LOCUS       XM_039098847            8103 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin 3 (Ank3), transcript variant
            X13, mRNA.
ACCESSION   XM_039098847
VERSION     XM_039098847.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8103
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8103
                     /gene="Ank3"
                     /gene_synonym="ANK-3"
                     /note="ankyrin 3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 68 ESTs, 4
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 1 sample with
                     support for all annotated introns"
                     /db_xref="GeneID:361833"
                     /db_xref="RGD:620157"
     CDS             1138..6519
                     /gene="Ank3"
                     /gene_synonym="ANK-3"
                     /codon_start=1
                     /product="ankyrin-3 isoform X12"
                     /protein_id="XP_038954775.1"
                     /db_xref="GeneID:361833"
                     /db_xref="RGD:620157"
                     /translation="MAHAASQLKKNRDLEINAEEETEKKKKHRKRSRDRKKKSDANAS
                     YLRAARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDA
                     ATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLL
                     DNGASQSLATEDGFTPLAVALQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAA
                     ALLLQNDTNADIESKMVVNRATESGFTPLHIAAHYGNINVATLLLNRAAAVDFTARND
                     ITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAP
                     ILSKTKNGLSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAK
                     VLLDKKANPNAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVAAF
                     MGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQ
                     TPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVAAFLLDHGASL
                     SITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALL
                     LLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQE
                     GHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYT
                     PLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTPLHQAAQQGHTHIINVLLQNNASPN
                     ELTVNGNTALAIARRLGYISVVDTLKVVTEEIMTTTTITEKHKMNVPETMNEVLDMSD
                     DEVGKASAPEKLSDGEYISDGEEGDKSTWFKIPKVQEVLVKSEDAITGDTDKYLGPQD
                     LKELGDDSLPAEGYVGFSLGARSASPKISLRSFSSDRSYTLNRSSYARDSMMIEELLV
                     PSKEQHLPFTREFDSDSLRHYSWAADTLDNVNLVSSPVHSGFLVSFMVDARGGSMRGS
                     RHHGMRIIIPPRKCTAPTRITCRLVKRHKLANPPPMVEGEGLASRLVEMGPAGAQFLG
                     PVIVEIPHFGSMRGKERELIVLRSENGETWKEHQFDSKNEDLSELLNGMDEELDSPEE
                     LGTKRICRIITKDFPQYFAVVSRIKQESNQIGPEGGILSSTTVPLVQASFPEGALTKR
