LOCUS       XM_039098848            8065 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin 3 (Ank3), transcript variant
            X14, mRNA.
ACCESSION   XM_039098848
VERSION     XM_039098848.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8065
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8065
                     /gene="Ank3"
                     /gene_synonym="ANK-3"
                     /note="ankyrin 3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 69 ESTs, 4
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 1 sample with
                     support for all annotated introns"
                     /db_xref="GeneID:361833"
                     /db_xref="RGD:620157"
     CDS             1136..6481
                     /gene="Ank3"
                     /gene_synonym="ANK-3"
                     /codon_start=1
                     /product="ankyrin-3 isoform X13"
                     /protein_id="XP_038954776.1"
                     /db_xref="GeneID:361833"
                     /db_xref="RGD:620157"
                     /translation="MAHAASQLKKNRDLEINAEEETEKKKKHRKRSRDRKKKSDANAS
                     YLRAARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDA
                     ATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLL
                     DNGASQSLATEDGFTPLAVALQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAA
                     ALLLQNDTNADIESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVAS
                     KRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNG
                     LSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKAN
                     PNAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVS
                     QLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISAR
                     LGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVAAFLLDHGASLSITTKKGF
                     TPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASP
                     HAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSL
                     LLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHY
                     GNIKIVNFLLQHSAKVNAKTKNGYTPLHQAAQQGHTHIINVLLQNNASPNELTVNGNT
                     ALAIARRLGYISVVDTLKVVTEEIMTTTTITEKHKMNVPETMNEVLDMSDDEVGKASA
                     PEKLSDGEYISDGEEGDKSTWFKIPKVQEVLVKSEDAITGDTDKYLGPQDLKELGDDS
                     LPAEGYVGFSLGARSASLRSFSSDRSYTLNRSSYARDSMMIEELLVPSKEQHLPFTRE
                     FDSDSLRHYSWAADTLDNVNLVSSPVHSGFLVSFMVDARGGSMRGSRHHGMRIIIPPR
                     KCTAPTRITCRLVKRHKLANPPPMVEGEGLASRLVEMGPAGAQFLGPVIVEIPHFGSM
                     RGKERELIVLRSENGETWKEHQFDSKNEDLSELLNGMDEELDSPEELGTKRICRIITK
                     DFPQYFAVVSRIKQESNQIGPEGGILSSTTVPLVQASFPEGALTKRIRVGLQAQPVPE
                     ETVKKILGNKATFSPIVTVEPRRRKFHKPITMTIPVPPPSGEGVSNGYKGDTTPSLRL
                     LCSITGGTSPAQWEDITGTTPLTFIKDCVSFTTNVSARFWLADCHQVLETVGLASQLY
                     RELICVPYMAKFVVFAKTNDPVESSLRCFCMTDDRVDKTLEQQENFEEVARSKDIEVL
                     EGKPIYVDCYGNLAPLTKGGQQLVFNFYSFKENRLPFSIKVRDTSQEPCGRLSFLKEP
                     KTTKGLPQTAVCNLNITLPAHKKAEKADRRQSFTSLALRKRYSYLTEPSMSPQSPCER
                     TDIRMAIVADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGK
                     NATTDALTSVLTKINRIDIVTLLEGPIFDYGNISGTRSFADENNVFHDPVDGWQNETP
                     SGSLESPAQARRITGGLLDRLDDSSDQVRDPITSYLTGEAGKFEANGNHAEVIPEAKA
