LOCUS       XM_006243300            7177 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin repeat and death domain
            containing 1A (Ankdd1a), transcript variant X1, mRNA.
ACCESSION   XM_006243300
VERSION     XM_006243300.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006243300.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006243300.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7177
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7177
                     /gene="Ankdd1a"
                     /note="ankyrin repeat and death domain containing 1A;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 ESTs, 4 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 9 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:100362785"
                     /db_xref="RGD:1586052"
     CDS             1344..2873
                     /gene="Ankdd1a"
                     /codon_start=1
                     /product="ankyrin repeat and death domain-containing
                     protein 1A isoform X1"
                     /protein_id="XP_006243362.1"
                     /db_xref="GeneID:100362785"
                     /db_xref="RGD:1586052"
                     /translation="MEEELSWETHGLLPLERQLHEASRNNQVGKMKELLGKRVNIRAR
                     NHVGRVALHWAAGGGHEQAVRLLLEHGAAVDDVDSFGMTALLLSAWFGHLQIVQILVN
                     AGARVHWESKDGLTLLHCAAQKGHMPVLAFIMEDLEDVALDHADKLGRTAFHRAAEHG
                     QLDALDFLVGSGCDHSVKDKDGNTALHLAASQGHMDVLQRLVDIGLDLEEQNTEGLTA
                     LHAAAEGIHADCVVFLLSAGSNVNALTQKGLSCFHYAARSGSEDMSRALVKAGGRTDV
                     ADKQGTTPMHLAVKHNFPGLVQLLIEAHSDLDAMDIRQQTPLHLAAEHAWQDVAEMLL
                     IAGADLSLRDKQGKTALAVAARSNHISLVDMIIKADRFYRWEKDHLSCRDDSDLSRKN
                     LTFKQDHRQETQQLRSVLWRLASRYLRPNEWKKLAYSWQFTEAHVCAIEQQWTGTRSY
                     QEHGHRMLLIWLHGVATAGKNPSKALFEDLMAIGRRDLAESTRKMANGEPTAPRRCTV
                     M"
ORIGIN      
        1 ggggggaggg gtgggattcc tagattaaag gagaagcaag gggtgaggat accgctccat
       61 ggaagagcat ttgaccacca tgtgtgggag acctgagttc aatctgaagc gttcagggtg
      121 ggctggtggg aaaaaagcca aaggacattg tgataaacca ggcaaagaaa ggcaaatgca
      181 tgtgtttcct tttatgtata agatacaaag ttgattttaa agcagagaca aagaatgtgg
      241 tcctgcagcc tagagagacc atggaaaggg aggtatgaga gaagaccgtt aatgggcaca
      301 gagctgcagt ttgatagggg gatttattta tttatttatt tatttatcca cttattgata
      361 gatttattat taacaataaa caaaggaggg aaaatttttt ttgtttcttt ttagtattaa
      421 attacaggaa aataagccca aagcatgggt ctagtgtgat ttgactgtca tggaattata
      481 agattgtgat catgctctaa taattaaagg ctacatccat gtggagaagt ggaggatgtt
      541 ggtgacacag ttaacactgg gaattgaccc ttcagctagt ctccaaaaag aatgacaggg
      601 aatgagcctg ctgaggggaa agggttggga cagcattctg cccagaaagg aatagcagtt