                     IRVGLQAQPVPEETVKKILGNKATFSPIVTVEPRRRKFHKPITMTIPVPPPSGEGVSN
                     GYKGDTTPSLRLLCSITGGTSPAQWEDITGTTPLTFIKDCVSFTTNVSARFWLADCHQ
                     VLETVGLASQLYRELICVPYMAKFVVFAKTNDPVESSLRCFCMTDDRVDKTLEQQENF
                     EEVARSKDIEVLEGKPIYVDCYGNLAPLTKGGQQLVFNFYSFKENRLPFSIKVRDTSQ
                     EPCGRLSFLKEPKTTKGLPQTAVCNLNITLPAHKKAEKADRRQSFTSLALRKRYSYLT
                     EPSMSPQSPCERTDIRMAIVADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSF
                     MLLKKWVTRDGKNATTDALTSVLTKINRIDIVTLLEGPIFDYGNISGTRSFADENNVF
                     HDPVDGWQNETPSGSLESPAQARRITGGLLDRLDDSSDQVRDPITSYLTGEAGKFEAN
                     GNHAEVIPEAKAKAYFPESQNDIGKQSIKENLKPKTHGCGRAEEPVSPLTAYQKSLEE
                     TSKLVIEDAPKPCVPVGMKKMTRTPADGKARLNLQEEEGSARSEPKQGEGYKVKTKKE
                     IRNVEKKAH"
ORIGIN      
        1 tgagtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtatttg attccctact
       61 taggagatct cttcccgtgc acattcagaa gacaccggcc tctccgaacc atgctgcttc
      121 acttctcaca atgaatattc agaggctgca gtcacggagg actcaggtcc tactaatact
      181 agcgtgatga caacgcgacc tagcccgaaa gccactctga tggaaacact gatgatggtc
      241 cccctgcccc tcacactgca gtagagtccc ggggaacctc tgaattgggc atctgtcctt
      301 cccaacagtg ggctcacgcc tttctggata gtgtgttgtc atgagcatgt tgttttaaaa
      361 agacaacaga cccttctgta gtcctctccg caaaatgtat caggactaac tgggcataat
      421 ggatgccctg ttgagaccag caatgcatgc attgtttgcc tgaaaattcg ctcagcgtct
      481 cgctggggga aagtggctga tttattttat atattttgcc accatcagca gttgaactca
      541 agctgctccg ttctctgaag ggttaatttt cgctccgtgc ggatctaggc tgatggataa
      601 attgcagcgc tctctctctc tctctctctc tctctctctc tctctctctc tctctctctg
      661 tctcttgtgg aggattctga agtcgtttct tcaggattag tgctggcttc tcagctgccg
      721 cctgtgtggt gactccgggt ccttcccttc tacaagagcc acccttcgca gcgttccccc
      781 ttcgaaggaa tcacttagac acttccagct ggtggcaggg gatgcggcca taacacagct
      841 cctccggtcc cagctacgtc cactacagcc tctgcatcag gatggctgcc ctctccgcga
      901 gaggggaagg ctcagcaagg tgtaggatga aacccggccc ctgctgtggt gggttttgaa
      961 agctgcggtt tcctcagcat ctctgcctct ctgcctcttg gacgcttcct tgcctttcag
     1021 ctcaggctcc tctcctgtga gggctatgct gctctatgcc tgactagagg tactcaagga
     1081 gatcaccttt tcagagaaag ctctgcgtgc ttgacagggt ctttttttcc atgcattatg
     1141 gctcatgccg cctcccagtt aaagaaaaac agggatttag aaatcaatgc ggaagaagag
     1201 accgagaaaa aaaagaagca ccgtaaacgg tcccgggatc gcaagaaaaa gtcggatgcc
     1261 aatgcaagtt acttgagagc agctcgggcg gggcacctgg aaaaggccct tgactacatc
     1321 aaaaatggag tggacgtcaa catctgtaac cagaatgggt tgaatgcgct ccatcttgct
     1381 tccaaagaag gccatgtgga agtggtctcc gagctgctgc agagagaagc caacgtcgat
     1441 gcagccacaa agaaaggaaa cacagcctta cacatcgcat ccttggctgg acaagcggaa
