LOCUS       XM_039098846            6294 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin 3 (Ank3), transcript variant
            X12, mRNA.
ACCESSION   XM_039098846
VERSION     XM_039098846.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6294
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6294
                     /gene="Ank3"
                     /gene_synonym="ANK-3"
                     /note="ankyrin 3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 44 ESTs, 3
                     Proteins, and 99% coverage of the annotated genomic
                     feature by RNAseq alignments, including 6 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:361833"
                     /db_xref="RGD:620157"
     CDS             292..5712
                     /gene="Ank3"
                     /gene_synonym="ANK-3"
                     /codon_start=1
                     /product="ankyrin-3 isoform X11"
                     /protein_id="XP_038954774.1"
                     /db_xref="GeneID:361833"
                     /db_xref="RGD:620157"
                     /translation="MSEEAKEKTAKPAHRKRKGKKSDANASYLRAARAGHLEKALDYI
                     KNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQ
                     AEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPL
                     AVALQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQNDTNADIESKSG
                     FTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAK
                     IDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSPLHMATQGDHLNCVQ
                     LLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNGFTPLHIACK
                     KNRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGE
                     TALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASP
                     NAATTSGYTPLHLSAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASL
                     LLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKK
                     NQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNANVNLSNKSGLT
                     PLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVN
                     AKTKNGYTPLHQAAQQGHTHIINVLLQNNASPNELTVNGNTALAIARRLGYISVVDTL
                     KVVTEEIMTTTTITEKHKMNVPETMNEVLDMSDDEGEDAITGDTDKYLGPQDLKELGD
                     DSLPAEGYVGFSLGARSASPKISSDRSYTLNRSSYARDSMMIEELLVPSKEQHLPFTR
                     EFDSDSLRHYSWAADTLDNVNLVSSPVHSGFLVSFMVDARGGSMRGSRHHGMRIIIPP
                     RKCTAPTRITCRLVKRHKLANPPPMVEGEGLASRLVEMGPAGAQFLGPVIVEIPHFGS
                     MRGKERELIVLRSENGETWKEHQFDSKNEDLSELLNGMDEELDSPEELGTKRICRIIT
                     KDFPQYFAVVSRIKQESNQIGPEGGILSSTTVPLVQASFPEGALTKRIRVGLQAQPVP
                     EETVKKILGNKATFSPIVTVEPRRRKFHKPITMTIPVPPPSGEGVSNGYKGDTTPSLR
                     LLCSITGGTSPAQWEDITGTTPLTFIKDCVSFTTNVSARFWLADCHQVLETVGLASQL
