LOCUS       XM_039104040            8699 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin 2 (Ank2), transcript variant
            X44, mRNA.
ACCESSION   XM_039104040
VERSION     XM_039104040.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039104040.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8699
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8699
                     /gene="Ank2"
                     /note="ankyrin 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 29 ESTs, 3 long
                     SRA reads, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 15 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:362036"
                     /db_xref="RGD:620156"
     CDS             542..6562
                     /gene="Ank2"
                     /codon_start=1
                     /product="ankyrin-2 isoform X44"
                     /protein_id="XP_038959968.1"
                     /db_xref="GeneID:362036"
                     /db_xref="RGD:620156"
                     /translation="MMNEDAAQKSDSGEKFNGSSQRRKRPKKSDSNASFLRAARAGNL
                     DKVVEYLKGGIDINTCNQNGLNALHLAAKEGHVGLVQELLGRGSSVDSATKKGNTALH
                     IASLAGQAEVVKVLVKEGANINAQSQNGFTPLYMAAQENHIDVVKYLLENGANQSTAT
                     EDGFTPLAVALQQGHNQAVAILLENDTKGKVRLPALHIAARKDDTKSAALLLQNDHNA
                     DVQSKMMVNRTTESGFTPLHIAAHYGNVNVATLLLNRGAAVDFTARNGITPLHVASKR
                     GNTNMVKLLLDRGGQIDAKTRDGLTPLHCAARSGHDQVVELLLERGAPLLARTKNGLS
                     PLHMAAQGDHVECVKHLLQHKAPVDDVTLDYLTALHVAAHCGHYRVTKLLLDKRANPN
                     ARALNGFTPLHIACKKNRIKVMELLVKYGASIQAITESGLTPIHVAAFMGHLNIVLLL
                     LQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLG
                     KTEIVQLLLQHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTP
                     LHVAAKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAAHYDNQKVALLLLEKGASPHA
                     TAKNGYTPLHIAAKKNQMQIASTLLNYGAETNTVTKQGVTPLHLASQEGHTDMVTLLL
                     EKGANIHMSTKSGLTSLHLAAQEDKVNVADILTKHGADQDAYTKLGYTPLIVACHYGN
                     VKMVNFLLKQGANVNAKTKNGYTPLHQAAQQGHTHIINVLLQHGAKPNATTANGNTAL
                     AIAKRLGYISVVDTLKVVTEEVTTTTTTITEKHKLNVPETMTEVLDVSDEEGDDTVTG
                     DGGEYLRPEDLKELGDDSLPSSQFLDGMNYLRYSLEGGRSDSLRSFSSDRSHTLSHAS
                     YLRDSAMIDDTVVIPSHQVSALAKEAERNSYRLSWGTENLDNVALSSSPIHSGFLVSF
                     MVDARGGAMRGCRHNGLRIIIPPRKCTAPTRVTCRLVKRHRLATMPPMVEGEGLASRL
                     IEVGPSGAQFLGPVIVEIPHFAALRGKERELVVLRSENGDSWKEHFCEYTEDELNEIL
                     NGMDEVLDSPEDLEKKRICRIITRDFPQYFAVVSRIKQDSNLIGPEGGVLSSTVVSQV
                     QAVFPEGALTKRIRVGLQAQPMHSELVKKILGNKATFSPIVTLEPRRRKFHKPITMTI
                     PVPKASSDVMLNGFGGDAPTLRLLCSITGGTTPAQWEDITGTTPLTFVNECVSFTTNV
                     SARFWLIDCRQIQESVAFASQVYREIICVPYMAKFVVFAKSHDPIEARLRCFCMTDDK
                     VDKTLEQQENFSEVARSRDVEVLEGKPIYVDCFGNLVPLTKSGQHHIFSFFAFKENRL
                     PLFVKVRDTTQEPCGRLSFMKEPKSTRGLVHQAICNLNITLPIYAKESESDQEQEEEI
                     CMTSEKNPQDEQERMEERLAYIADHLGFSWTELARELDFTEEQIHQIRIENPNSLQDQ
                     SHALLKYWLERDGKHATDTVLIECLTKINRMDIVHLLETNTEPLQERMGRTYAEMEQT
                     ITLDHSEGFSVLPEELCAVKEKKEQEASKESESSDHPPMVSEEDISVGYSTFQDCIPK
                     TEGDSPAAALSPQMHQESVQQDFSGKMQDQQEYYVTTPGAEVEDTQKATVIPDSLCKT
                     PEDISTPPEEAKPCLQTPVAIEHASPIVQEPEEASEPKEESSPRKTSLVIVESTDDQP
                     QVFEKLDGDAAFQKELTEELGELEASSDEEAMVTTRVVRRRVIIQGDDMPDIPPETVT
                     EEEYVDENGHTVVKKVTRKIIRRYVSSDGTEKEEITMQGMPQEPVNIEDGDSYSKVIK
                     RVVLKSDTQLSEVTLSEPSIVSGTSQFQAEPVEGRRVSKVVKTTMVHGERMEKSLGDS
                     SLATDLPSAKEDFEEALGYTGSHMKVHLPSLVENEILKEDGSIIKRTTMSKARTQRRA
                     VVKDQQGKCINLEHLEDVPGALDQDDLQRDLQQLLRHFCKENTKQEAK"
ORIGIN      