     1501 gtggtcaagg tcttggttac gaacggagcg aacgtcaacg cacagtctca gaatggcttc
     1561 acgccgctgt atatggcggc ccaggagaac cacctggaag tcgtcaggtt tcttctggac
     1621 aatggtgcca gccaaagcct ggctacagag gatggcttca cgccattggc cgtggctctt
     1681 caacaaggtc acgaccaagt cgtatccctc ctgctcgaga acgacacgaa gggaaaagtg
     1741 cgcctcccag ccctccacat cgcggcccgg aaagatgaca ccaaagcggc agctctgctc
     1801 ctacagaacg acaccaatgc agacatagag tcaaagatgg tggtgaatag agcaactgag
     1861 agtggcttca ccccactcca catagctgcc cactacggga atatcaatgt ggccacgttg
     1921 ctgttaaacc gagcggctgc cgtggacttc accgcacgga atgacatcac tcctttgcat
     1981 gttgcctcga aacggggaaa cgcaaatatg gtaaagctgt tgctcgaccg gggtgcgaag
     2041 atcgacgcca agaccaggga cggtctgacc ccgctgcact gcggggcgag aagtggccac
     2101 gagcaggtgg tagagatgtt gctggacaga gccgccccca tcctttcgaa aaccaagaat
     2161 ggactgtccc cactgcacat ggccacacaa ggagaccatt taaactgcgt ccaactcctc
     2221 ctccagcaca acgtgcccgt ggatgacgtc accaacgact acctgaccgc cctccacgtg
     2281 gcggcccact gcggccatta caaagttgcc aaggttcttt tggataagaa agctaacccc
     2341 aatgccaaag ctctgaatgg cttcacccct ctccatatcg cctgcaaaaa gaaccgaatc
     2401 cgagtaatgg aactcctttt gaagcacggt gcatctattc aagccgtaac cgagtcgggc
     2461 cttaccccaa tccatgtcgc tgccttcatg ggacatgtaa atatcgtgtc acagctaatg
     2521 catcatggag cctccccaaa caccaccaac gtgagaggag aaacagcatt gcatatggcg
     2581 gctcggtcgg ggcaagcaga agtggtgcgg tatttggtac aagatggagc tcaggtagaa
     2641 gcaaaagcta aggatgacca gaccccactc cacatttcag cccgactcgg gaaggctgac
     2701 atagtgcaac aactgttaca gcaaggagcg tccccgaatg cagcaacaac ttccgggtac
     2761 accccccttc acctttcggc cagagagggg catgaggatg tagctgcctt ccttctggac
     2821 catggagcat ctttatccat aacaacaaag aagggattca cgcctctgca cgtggctgca
     2881 aaatatggga agcttgaagt ggcaagtctc ctgctgcaga agagtgcgtc tcctgatgcc
     2941 gctgggaaga gcgggctaac tccactgcat gtagcagcac attacgataa tcagaaagtg
     3001 gcccttctgc ttttggacca gggagcctca ccccacgcag ctgcaaagaa cggttatacg
     3061 ccactgcaca tcgccgccaa gaagaaccag atggacatag ccacgtccct gctggagtac
     3121 ggagctgatg caaacgccgt tacccggcaa gggattgcgt ccgtccacct tgcagcgcag
     3181 gaagggcacg tggacatggt gtcgctgctc ctcagtagaa atgcgaacgt caacttgagc
     3241 aataagagcg gcctcacccc actccacctg gcggctcaag aagaccgagt gaacgtggct
     3301 gaggtccttg tcaaccaagg ggcccacgtg gatgcacaga caaagatggg ctacacgccg
     3361 ctccatgtgg gctgtcacta tggaaacatc aaaatagtca attttctgct gcagcattct
     3421 gcgaaagtta atgccaagac aaagaatgga tacacgccac tgcaccaggc agcccagcag
     3481 ggccacacac acatcatcaa cgtcctgctc cagaacaacg cttcccccaa tgaactcact
     3541 gtgaatggga acacagccct ggccatcgcc cgacgccttg gctacatctc ggtggttgac
     3601 accctaaagg tcgtgacaga ggaaattatg accaccacta ccatcacgga gaagcacaaa
     3661 atgaatgtcc cagaaacgat gaatgaagtc ctcgacatgt cagacgatga agttggtaaa