                     YRELICVPYMAKFVVFAKTNDPVESSLRCFCMTDDRVDKTLEQQENFEEVARSKDIEV
                     LEGKPIYVDCYGNLAPLTKGGQQLVFNFYSFKENRLPFSIKVRDTSQEPCGRLSFLKE
                     PKTTKGLPQTAVCNLNITLPAHKKAEKADRRQSFTSLALRPQSPCERTDIRMAIVADH
                     LGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALTSVL
                     TKINRIDIVTLLEGPIFDYGNISGTRSFADENNVFHDPVDGWQNETPSGSLESPAQAR
                     RITGGLLDRLDDSSDQVRDPITSYLTGEAGKFEANGNHAEVIPEAKAKAYFPESQNDI
                     GKQSIKENLKPKTHGCGRAEEPVSPLTAYQKSLEETSKLVIEDAPKPCVPVGMKKMTR
                     TPADGKARLNLQEEEGSARSEPKQVKSPGEAFTRMTACCYKDLRHSESDSSSEEERRV
                     TTRVIRRRVIIKGEEAKTIPGESVTEEQFTDEEGNLITRKITRKVIRRIGPQERKQDD
                     VQGEGYKVKTKKEIRNVEKKAH"
ORIGIN      
        1 aagaagaaga aaaagaaagc aaggaaggaa gaaaacaaag ggttgaaata ttgatttttc
       61 tttggaggaa taaccagggc tttgctggag agaacaccca gtttctcccc gaggcaagct
      121 gagttgtccg tgacagcagc cagggctggc ttgaagcagc cgctctgcct ggggagctcc
      181 ctaaatggac tttggtctca atgctgtgac tctttgtcgg gggtttggat gtgggaacac
      241 cacggaaggt gatctcctgt ctcgtctcaa ctcccctgat ctcaaggaaa gatgagcgaa
      301 gaggcaaagg agaaaaccgc caagcctgct cataggaaga ggaaagggaa aaagtcggat
      361 gccaatgcaa gttacttgag agcagctcgg gcggggcacc tggaaaaggc ccttgactac
      421 atcaaaaatg gagtggacgt caacatctgt aaccagaatg ggttgaatgc gctccatctt
      481 gcttccaaag aaggccatgt ggaagtggtc tccgagctgc tgcagagaga agccaacgtc
      541 gatgcagcca caaagaaagg aaacacagcc ttacacatcg catccttggc tggacaagcg
      601 gaagtggtca aggtcttggt tacgaacgga gcgaacgtca acgcacagtc tcagaatggc
      661 ttcacgccgc tgtatatggc ggcccaggag aaccacctgg aagtcgtcag gtttcttctg
      721 gacaatggtg ccagccaaag cctggctaca gaggatggct tcacgccatt ggccgtggct
      781 cttcaacaag gtcacgacca agtcgtatcc ctcctgctcg agaacgacac gaagggaaaa
      841 gtgcgcctcc cagccctcca catcgcggcc cggaaagatg acaccaaagc ggcagctctg
      901 ctcctacaga acgacaccaa tgcagacata gagtcaaaga gtggcttcac cccactccac
      961 atagctgccc actacgggaa tatcaatgtg gccacgttgc tgttaaaccg agcggctgcc
     1021 gtggacttca ccgcacggaa tgacatcact cctttgcatg ttgcctcgaa acggggaaac
     1081 gcaaatatgg taaagctgtt gctcgaccgg ggtgcgaaga tcgacgccaa gaccagggac
     1141 ggtctgaccc cgctgcactg cggggcgaga agtggccacg agcaggtggt agagatgttg
     1201 ctggacagag ccgcccccat cctttcgaaa accaagaatg gactgtcccc actgcacatg
     1261 gccacacaag gagaccattt aaactgcgtc caactcctcc tccagcacaa cgtgcccgtg
     1321 gatgacgtca ccaacgacta cctgaccgcc ctccacgtgg cggcccactg cggccattac
     1381 aaagttgcca aggttctttt ggataagaaa gctaacccca atgccaaagc tctgaatggc
     1441 ttcacccctc tccatatcgc ctgcaaaaag aaccgaatcc gagtaatgga actccttttg
     1501 aagcacggtg catctattca agccgtaacc gagtcgggcc ttaccccaat ccatgtcgct
     1561 gccttcatgg gacatgtaaa tatcgtgtca cagctaatgc atcatggagc ctccccaaac
     1621 accaccaacg tgagaggaga aacagcattg catatggcgg ctcggtcggg gcaagcagaa
