LOCUS       NM_001271219            2307 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus ankyrin repeat domain 10 (Ankrd10), mRNA.
ACCESSION   NM_001271219 XM_341466
VERSION     NM_001271219.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Sep 16, 2014 this sequence version replaced NM_001271219.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The  exon combination used for the transcript
            record was based on alignment to full-length mouse mRNA BC002198.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.364497.1,
                                           SRR26643297.47738.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-313               JAXUCZ010000016.1  84568599-84568911
            314-466             JAXUCZ010000016.1  84571062-84571214
            467-558             JAXUCZ010000016.1  84575855-84575946
            559-794             JAXUCZ010000016.1  84584917-84585152
            795-890             JAXUCZ010000016.1  84587435-84587530
            891-2307            JAXUCZ010000016.1  84590433-84591849
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..2307
                     /gene="Ankrd10"
                     /note="ankyrin repeat domain 10"
                     /db_xref="GeneID:361183"
                     /db_xref="RGD:1310501"
     exon            1..313
                     /gene="Ankrd10"
                     /inference="alignment:Splign:2.1.0"
     CDS             107..1354
                     /gene="Ankrd10"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 10"
                     /protein_id="NP_001258148.1"
                     /db_xref="GeneID:361183"
                     /db_xref="RGD:1310501"
                     /translation="MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHT
                     PRAHLAAEDSFYGWTPVHWAAHFGKLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGG
                     HPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTA
                     ADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDS
                     ESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNG
                     SVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMG
                     VNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHS
                     SCVRVEQRYDSAVLGAMQLHHGS"
     exon            314..466
                     /gene="Ankrd10"
                     /inference="alignment:Splign:2.1.0"
     exon            467..558
                     /gene="Ankrd10"
                     /inference="alignment:Splign:2.1.0"
     exon            559..794
                     /gene="Ankrd10"
                     /inference="alignment:Splign:2.1.0"
     exon            795..890
                     /gene="Ankrd10"
                     /inference="alignment:Splign:2.1.0"
     exon            891..2307
                     /gene="Ankrd10"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggctgcag ctcgcccatc ctttgtgttc gaatagcgtc agactcgcag gccttggccg
       61 gcacgtccct actgccgatc agtcgcgtgc ttcccagcga cccaacatgt cggcgggagc
      121 gggcgcgggc gtggaggcag gcttctccag cgaggagctg ctgtcgctcc gcttcccgct
      181 gcaccgcgcc tgccgcgacg gggacctggt cgcgctctgt tcgctgctgc cgcacacgcc
      241 gcgcgctcac ctggccgctg aggactcctt ctacggctgg acgcccgtgc actgggccgc
      301 gcacttcggc aagttggagt gcttaatcca gttggtaaga gcaggagcct cactgaatgt
      361 ctcaaccacc cgctatgccc agaccccagc ccacatcgct gcttttggag gacatcctca
      421 gtgtctggtc tggctgattc aagccggggc caacattaac aaaccggact gtgaggggga
      481 aactcccatt cacaaggcgg cccgctcagg gagcctcgag tgcatcagtg ccctggtagg
      541 caacggggct cagactgacc tgagaaatgc cagtggcctg acagcagcag acattgcaca
      601 aacccagggt ttccaagagt gcacccagtt tctcttgagc ctccagaacc atcaaatgag
      661 ccgtttctgt cctaatggca ccttgagtgg aggtcatgag aacatacttc ccaatcacat
      721 taacctggga accaatcgaa agagatgctt ggaagactca gagtctttgg gagtgaagaa
      781 agctagaacc agagttccaa gcctggatca caccatgcct ctagcaaatg gtgatgctga
      841 agacgacgct gacaggatgc acgttgacag agagtttgcc gctgtatcag atatgaaaaa
      901 cagtagctcc gtgttgaata cactgacaaa cggaagtgtc atcaatggac atttggactt
      961 cccctgcgtg gcccagctca atgggatgga gagcaggagt gacccgtgct tgacaggatc
     1021 taatggaatt agcaatggac agccatttcc cagtggccag ggccctgtct gtgctaatgg
     1081 gactgaggag ccagaaaaga ccatgggcgt taacccggag atgtgtgggt ctctccatct
     1141 gaacgggagc ccaagtagct gtgtggccag cagaccatct tgggtggggg acatagggga
     1201 gagcctgcac tacggacact accatgggtt tggggatact gcagagagca tccctgagct
     1261 gagcagtgtg ctggagcact caagctgtgt gcgggtggaa cagcgctacg atagtgccgt
     1321 cttgggcgct atgcagctgc accacggctc ctgagcccgg gcctacctca gttcctctgc
     1381 agtaccagcc tgaggaaaac tgcacagcct gtgctatagg tgcctccgct ttctgagagc
     1441 ccttggattc attcacatgg ttcccccgag tgaggctgtg tgcagaggct tagagacatt
     1501 tctcatgggg tggcaggtct cctgcaaggt acccttggga ggcttttctt gtttgacacc
     1561 agcccccttt tttttcatgt catgagacat tgccaccttt tttgtgaact ttttgatcag
     1621 gacaatttgg gcatcatttg acccttattg tttgctgtag catcctgatt acacagctac
     1681 tccctgtgca aggagcaccc ttacagcagt gtcgtgcaga ccctgggaag gggactgtcc
     1741 ttcgccactg acactgctgc aggtgcactc agtggttggg gtgtgatagc cccttccctg
     1801 tatcgaccgc tgcctgcgtt tccttaggaa caacctctgc ccaagatgga ttagggtctt
     1861 gtttttactc cacatttata cttgatctct agactttacc acagacagtg gttttcttta
     1921 tatacagtgg atgttgctgt ttgtaggagc tgttgagtca gaatacttta ctatggtaaa
     1981 atatttacta tttttttgtt actgtttttt gaggttttct gcttaaatat ataaatatat
     2041 atatcactat ccagttaatg gagagaactt gagtttctct tattaaagct gcattaaatt
     2101 catggtttta tagaaattag cttttgttta ggcaactagt ggttatactg cagatacccg
     2161 atgacttctg atttttgtaa taattgaata actgtcagtg cagataaatg gagatgacaa
     2221 agccagtgtg tactatcagg agtgtattat cattttgttt tcaagctgtt ctttacaaat
     2281 ggaataaaaa agaaagctca ctgctga
//