     3721 gccagcgccc ccgaaaagct cagtgatggg gaatatatct cagatggtga agaaggtgat
     3781 aaaagcacat ggttcaaaat tcccaaagtg caggaggttt tggtgaaaag tgaagatgcc
     3841 atcacagggg acactgacaa gtatctcggg ccacaggacc tcaaggagct gggcgatgac
     3901 tccctgcctg ccgagggcta tgtgggcttc agtctcggag cccgttctgc cagtcccaag
     3961 ataagccttc gctccttcag ttcggatagg tcctacaccc tgaacagaag ctcctatgcg
     4021 cgggacagca tgatgatcga ggagcttctg gtgccatcca aagagcagca ccttccattc
     4081 acgagggagt ttgactccga ctccctcaga cactacagtt gggcagcaga cacactggac
     4141 aatgtgaacc tggtctccag ccctgtgcat tctgggtttc tggttagctt tatggtggac
     4201 gcgagagggg gctccatgcg aggaagccgc caccacggga tgcggatcat catccctccg
     4261 cgcaagtgta cggcccccac ccgcatcact tgccgcctgg taaagagaca taaactggcc
     4321 aacccacccc ccatggtgga aggagaggga ttagccagta ggctggtaga aatgggtcct
     4381 gcgggggcac aatttttagg cccggtcata gtggaaatcc ctcattttgg gtccatgaga
     4441 ggaaaggaga gggaactcat tgtcctccgg agcgagaacg gagagacctg gaaggaacac
     4501 cagtttgaca gcaaaaacga agacctctcg gagctcctca atggcatgga cgaagaactt
     4561 gacagcccag aagagttggg cacaaagcgc atctgcagaa tcatcacgaa ggatttcccc
     4621 cagtatttcg ctgtggtttc ccggattaag caggaaagca accagattgg tcccgaaggt
     4681 gggattctga gcagcaccac ggtccccctc gtccaggcgt ctttcccaga gggtgcctta
     4741 accaaaagga tccgtgtggg tctgcaggct cagcccgtac cagaggagac tgtgaaaaag
     4801 atccttggaa acaaagcaac gtttagccca attgtcacgg tggagccgag gaggaggaaa
     4861 ttccataagc cgatcaccat gaccatcccg gtgcccccac cctcgggaga aggcgtgtcc
     4921 aatgggtaca agggggacac cacgcccagc ctgcgactcc tctgcagcat tacaggaggg
     4981 acctcgccgg ctcagtggga agacatcaca ggcacaaccc cgctgacctt cataaaggac
     5041 tgtgtgtctt tcacaaccaa tgtttcagcc aggttctggc tggcggactg ccatcaggtg
     5101 ttagaaaccg tagggctagc ctcgcagctg tacagagagt tgatatgtgt cccctacatg
     5161 gccaagtttg ttgtttttgc caaaacaaac gacccagtgg aatcctccct aaggtgcttc
     5221 tgtatgacag acgacagagt ggacaaaacc ctggagcagc aggagaattt cgaggaggtt
     5281 gccagaagca aagacatcga ggttctggaa ggaaagccca tctatgttga ttgctatgga
     5341 aacctggctc ctctgaccaa aggagggcag cagcttgttt ttaacttcta ttctttcaaa
     5401 gaaaacagac tgccattttc catcaaggtt agagacacca gccaagagcc ctgcggccgt
     5461 ctgtctttcc tgaaggagcc gaaaacaaca aaaggattac cccaaacggc tgtttgcaac
     5521 ttaaatatta ctctaccggc gcataaaaag gctgagaagg cagacagacg ccagagcttc
     5581 acatccctag ccttacgtaa gcgctacagc tacttgactg agcccagcat gagtccacag
     5641 agtccttgtg agcggacgga tatcaggatg gcaatagtag ccgatcacct gggacttagt
     5701 tggacagagc tggcaaggga actgaatttt tcagtggatg aaatcaacca aatacgagtg
     5761 gaaaatccca attctttaat ttctcagagc ttcatgttat taaaaaagtg ggtgacgaga
     5821 gacgggaaga atgccacaac tgatgcctta acttcggtct taacaaaaat taaccgaata
     5881 gacatagtaa ctctgctgga aggaccaata tttgattatg ggaatatttc aggcaccaga