     1681 gtggtgcggt atttggtaca agatggagct caggtagaag caaaagctaa ggatgaccag
     1741 accccactcc acatttcagc ccgactcggg aaggctgaca tagtgcaaca actgttacag
     1801 caaggagcgt ccccgaatgc agcaacaact tccgggtaca ccccccttca cctttcggcc
     1861 agagaggggc atgaggatgt agctgccttc cttctggacc atggagcatc tttatccata
     1921 acaacaaaga agggattcac gcctctgcac gtggctgcaa aatatgggaa gcttgaagtg
     1981 gcaagtctcc tgctgcagaa gagtgcgtct cctgatgccg ctgggaagag cgggctaact
     2041 ccactgcatg tagcagcaca ttacgataat cagaaagtgg cccttctgct tttggaccag
     2101 ggagcctcac cccacgcagc tgcaaagaac ggttatacgc cactgcacat cgccgccaag
     2161 aagaaccaga tggacatagc cacgtccctg ctggagtacg gagctgatgc aaacgccgtt
     2221 acccggcaag ggattgcgtc cgtccacctt gcagcgcagg aagggcacgt ggacatggtg
     2281 tcgctgctcc tcagtagaaa tgcgaacgtc aacttgagca ataagagcgg cctcacccca
     2341 ctccacctgg cggctcaaga agaccgagtg aacgtggctg aggtccttgt caaccaaggg
     2401 gcccacgtgg atgcacagac aaagatgggc tacacgccgc tccatgtggg ctgtcactat
     2461 ggaaacatca aaatagtcaa ttttctgctg cagcattctg cgaaagttaa tgccaagaca
     2521 aagaatggat acacgccact gcaccaggca gcccagcagg gccacacaca catcatcaac
     2581 gtcctgctcc agaacaacgc ttcccccaat gaactcactg tgaatgggaa cacagccctg
     2641 gccatcgccc gacgccttgg ctacatctcg gtggttgaca ccctaaaggt cgtgacagag
     2701 gaaattatga ccaccactac catcacggag aagcacaaaa tgaatgtccc agaaacgatg
     2761 aatgaagtcc tcgacatgtc agacgatgaa ggtgaagatg ccatcacagg ggacactgac
     2821 aagtatctcg ggccacagga cctcaaggag ctgggcgatg actccctgcc tgccgagggc
     2881 tatgtgggct tcagtctcgg agcccgttct gccagtccca agataagttc ggataggtcc
     2941 tacaccctga acagaagctc ctatgcgcgg gacagcatga tgatcgagga gcttctggtg
     3001 ccatccaaag agcagcacct tccattcacg agggagtttg actccgactc cctcagacac
     3061 tacagttggg cagcagacac actggacaat gtgaacctgg tctccagccc tgtgcattct
     3121 gggtttctgg ttagctttat ggtggacgcg agagggggct ccatgcgagg aagccgccac
     3181 cacgggatgc ggatcatcat ccctccgcgc aagtgtacgg cccccacccg catcacttgc
     3241 cgcctggtaa agagacataa actggccaac ccacccccca tggtggaagg agagggatta
     3301 gccagtaggc tggtagaaat gggtcctgcg ggggcacaat ttttaggccc ggtcatagtg
     3361 gaaatccctc attttgggtc catgagagga aaggagaggg aactcattgt cctccggagc
     3421 gagaacggag agacctggaa ggaacaccag tttgacagca aaaacgaaga cctctcggag
     3481 ctcctcaatg gcatggacga agaacttgac agcccagaag agttgggcac aaagcgcatc
     3541 tgcagaatca tcacgaagga tttcccccag tatttcgctg tggtttcccg gattaagcag
     3601 gaaagcaacc agattggtcc cgaaggtggg attctgagca gcaccacggt ccccctcgtc
     3661 caggcgtctt tcccagaggg tgccttaacc aaaaggatcc gtgtgggtct gcaggctcag
     3721 cccgtaccag aggagactgt gaaaaagatc cttggaaaca aagcaacgtt tagcccaatt
     3781 gtcacggtgg agccgaggag gaggaaattc cataagccga tcaccatgac catcccggtg
     3841 cccccaccct cgggagaagg cgtgtccaat gggtacaagg gggacaccac gcccagcctg
     3901 cgactcctct gcagcattac aggagggacc tcgccggctc agtgggaaga catcacaggc
     3961 acaaccccgc tgaccttcat aaaggactgt gtgtctttca caaccaatgt ttcagccagg