      661 ttttagaccc ttaggcagca cggagggtgg ttcattttgc tggaggaatt tttacaatgt
      721 taatttcatt aatttgttta gctttcattt attttacttc cttcgggtta aaaagtcttt
      781 cccctccttt ctgccagtcc gggattccag aatgccagcc ttaggctgtt gcccctagca
      841 gagcactctc gctgggacag ctgcaccttc tgctctggca tctggcactg cttagccttc
      901 tccgcgtttc tgtttgattg cgtttggttt tggccaatct aagtaatgta attgatatct
      961 tatttttgtt gtaacccgat ttttctgatc gtgaataaat cttttgtcct atgtctgtag
     1021 gcttggtgag gtagtggggg tctgaagtgt ccaaagtggg agggcctgtt gaggcatcaa
     1081 ggttgggagg gtcccagggg agctgcgtgc aggggacctg gggcagcttg aaggcacaga
     1141 tcgggggtgg aagctgcggg tactcgggtc ggattcacag atgggttgag agcaagcaag
     1201 agctacagag agctaccgaa ttaccccccc ccccacacac acacacacac ccgcccctcc
     1261 acccgctctg cgcgctcccg gttctgagct ctcctcgccc tggcaactaa gcatctagca
     1321 agggcgcagc gcggaacagc agcatggagg aggagctgtc ttgggagacc cacggcttgc
     1381 ttcccctgga gagacagctc catgaggcct cacgaaacaa tcaggtgggg aagatgaagg
     1441 agctgcttgg gaagagggtt aacatcaggg ctagaaacca cgtgggcaga gtggccctac
     1501 actgggctgc aggtggtggg cacgagcagg ctgtgcggct gctcctggag cacggggctg
     1561 ctgtggatga cgtggactcg tttggaatga ccgcactcct cctgtctgcc tggttcggcc
     1621 acctgcagat tgtgcagatc ctggtcaatg ctggggccag ggtccactgg gaaagcaagg
     1681 atggtttgac cttactacac tgtgctgctc agaaaggcca catgccagtg ctagccttca
     1741 tcatggaaga cctggaggat gtggccttgg accatgcaga caagctggga agaacagcgt
     1801 ttcacagagc tgctgaacat ggacagctgg atgctctgga cttcctcgtg ggttctggct
     1861 gtgaccacag tgtcaaggac aaggacggga acacggccct gcacctggct gccagccagg
     1921 gtcacatgga tgtgctacag agacttgtgg acattgggct agacctggag gaacagaaca
     1981 cagagggcct gactgctctg catgcagccg ctgaagggat ccatgcggac tgtgtggtgt
     2041 ttctcctcag tgctgggagc aatgtgaatg ccctcaccca gaaagggctg agctgcttcc
     2101 actacgcagc ccgcagtggc tccgaggaca tgtcccgagc acttgtcaag gcaggagggc
     2161 gcacagatgt ggctgacaag cagggcacca ctcctatgca ccttgctgtg aagcacaact
     2221 tccctggcct tgttcagctc ctcatagaag cccacagtga tctggatgca atggacatta
     2281 ggcagcagac tcccctccac cttgccgccg agcacgcctg gcaggatgta gcagagatgc
     2341 tcctcattgc tggagccgac ttaagcctga gagataagca agggaaaaca gccctggcag
     2401 tggctgcccg tagcaaccac atcagcctgg tggacatgat cataaaagct gatcgtttct
     2461 accgatggga gaaggaccac ctttcatgca gggatgacag tgacctctct aggaagaact
     2521 taacctttaa gcaagaccat cggcaggaga cgcagcagct ccgctccgtg ctttggcgac
     2581 tagcctcccg gtatctgagg cccaatgagt ggaaaaaact ggcctattcc tggcagttca
     2641 cagaggctca tgtctgtgcc attgagcaac agtggacagg aactaggagc taccaggagc
     2701 atggtcaccg gatgctgctc atctggctgc atggtgtggc cacagctggg aagaacccca
     2761 gcaaagcact gttcgaggac ctcatggcca ttggcaggag agacttggca gaaagcacca