                     KAYFPESQNDIGKQSIKENLKPKTHGCGRAEEPVSPLTAYQKSLEETSKLVIEDAPKP
                     CVPVGMKKMTRTPADGKARLNLQEEEGSARSEPKQGEGYKVKTKKEIRNVEKKAH"
ORIGIN      
        1 agtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtatttgat tccctactta
       61 ggagatctct tcccgtgcac attcagaaga caccggcctc tccgaaccat gctgcttcac
      121 ttctcacaat gaatattcag aggctgcagt cacggaggac tcaggtccta ctaatactag
      181 cgtgatgaca acgcgaccta gcccgaaagc cactctgatg gaaacactga tgatggtccc
      241 cctgcccctc acactgcagt agagtcccgg ggaacctctg aattgggcat ctgtccttcc
      301 caacagtggg ctcacgcctt tctggatagt gtgttgtcat gagcatgttg ttttaaaaag
      361 acaacagacc cttctgtagt cctctccgca aaatgtatca ggactaactg ggcataatgg
      421 atgccctgtt gagaccagca atgcatgcat tgtttgcctg aaaattcgct cagcgtctcg
      481 ctgggggaaa gtggctgatt tattttatat attttgccac catcagcagt tgaactcaag
      541 ctgctccgtt ctctgaaggg ttaattttcg ctccgtgcgg atctaggctg atggataaat
      601 tgcagcgctc tctctctctc tctctctctc tctctctctc tctctctctc tctctctgtc
      661 tcttgtggag gattctgaag tcgtttcttc aggattagtg ctggcttctc agctgccgcc
      721 tgtgtggtga ctccgggtcc ttcccttcta caagagccac ccttcgcagc gttccccctt
      781 cgaaggaatc acttagacac ttccagctgg tggcagggga tgcggccata acacagctcc
      841 tccggtccca gctacgtcca ctacagcctc tgcatcagga tggctgccct ctccgcgaga
      901 ggggaaggct cagcaaggtg taggatgaaa cccggcccct gctgtggtgg gttttgaaag
      961 ctgcggtttc ctcagcatct ctgcctctct gcctcttgga cgcttccttg cctttcagct
     1021 caggctcctc tcctgtgagg gctatgctgc tctatgcctg actagaggta ctcaaggaga
     1081 tcaccttttc agagaaagct ctgcgtgctt gacagggtct ttttttccat gcattatggc
     1141 tcatgccgcc tcccagttaa agaaaaacag ggatttagaa atcaatgcgg aagaagagac
     1201 cgagaaaaaa aagaagcacc gtaaacggtc ccgggatcgc aagaaaaagt cggatgccaa
     1261 tgcaagttac ttgagagcag ctcgggcggg gcacctggaa aaggcccttg actacatcaa
     1321 aaatggagtg gacgtcaaca tctgtaacca gaatgggttg aatgcgctcc atcttgcttc
     1381 caaagaaggc catgtggaag tggtctccga gctgctgcag agagaagcca acgtcgatgc
     1441 agccacaaag aaaggaaaca cagccttaca catcgcatcc ttggctggac aagcggaagt
     1501 ggtcaaggtc ttggttacga acggagcgaa cgtcaacgca cagtctcaga atggcttcac
     1561 gccgctgtat atggcggccc aggagaacca cctggaagtc gtcaggtttc ttctggacaa
     1621 tggtgccagc caaagcctgg ctacagagga tggcttcacg ccattggccg tggctcttca
     1681 acaaggtcac gaccaagtcg tatccctcct gctcgagaac gacacgaagg gaaaagtgcg
     1741 cctcccagcc ctccacatcg cggcccggaa agatgacacc aaagcggcag ctctgctcct
     1801 acagaacgac accaatgcag acatagagtc aaagagtggc ttcaccccac tccacatagc
     1861 tgcccactac gggaatatca atgtggccac gttgctgtta aaccgagcgg ctgccgtgga
     1921 cttcaccgca cggaatgaca tcactccttt gcatgttgcc tcgaaacggg gaaacgcaaa
     1981 tatggtaaag ctgttgctcg accggggtgc gaagatcgac gccaagacca gggacggtct
     2041 gaccccgctg cactgcgggg cgagaagtgg ccacgagcag gtggtagaga tgttgctgga
     2101 cagagccgcc cccatccttt cgaaaaccaa gaatggactg tccccactgc acatggccac
     2161 acaaggagac catttaaact gcgtccaact cctcctccag cacaacgtgc ccgtggatga
     2221 cgtcaccaac gactacctga ccgccctcca cgtggcggcc cactgcggcc attacaaagt
     2281 tgccaaggtt cttttggata agaaagctaa ccccaatgcc aaagctctga atggcttcac
     2341 ccctctccat atcgcctgca aaaagaaccg aatccgagta atggaactcc ttttgaagca
     2401 cggtgcatct attcaagccg taaccgagtc gggccttacc ccaatccatg tcgctgcctt
     2461 catgggacat gtaaatatcg tgtcacagct aatgcatcat ggagcctccc caaacaccac
     2521 caacgtgaga ggagaaacag cattgcatat ggcggctcgg tcggggcaag cagaagtggt
     2581 gcggtatttg gtacaagatg gagctcaggt agaagcaaaa gctaaggatg accagacccc