     4021 ttctggctgg cggactgcca tcaggtgtta gaaaccgtag ggctagcctc gcagctgtac
     4081 agagagttga tatgtgtccc ctacatggcc aagtttgttg tttttgccaa aacaaacgac
     4141 ccagtggaat cctccctaag gtgcttctgt atgacagacg acagagtgga caaaaccctg
     4201 gagcagcagg agaatttcga ggaggttgcc agaagcaaag acatcgaggt tctggaagga
     4261 aagcccatct atgttgattg ctatggaaac ctggctcctc tgaccaaagg agggcagcag
     4321 cttgttttta acttctattc tttcaaagaa aacagactgc cattttccat caaggttaga
     4381 gacaccagcc aagagccctg cggccgtctg tctttcctga aggagccgaa aacaacaaaa
     4441 ggattacccc aaacggctgt ttgcaactta aatattactc taccggcgca taaaaaggct
     4501 gagaaggcag acagacgcca gagcttcaca tccctagcct tacgtccaca gagtccttgt
     4561 gagcggacgg atatcaggat ggcaatagta gccgatcacc tgggacttag ttggacagag
     4621 ctggcaaggg aactgaattt ttcagtggat gaaatcaacc aaatacgagt ggaaaatccc
     4681 aattctttaa tttctcagag cttcatgtta ttaaaaaagt gggtgacgag agacgggaag
     4741 aatgccacaa ctgatgcctt aacttcggtc ttaacaaaaa ttaaccgaat agacatagta
     4801 actctgctgg aaggaccaat atttgattat gggaatattt caggcaccag aagctttgca
     4861 gatgaaaaca atgttttcca tgacccagtt gatggttggc agaacgagac gccaagtgga
     4921 agcctagagt ccccggcgca agcgcgaaga ataaccggtg ggttactgga ccgtctggac
     4981 gacagctctg accaggttcg ggatcccatt acctcatacc tcacaggaga agctgggaag
     5041 ttcgaagcaa acggaaacca cgcagaagtc attccagaag caaaggccaa ggcctacttt
     5101 cctgaatccc aaaacgatat agggaaacag agcatcaagg agaacttgaa accaaaaaca
     5161 cacggatgtg gtcgcgctga ggaaccagtg tcgcccctca cagcctacca gaaatctcta
     5221 gaagaaacca gcaagcttgt catagaagac gcacctaaac cctgtgtgcc tgtcggcatg
     5281 aaaaagatga ccaggactcc ggctgacggc aaagccaggc tcaacctcca ggaagaggag
     5341 gggtccgcca ggtcagagcc taagcaggtc aaaagcccgg gcgaagcgtt cactcggatg
     5401 accgcctgct gttacaagga cttgagacac agtgagagtg attcaagctc agaggaggag
     5461 cggagggtca ctacccgggt catacgacgg cgtgtgatta taaagggaga ggaagccaaa
     5521 accatccctg gtgaatctgt cacagaagag caatttaccg atgaagaagg caacctcatc
     5581 actagaaaaa tcactcggaa ggtaataaga cggattggtc cacaagagag gaagcaggat
     5641 gatgtgcagg gagaaggcta taaggtgaaa acaaagaagg aaatccggaa tgtggagaag
     5701 aaagcccact agtgacggtg acgtcagtcc aggaccacgc gttcgtactg ccagtattga
     5761 gaaactcacc agagatcagc agggaggaga atctctagca agagcggagt gtggatctgc
     5821 caccccacac atcagtgaca tgtttggggt tttgggtttt tttggttttt ttttttaatg
     5881 cagaaggata aagaaaatca cctttttttt tatttagcat gagccaattt acagagcatg
     5941 gagactcact ttcattcccg gcgctgacac gcgtgcacta agcaagtgca atgtaagata
     6001 caagaagcca tgttgttcag actcagcctc aagtaatttg gtgtcacttt cggagaagac
     6061 agacaaacaa cgacacctgt gccaccggaa ggagggacag cacaagatgg agcgatcaaa
     6121 tccagaagac acactgaaat tactaaatcc acaacagctc gccttatttt tcttggaccc
     6181 aaactaactg tcagggtata aacactgttt gtttcttttt ttttttttta aagaaaaaat
     6241 aataataaaa aaaatcaata gttttgctgt aaataataac actgtaaatt ctaa
//
