctgacc tcttagttgt ccttcctgta gggttcctac
     2341 cgcatcgcca tcatacggcc ccatctccac cttgttccac gcctttcacc ccagccaagc
     2401 ggatatgtac aggctctagt ttagattatg gctaactatt cgcatctaat taagatagac
     2461 agatgaccac ggatgttgcc ttagccttaa aaattactaa ccgtgttaag ccacctcact
     2521 tcacacactt gaggacctga tttgaaatct gtaaaggcag ttcctttggg agcagcatcc
     2581 tccaggttaa accaaaggca gctagctaat cctgtccttg gaggagcagc tagggagacc
     2641 cgtggctggg ttctcagaac gcgcaagctg gccaaaccac tggacgagcc gggctagtgt
     2701 gttctgtgcc tgctccaggc cggacttcca gtggggagag ccagctgcac ggcctggctt
     2761 cacagagggg acaggataga cctgaagcca gaaagggagc gaacatggag aagaggctct
     2821 tcatccaaaa gggaaaaatg acgactccac actgcttttt agagttcaaa tcaacatctt
     2881 tctggaaaaa atatattttt taacagaatc tttttattat ttttaaaaga tataaaactg
     2941 actactccca ttagtagcaa tacaaggtta tgcattttaa ccagactttc tcaggccgct
     3001 tttggatacc tttagtaggt aactattttg tctaaccctc ctgtaaatac ctattgcgta
     3061 acagaccaac ccctggggag tacagtcaag ggcaccttgc acctctcccc cggcgcaggc
     3121 attcaccccc atgaggctgt gctgatcccg tggtaagaca gtacccccct ctgttctgtg
     3181 tctgtttcct gttatgcttc tctggggata ggaagagaat ccaccattcc caggaatgtc
     3241 tgtttgatac agtcagtgtt gccagtaaaa tgttctgaga cacaaagaat tgttgagttt
     3301 aattcctcat agcctttttt gtcatggtct gaccaaaatc ccttccctgc acacaggcca
     3361 ccatgcgtac atttgttcca tacacaggtt ggtggtctgt tcgcttgaca tctgcaaaga
     3421 cacaaaggga gtcacggctc tgccaagcgt actccctgag ggggatccta ggtaacctct
     3481 gcgtctgtat tccgtcgctc tgctctcctg gagtctgtga ctgttcccag aagccactta
     3541 aaacgggact cagcatcaca tcgacgtgtc gcagcttttc ccatgttctc tctcaaaaca
     3601 ccaataaatc cgcttccata aagggcactc attgtcccga caaaaaaaaa aaaaaaaaaa
     3661 aaaaaaaaaa aa
//