     2641 actccacatt tcagcccgac tcgggaaggc tgacatagtg caacaactgt tacagcaagg
     2701 agcgtccccg aatgcagcaa caacttccgg gtacaccccc cttcaccttt cggccagaga
     2761 ggggcatgag gatgtagctg ccttccttct ggaccatgga gcatctttat ccataacaac
     2821 aaagaaggga ttcacgcctc tgcacgtggc tgcaaaatat gggaagcttg aagtggcaag
     2881 tctcctgctg cagaagagtg cgtctcctga tgccgctggg aagagcgggc taactccact
     2941 gcatgtagca gcacattacg ataatcagaa agtggccctt ctgcttttgg accagggagc
     3001 ctcaccccac gcagctgcaa agaacggtta tacgccactg cacatcgccg ccaagaagaa
     3061 ccagatggac atagccacgt ccctgctgga gtacggagct gatgcaaacg ccgttacccg
     3121 gcaagggatt gcgtccgtcc accttgcagc gcaggaaggg cacgtggaca tggtgtcgct
     3181 gctcctcagt agaaatgcga acgtcaactt gagcaataag agcggcctca ccccactcca
     3241 cctggcggct caagaagacc gagtgaacgt ggctgaggtc cttgtcaacc aaggggccca
     3301 cgtggatgca cagacaaaga tgggctacac gccgctccat gtgggctgtc actatggaaa
     3361 catcaaaata gtcaattttc tgctgcagca ttctgcgaaa gttaatgcca agacaaagaa
     3421 tggatacacg ccactgcacc aggcagccca gcagggccac acacacatca tcaacgtcct
     3481 gctccagaac aacgcttccc ccaatgaact cactgtgaat gggaacacag ccctggccat
     3541 cgcccgacgc cttggctaca tctcggtggt tgacacccta aaggtcgtga cagaggaaat
     3601 tatgaccacc actaccatca cggagaagca caaaatgaat gtcccagaaa cgatgaatga
     3661 agtcctcgac atgtcagacg atgaagttgg taaagccagc gcccccgaaa agctcagtga
     3721 tggggaatat atctcagatg gtgaagaagg tgataaaagc acatggttca aaattcccaa
     3781 agtgcaggag gttttggtga aaagtgaaga tgccatcaca ggggacactg acaagtatct
     3841 cgggccacag gacctcaagg agctgggcga tgactccctg cctgccgagg gctatgtggg
     3901 cttcagtctc ggagcccgtt ctgccagcct tcgctccttc agttcggata ggtcctacac
     3961 cctgaacaga agctcctatg cgcgggacag catgatgatc gaggagcttc tggtgccatc
     4021 caaagagcag caccttccat tcacgaggga gtttgactcc gactccctca gacactacag
     4081 ttgggcagca gacacactgg acaatgtgaa cctggtctcc agccctgtgc attctgggtt
     4141 tctggttagc tttatggtgg acgcgagagg gggctccatg cgaggaagcc gccaccacgg
     4201 gatgcggatc atcatccctc cgcgcaagtg tacggccccc acccgcatca cttgccgcct
     4261 ggtaaagaga cataaactgg ccaacccacc ccccatggtg gaaggagagg gattagccag
     4321 taggctggta gaaatgggtc ctgcgggggc acaattttta ggcccggtca tagtggaaat
     4381 ccctcatttt gggtccatga gaggaaagga gagggaactc attgtcctcc ggagcgagaa
     4441 cggagagacc tggaaggaac accagtttga cagcaaaaac gaagacctct cggagctcct
     4501 caatggcatg gacgaagaac ttgacagccc agaagagttg ggcacaaagc gcatctgcag
     4561 aatcatcacg aaggatttcc cccagtattt cgctgtggtt tcccggatta agcaggaaag
     4621 caaccagatt ggtcccgaag gtgggattct gagcagcacc acggtccccc tcgtccaggc
     4681 gtctttccca gagggtgcct taaccaaaag gatccgtgtg ggtctgcagg ctcagcccgt
     4741 accagaggag actgtgaaaa agatccttgg aaacaaagca acgtttagcc caattgtcac
     4801 ggtggagccg aggaggagga aattccataa gccgatcacc atgaccatcc cggtgccccc
     4861 accctcggga gaaggcgtgt ccaatgggta caagggggac accacgccca gcctgcgact
     4921 cctctgcagc attacaggag ggacctcgcc ggctcagtgg gaagacatca caggcacaac
     4981 cccgctgacc ttcataaagg actgtgtgtc tttcacaacc aatgtttcag ccaggttctg
     5041 gctggcggac tgccatcagg tgttagaaac cgtagggcta gcctcgcagc tgtacagaga
     5101 gttgatatgt gtcccctaca tggccaagtt tgttgttttt gccaaaacaa acgacccagt
     5161 ggaatcctcc ctaaggtgct tctgtatgac agacgacaga gtggacaaaa ccctggagca
     5221 gcaggagaat ttcgaggagg ttgccagaag caaagacatc gaggttctgg aaggaaagcc
     5281 catctatgtt gattgctatg gaaacctggc tcctctgacc aaaggagggc agcagcttgt