     2821 ggaagatggc aaacggtgag cccacggccc ccaggaggtg tacagtcatg tgagcttctg
     2881 gaacgcctgg agactacctg cacggaagag gatgtctata agggctttcc gggcagcctc
     2941 tgcacacaga cctccagctg ccgctaccga acatggagcc cagcaggaaa tgccagcact
     3001 ttttgaagga tgggccatgg gtctattcta ggttttctgg gtcatcgtgt cccaggagtg
     3061 tggcccttct ttctagctct cgacttattt tgttgtgttc gtgagggtgc atatgtatgt
     3121 gcctgtgtca cgggcgtgtg gaggccagag gacgcttggt ggggtattcc tccccaggca
     3181 ctgtccatct tggggttttc tttttgttgt tgttgtttga aacagtctgt ctgtatgttc
     3241 ccagcagtca tggaatacct tgtgtttttg aggcaaggcc tctcattggc ttaactagtc
     3301 tgactggcca gtgagcccag tgaccctcct gctttgtctc tctgtgcccc ggttttgatg
     3361 tgggttctga ggatcaaact cagttcctca ggttgcatgg ccaatgctgt accaactgag
     3421 ctcttctccc caagcctctc cgctcattct caccgccagc catcaccgta gagcatcggg
     3481 aagcacccct gaggtctgta cagccaggga ggaaaaacag cttacccagg tcattccaca
     3541 attcaagcta cgtcaaacca gcagccctcc aaccccagcc tgcaggaagg gcctcattca
     3601 ttcaaactgg acagtcctta actcatcaag gacaactcag tgctccctag ggctaggcag
     3661 acaggagctg cccagctgat tccacagctg tttgcattta gtgcatttgt ataatcgaga
     3721 gcccaggagg caggcgctct gctgctcttc cctctgatca ggaaattgga tatatgatgg
     3781 gatatataac tttttaagtg tttctttggt cttttttatc ttgaagtcac ttcagactta
     3841 caaaaaagat tgcaaaatag aactgagaat gttcaagtgt tctgcacaca gcctctctaa
     3901 acatcaactc ttgcataact actgtgtgga tttgtaaacc caggaagtta gaggtgggag
     3961 aggtggctcg gtggttgaga gcattgttct tgcagaggac tctgagatca gttccctgca
     4021 cccatatggc agcttagagc tattcatagc cctcacccta ggtgatctga cactctcttc
     4081 tggcctccaa tgttactgct tgtacgtggt ggtggtggtg gtggtgtgtg tgtgtgtgtg
     4141 tgtgtgtgtg tgtgtgtgtg tgtgtgcaaa cattcatata taaaaaaact tttctaaaat
     4201 ttaggaaatt agcagtttat aaactactca ttaatctcaa accatattca aattttgtca
     4261 atgttctgtc acctcttagg atcacagatt acatttagac atttgtgttg ctattctgtt
     4321 tctttggtgc tgacatatgc taaataccgc tataccaccg agtttacaac ttcagtcttt
     4381 gcttttgctt tagatagggt ctctccaggt agcccacgca ggcctcaaac ttgagatttt
     4441 cccactctag cctcccaaat atggagatta taagacatac acgaccaaac acccctggcg
     4501 taacttttac ccatttattg agtgtgtcac acctgtggag gtcaaaggat aacttggcag
     4561 agttaattct ctcccttgac cttgtgggtc ctggggttgg agtcaggtca tcagacacga
     4621 gggcactttc acccactgag ttgtctgctg ggcccctcct ccctctcata aaagatttta
     4681 gatttaaaat gtttcttttc tgtctgtttt gcatgcttgt atatatgcac accatgtaaa
     4741 tggttggtac cctaagaggt cagaagaggc atcagattct ctgaaactgg ggttccagag
     4801 ctcatgaacc agtgtgggtt ttaggaacag aacccaggtc ctctgcagga gcaacaaagt
     4861 atccttaact gctgtgccat ctctcagccc tcgtcttagt cccaacaaga gggctctggg
     4921 acagcatgcc cagttaaaca tgctgaatcg tcaggatagt tcctagctgc acatccagga
     4981 tggacccact ggccattgtg gctacggagc agtaggtatg gccgggaact gaattctcag
