LOCUS       XM_006252959            2555 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin repeat and LEM domain
            containing 1 (Ankle1), transcript variant X2, mRNA.
ACCESSION   XM_006252959
VERSION     XM_006252959.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006252959.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2555
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2555
                     /gene="Ankle1"
                     /note="ankyrin repeat and LEM domain containing 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 108
                     samples with support for all annotated introns"
                     /db_xref="GeneID:361122"
                     /db_xref="RGD:1308184"
     CDS             96..1634
                     /gene="Ankle1"
                     /codon_start=1
                     /product="ankyrin repeat and LEM domain-containing protein
                     1 isoform X1"
                     /protein_id="XP_006253021.1"
                     /db_xref="GeneID:361122"
                     /db_xref="RGD:1308184"
                     /translation="MADASSLSLQLLAALREEEARAVEKLLRLGADPNLVLDDGAAAV
                     HLAARASHPRALHCLRMLLRWGADPNARSAEALTPVHVAAAWGCCSALELLLSRGGDP
                     TLRDQDGLRPLDWALQQQHHNCARVLRELDTPTRKPNETPKPTAGSPGASQDSELHMH
                     RAELEVEAVEVAVQPQSPEATESSDYSSDASFVTAVEDSLQPRRPGGICELMASLWVT
                     RGAASAGEGAPNCQSQALTLTEKSTDKPLLLGDGDLGALHPHGSVPPMSDLQLLQALR
                     ALGYSPGPVTPFTRGHYLRRLQEAQASPGHSPELAEALRTGTVPDCQVDEAALAQHFQ
                     RPDPSRKWREGITKSSFTYLLLDPRLTKDLPARASSLTLAQCLQCFVRAIFYVGKGTR
                     ARPDAHLWEARGYHDQPRKQVCPKIRRILDIWDSGRGIISLHCFQHVVAVEAYTREAC
                     LLDALGLQTLTNQKQGHYYGVVAHWPLPRRRRLGVYLLQRALLVFLAEGERELRPQDI
                     QARG"
ORIGIN      
        1 tgggcggggc cagaagcaga gacaggcggg gctgcgcgtg cgtagacggt tgccgcgcga
       61 atttgaactg cggagggcgg tgactcctgc gggacatggc cgatgcttcc tccctgtccc
      121 tgcaactgct agcagcacta cgcgaggagg aggcgcgggc tgtggagaag ttgctgcgcc
      181 tcggggcgga ccccaactta gtgctggacg atggcgcggc ggcggtgcac ctggcggcca
      241 gagcgagcca cccacgcgcc ctgcattgcc ttagaatgct tctgcgctgg ggcgcggacc
      301 ccaatgctcg gtctgcggag gcgctgacgc ccgtgcatgt ggctgctgcg tggggctgtt
      361 gcagtgcctt ggagttgctg ctgagcagag ggggtgaccc cacactgcgg gaccaggacg
      421 ggctcaggcc cttggactgg gcactacagc agcaacatca caactgcgca cgcgtgctgc
      481 gggagctgga cacgcccacc cgaaagccga atgagacccc aaagcccaca gcagggtctc
      541 ctggagcctc gcaggactcg gagttgcaca tgcatagagc tgagctggaa gtggaggccg
      601 tggaggtggc tgtgcagccc cagagccctg aggctactga gagctcggac tacagcagcg
      661 atgcctcatt tgtcaccgca gtggaggact ctctgcagcc caggcgccct ggggggatat
      721 gcgagctcat ggccagcctg tgggtaaccc gtggggccgc atcagctggg gagggggcac
      781 ccaactgcca gtcacaggcc ctgacgttga ccgaaaagtc cacggacaaa cccttactgc
      841 ttggtgatgg ggatctggga gccttgcacc cccatggctc cgttccccca atgtccgacc
      901 tgcagctcct tcaggccctt cgggctctgg gctatagccc tggacctgtc acacctttca
      961 cccgaggaca ctacctgcgg cggctgcagg aagcccaggc tagccctggg catagcccag
     1021 aactggcaga ggcactaagg actggtacgg tccctgactg ccaggtggat gaggcagccc
     1081 tggctcagca ctttcagcgg ccggatccat cgaggaagtg gcgggaaggc attacaaagt
     1141 ctagttttac atatctactt ctcgacccca ggctgacgaa ggacctgcct gcccgagcct
     1201 cttccctcac actggcccag tgtctgcaat gttttgtgcg agccatcttc tatgtgggca
     1261 aggggacccg tgcccggcca gatgcccacc tctgggaagc ccgtggctac catgaccagc
     1321 caaggaaaca ggtctgtccc aagatccgcc ggatcttaga catctgggat agtggccggg
     1381 gcatcatctc tctacactgc ttccagcatg tggtggccgt ggaggcatac acgcgggagg
     1441 cttgcctgtt ggatgcccta ggtctccaga cactgaccaa tcagaaacag gggcactact
     1501 atggagtagt tgcccattgg ccacttcctc ggcgtcggcg attgggcgta tacctgctac
     1561 agcgtgctct gctggtcttc ctggctgagg gggagagaga gctgaggcca caggacattc
     1621 aggctcgagg ctgagtgctg aggatgtgac tgaatcctga gccatcaagg aaagcgctca
     1681 gcaggatctg tgagcacacc aggaagtcct atttgctatc tactcttcag tcccacccag
     1741 gaggatgccc aagatggcct gtcacgtccc aaggtattca ctcactcact caacacctat
     1801 taagaaccta caatatgctc agaacttctt gaccttggct cttatgtcat ttggggttgg
     1861 gtcattggta tgggggcatc atctgtgttg tagggtgctg gacaccatcc ttgggtcccc
     1921 acatcctccg caggatgcca gggaaactct gccctcctcg cccagaaggc tgcccacctg
     1981 tcttgggcca catctccctg gaagccccac tgagaaagaa cagtccctct ccaggtgctc
     2041 agacaaaggc cagataacat gcccacagga agcacaacca tccaaggcca cactatccag
     2101 ctggaagtcc cactgagaac agtcagtccc tcttcagagt gcccaggtga ctgccctgtc
     2161 ctggcaaagg ccattcaccc attgactatg cccattcata aactgtacct gcataaattg
     2221 agcccaatga agctcgctgc ccagaaacca tgctcatcca taaatgaaga gtggaggaga
     2281 ccttgtcccc tggattcttc acacacttca ggccatgact tctggctgct atgtctcggg
     2341 ctctcctggc tgctgcttca tcaggggtgg cttcaaaaaa ccagcaaaac cgtcgcaagt
     2401 gctagtgaag gctaattgtg atcctaggcc atctctcccc ctaaccccca ccacacacac
     2461 accctctaaa aaacccaagc tttctctgtg taaccctggc tgtcctggaa ctcagtctgc
     2521 ctcctgagtg ctgggattaa aggcatgcac tcctg
//