     5341 ttttaacttc tattctttca aagaaaacag actgccattt tccatcaagg ttagagacac
     5401 cagccaagag ccctgcggcc gtctgtcttt cctgaaggag ccgaaaacaa caaaaggatt
     5461 accccaaacg gctgtttgca acttaaatat tactctaccg gcgcataaaa aggctgagaa
     5521 ggcagacaga cgccagagct tcacatccct agccttacgt aagcgctaca gctacttgac
     5581 tgagcccagc atgagtccac agagtccttg tgagcggacg gatatcagga tggcaatagt
     5641 agccgatcac ctgggactta gttggacaga gctggcaagg gaactgaatt tttcagtgga
     5701 tgaaatcaac caaatacgag tggaaaatcc caattcttta atttctcaga gcttcatgtt
     5761 attaaaaaag tgggtgacga gagacgggaa gaatgccaca actgatgcct taacttcggt
     5821 cttaacaaaa attaaccgaa tagacatagt aactctgctg gaaggaccaa tatttgatta
     5881 tgggaatatt tcaggcacca gaagctttgc agatgaaaac aatgttttcc atgacccagt
     5941 tgatggttgg cagaacgaga cgccaagtgg aagcctagag tccccggcgc aagcgcgaag
     6001 aataaccggt gggttactgg accgtctgga cgacagctct gaccaggttc gggatcccat
     6061 tacctcatac ctcacaggag aagctgggaa gttcgaagca aacggaaacc acgcagaagt
     6121 cattccagaa gcaaaggcca aggcctactt tcctgaatcc caaaacgata tagggaaaca
     6181 gagcatcaag gagaacttga aaccaaaaac acacggatgt ggtcgcgctg aggaaccagt
     6241 gtcgcccctc acagcctacc agaaatctct agaagaaacc agcaagcttg tcatagaaga
     6301 cgcacctaaa ccctgtgtgc ctgtcggcat gaaaaagatg accaggactc cggctgacgg
     6361 caaagccagg ctcaacctcc aggaagagga ggggtccgcc aggtcagagc ctaagcaggg
     6421 agaaggctat aaggtgaaaa caaagaagga aatccggaat gtggagaaga aagcccacta
     6481 gtgacggtga cgtcagtcca ggaccacgcg ttcgtactgc cagtattgag aaactcacca
     6541 gagatcagca gggaggagaa tctctagcaa gagcggagtg tggatctgcc accccacaca
     6601 tcagtgacat gtttggggtt ttgggttttt ttggtttttt tttttaatgc agaaggataa
     6661 agaaaatcac cttttttttt atttagcatg agccaattta cagagcatgg agactcactt
     6721 tcattcccgg cgctgacacg cgtgcactaa gcaagtgcaa tgtaagatac aagaagccat
     6781 gttgttcaga ctcagcctca agtaatttgg tgtcactttc ggagaagaca gacaaacaac
     6841 gacacctgtg ccaccggaag gagggacagc acaagatgga gcgatcaaat ccagaagaca
     6901 cactgaaatt actaaatcca caacagctcg ccttattttt cttggaccca aactaactgt
     6961 cagggtataa acactgtttg tttctttttt ttttttttaa agaaaaaata ataataaaaa
     7021 aaatcaatag ttttgctgta aataataaca ctgtaaattc taacagaaga aactacaata
     7081 aagaattata aggcacctgc ctcacggaac acaaagatac cacaaacgcg tccaatgaca
     7141 ggcgtaccaa gtggcctcac cctggacaag gacgggaatc tggcgcgtgc gggacgctct
     7201 ctcactgact cctgtatatt agcaattatg atgtttgtac acgcaaaact gctcgcttgg
     7261 ttttaaaaag aaaatgcaaa tctttaaaaa aaaaaaaaaa gaaatctgct gcaaaattta
     7321 aataattccc ccagcgagga ggaattctgt agttctgtga agagaagaat ttttttcctt
     7381 cagaatatac taatattttg atgcatgcat atctccttat tttgattaaa ccttttccaa
     7441 ttttgcaaac actacagtct cctgcaacac gggagatttt acctgtaaac acaaagccct
     7501 tcatgtaata tttattgcta ttgccaattt tttcaatgaa atgaccaaaa atgggagaaa
     7561 aaaaaaaaac aactatacag tagtttgctt gggggtgggg ggaggggcgc tgttagtgct
     7621 tacagggggg aaaatgcttg ccactgtaga ggtggatggt gcttacaaga ggccccagtc
     7681 atgggtattt aaaaaaaatg gactgaccgg aaacccgtat ctagcaggat cgaagtgcac
     7741 tgtaaaaaaa aaaaaaaaaa aaagggaaaa agaaaaaaaa aaaagatgac tgtattgtgt
     7801 actggctctg agatgtagac ccccttcagc aagccaatca gtagtcacca tcctagcaat
     7861 gtccccgtta ggttagcggg gctgtcgcat tttatagagc atttctcttt tgggtttggt
     7921 gagattcctt cgttcactat cttaacttga aatcgacctc caacggacac ctcgctctaa
     7981 atgacatgta tgagaaaagc agacgctgga taacctagtt gattatttaa gcatataaaa
     8041 taaaccgtgt tcaactcttc cctta
//