     5041 ttttatctaa gtttttgtct tcccccaacc cctgagacag agtctctctg tgtagccctg
     5101 gctatcttag aactctctgt gtagaccagg ttggtctcta actcacagag aactgcctgc
     5161 ttctgcctcc ggaatgctgg gattaaaggt gtgtgccacc actgtacagc ccatgttatt
     5221 tagttttaac tattgaaaaa aatagtggta gttttgtttt tccatttttt tttctttttt
     5281 ttttcggagc tggggaccga acccagggcc ttgcgcttgc taggcaagcg ctctaccact
     5341 gagctaaatc cccaaccccg tttttccatt ttttaatagt actggggttc atgataggca
     5401 tgaattgtac ttatacccca atttatctga attttaagca agcaaatggc aagcttcctg
     5461 gacagcagag ctagactgca gctttactct gaagtgtcag gcaagcacag ctcgtgtgtg
     5521 tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgcaccag taggaaaatg tggttccagg
     5581 ggctgtgact ccggaagtgt ggttgtctac catgagtcag acgctgtgag acaacctact
     5641 agtggtcgcc agagggactg cggtctcagg aggacacagc tcagaagagc agcacagttc
     5701 tccgctgggc aggagacaga atggaagcag gtggacctgg aagaggcttt ggtcgtcgca
     5761 ggtggccgtc cctcccccct ggtctagtcg ccactttctt tcctgtcctc cccaccttcc
     5821 tcccttcctt ccttatttta atctaacagt ccctctttcc ttccatccct ccctccattt
     5881 ctcgcagact tatttccata ctgtgttata tacaggggta tacagatata ctttttttta
     5941 gacaaggtct cattacatag ctcttgctgg ccctgaactt gctgtataaa ccaggctggc
     6001 ttcaaacttg ggaagaagct ttgtgccttc gcttcccaag tgctgggatc acagctatgt
     6061 atgcaccaca gcacctgtcc aacacaaaca tacaatctag gctgttaaaa tacaatctag
     6121 actcctgtcc cactaaacac acagaaaaac cgttagctct tccaggtttg aggctgggtc
     6181 tccccagatt ggtgccaaaa aagaaccatc tcttcatggc ataagaaaca gctgagccag
     6241 cagcattccc aggacccgag gggaggaaag aagaaagaaa taactggagg gtggtgggat
     6301 tctagcccaa cttccagaag gcctgactgg ctctagacct ctgggatggg agtaagtctg
     6361 gacccatagt tggagctagg tccaatgtcc gtgttccctt agaacccatg gaccttggat
     6421 gctctcttac tgagtgggcg ctggtgtcag aagctggcac tgtccgtgca gtgaggtgct
     6481 gctccggggc ctgccatacg gttatggttg ctgttgaact ctaacttttc tttttaagtg
     6541 ggtaacctca cagttgctgc tccagaccca gctggtgccc cgtgggctga ctgctcccct
     6601 cccttgctcc tcattgcctg acagtgcagc ctctcaggcc acacactgag ctgcagggtt
     6661 caggccaggg cacagaggcg caggtgtgca gcccagtgtg acagtcaact gcagccgaag
     6721 atgccgatgc aaggagcctt cccagcctgc acggtacaca ggaggtcttc ctgttgtccc
     6781 aaacagggac cttgtctccc tatgtagccc aagttggtct caaactccct tttgtcctgc
     6841 agcaatccct gggtgctgca attacagggg tcacccactc accttgcctg aagttcttta
     6901 tctccatggc acttccaaac gtttataact tttttcccaa ataaaacaac caattgtctt
     6961 ctagagattg ttaaaataaa aactgctttg tctgcacaac ggaatagtac atggtggtga
     7021 aacagagact acatattgtt atggaaggag cttcaagatc aattcagtga aaaagaaatc
     7081 aagttatgga tcaatgtgta actgcttact gctcgacaac agaaagtgtc tttttatctg
     7141 tagatgtttt tataaataaa agctagaaga aagctca
//