     5941 agctttgcag atgaaaacaa tgttttccat gacccagttg atggttggca gaacgagacg
     6001 ccaagtggaa gcctagagtc cccggcgcaa gcgcgaagaa taaccggtgg gttactggac
     6061 cgtctggacg acagctctga ccaggttcgg gatcccatta cctcatacct cacaggagaa
     6121 gctgggaagt tcgaagcaaa cggaaaccac gcagaagtca ttccagaagc aaaggccaag
     6181 gcctactttc ctgaatccca aaacgatata gggaaacaga gcatcaagga gaacttgaaa
     6241 ccaaaaacac acggatgtgg tcgcgctgag gaaccagtgt cgcccctcac agcctaccag
     6301 aaatctctag aagaaaccag caagcttgtc atagaagacg cacctaaacc ctgtgtgcct
     6361 gtcggcatga aaaagatgac caggactccg gctgacggca aagccaggct caacctccag
     6421 gaagaggagg ggtccgccag gtcagagcct aagcagggag aaggctataa ggtgaaaaca
     6481 aagaaggaaa tccggaatgt ggagaagaaa gcccactagt gacggtgacg tcagtccagg
     6541 accacgcgtt cgtactgcca gtattgagaa actcaccaga gatcagcagg gaggagaatc
     6601 tctagcaaga gcggagtgtg gatctgccac cccacacatc agtgacatgt ttggggtttt
     6661 gggttttttt ggtttttttt tttaatgcag aaggataaag aaaatcacct ttttttttat
     6721 ttagcatgag ccaatttaca gagcatggag actcactttc attcccggcg ctgacacgcg
     6781 tgcactaagc aagtgcaatg taagatacaa gaagccatgt tgttcagact cagcctcaag
     6841 taatttggtg tcactttcgg agaagacaga caaacaacga cacctgtgcc accggaagga
     6901 gggacagcac aagatggagc gatcaaatcc agaagacaca ctgaaattac taaatccaca
     6961 acagctcgcc ttatttttct tggacccaaa ctaactgtca gggtataaac actgtttgtt
     7021 tctttttttt ttttttaaag aaaaaataat aataaaaaaa atcaatagtt ttgctgtaaa
     7081 taataacact gtaaattcta acagaagaaa ctacaataaa gaattataag gcacctgcct
     7141 cacggaacac aaagatacca caaacgcgtc caatgacagg cgtaccaagt ggcctcaccc
     7201 tggacaagga cgggaatctg gcgcgtgcgg gacgctctct cactgactcc tgtatattag
     7261 caattatgat gtttgtacac gcaaaactgc tcgcttggtt ttaaaaagaa aatgcaaatc
     7321 tttaaaaaaa aaaaaaaaga aatctgctgc aaaatttaaa taattccccc agcgaggagg
     7381 aattctgtag ttctgtgaag agaagaattt ttttccttca gaatatacta atattttgat
     7441 gcatgcatat ctccttattt tgattaaacc ttttccaatt ttgcaaacac tacagtctcc
     7501 tgcaacacgg gagattttac ctgtaaacac aaagcccttc atgtaatatt tattgctatt
     7561 gccaattttt tcaatgaaat gaccaaaaat gggagaaaaa aaaaaaacaa ctatacagta
     7621 gtttgcttgg gggtgggggg aggggcgctg ttagtgctta caggggggaa aatgcttgcc
     7681 actgtagagg tggatggtgc ttacaagagg ccccagtcat gggtatttaa aaaaaatgga
     7741 ctgaccggaa acccgtatct agcaggatcg aagtgcactg taaaaaaaaa aaaaaaaaaa
     7801 agggaaaaag aaaaaaaaaa aagatgactg tattgtgtac tggctctgag atgtagaccc
     7861 ccttcagcaa gccaatcagt agtcaccatc ctagcaatgt ccccgttagg ttagcggggc
     7921 tgtcgcattt tatagagcat ttctcttttg ggtttggtga gattccttcg ttcactatct
     7981 taacttgaaa tcgacctcca acggacacct cgctctaaat gacatgtatg agaaaagcag
     8041 acgctggata acctagttga ttatttaagc atataaaata aaccgtgttc aactcttccc
     8101 tta
//