        1 tgaatcaggt taatagcatg gtaaaaatat aactttctta taattaatta ctctaggatc
       61 ttaatagcct ccgttttcct catccggacc ctctacgatg caccctttcg ggttcagaca
      121 gtcaaatgtc atcatttcct tggtgcgcat tgtatccgtt ccaccgaagt acctagagga
      181 agaaaatgaa gcgtaggtct tatgcgtgac aggcatagat gcagtaatgg gtgtgtcaaa
      241 agccaagcag cagggctccc caaattgcgc ctgtcccagg cattcttttt ttccgcggtg
      301 ttcttcattg tagcctattc ctggatggta attggttgaa tctgatttaa caatgcagtc
      361 agataaacag ttgtggcagc tgctgccatg gcaacgtcac catcctctcc ctcccagcgc
      421 gcgccccttc cccacccctc cttctgctcc cgcctgcctc ctgcaagtgc acgctcgtta
      481 gtggtctgct cctgcggccg gggtttgatg gcacagctat tttcttcccc aactgttcaa
      541 aatgatgaac gaagatgcag ctcagaaaag cgacagtgga gagaagttta acggcagtag
      601 tcaaagaaga aaaagaccca agaagtctga cagcaatgcc agcttcctcc gcgctgccag
      661 agcaggcaac ctggacaaag ttgtggagta tctgaaagga ggcattgaca tcaacacttg
      721 caatcagaat ggactcaacg cgctccatct ggcagccaag gaaggccacg tgggcctcgt
      781 gcaggagctg ctgggaagag ggtcctccgt ggattctgcc accaagaagg gaaacaccgc
      841 tcttcacatt gcatcactgg ccggacaagc ggaagttgtc aaagttctag ttaaggaggg
      901 agccaacatc aacgcccagt cgcagaatgg cttcactcct ttgtatatgg ctgcccagga
      961 gaatcacatt gatgttgtaa aatatttgct agaaaatgga gctaaccaga gtactgctac
     1021 agaggacggt tttactcctc tagccgtggc actccagcag ggacacaacc aggcggtggc
     1081 cattctcttg gagaatgaca ccaaaggaaa ggtgaggctg ccggctttgc acattgcggc
     1141 tcgaaaagac gataccaagt ccgccgccct cctgcttcag aacgatcaca atgctgatgt
     1201 gcaatccaag atgatggtga acagaacaac cgagagtggc ttcacccctt tgcacatagc
     1261 tgcacactac gggaatgtaa acgtggcgac tcttcttcta aaccggggag ctgctgtaga
     1321 cttcaccgcc aggaatggaa tcactcccct gcatgtggct tccaaacggg gaaataccaa
     1381 catggtgaag ctcctactgg atcgaggtgg tcagatcgat gccaaaacta gggacgggct
     1441 gacaccactt cactgtgctg cacgaagtgg gcatgaccaa gtggtggaac tgctgttgga
     1501 acggggtgct cccttgctgg cgaggactaa gaatgggctg tctccccttc acatggctgc
     1561 gcagggggac cacgtggaat gtgtgaagca cctgctacag cacaaggcac ctgttgatga
     1621 cgtcaccctg gactacctga cggctcttca tgttgctgca cactgtgggc actaccgtgt
     1681 aaccaaactc ctgctggaca agagagccaa cccgaacgca agagccctga atggttttac
     1741 tccactgcac attgcctgca agaaaaaccg catcaaagtc atggaactgc tggtgaaata
     1801 tggggcttca atccaagcta taacagagtc tggcctcaca ccaatacatg tggctgcctt
     1861 catgggccac ttgaacattg tcctccttct gctgcagaac ggagcctctc cagatgtcac
     1921 taacattcgt ggtgagacgg cgcttcacat ggcggcccgg gctgggcagg tggaagtggt
     1981 tcgatgtctc ctgaggaacg gcgctcttgt ggatgccaga gccagggagg agcagacgcc
     2041 tttacatatt gcctccagac tgggtaagac agaaatcgtc cagctgctgt tacaacacat
     2101 ggctcatcca gacgcagcca ccacaaatgg gtacacacca ctacacattt ctgctcggga
     2161 aggacaggta gatgtggcct ctgtcctgct ggaagctgga gctgcacact cattagctac
     2221 caagaagggc ttcactccct tgcacgtagc agccaagtat ggaagcctgg atgtggcaaa
     2281 acttctcttg caacgccgcg cagccgcaga ttcagcaggg aagaatggcc ttaccccgct
     2341 ccatgttgct gctcattatg acaaccagaa ggtggcgctg ttgctgctgg agaagggtgc
     2401 ttcccctcat gccactgcca agaatggcta tactccttta cacattgctg ccaagaagaa
     2461 ccagatgcag atagcttcca cactgctgaa ctatggagct gagacgaaca ctgtgacgaa
     2521 gcaaggggtc actccactgc atctggcctc acaagagggg cacacagaca tggtcacctt
     2581 gcttctggag aaaggagcca acatccacat gtcaactaag agtggactca cctctttaca
     2641 cctcgcagcc caagaagata aagtgaacgt tgccgacatt ctcaccaaac acggggctga
     2701 tcaggatgcc tacacaaagc ttggttacac acctttaatc gttgcctgtc actacgggaa
     2761 tgtgaaaatg gtcaacttcc ttctaaaaca gggagcaaac gtcaatgcaa aaaccaagaa
     2821 tggctataca cctttgcacc aagctgccca gcagggacac acacacatca ttaatgtgct
     2881 gctccagcat ggggccaaac ctaatgctac cactgcgaat ggtaacacag ccctggcgat
     2941 tgctaagcgg ctgggctaca tctccgtggt tgacaccctg aaggttgtga ctgaagaggt
     3001 caccaccact accacgacta tcacggaaaa acataagcta aatgttcctg agacaatgac
     3061 ggaagttctg gatgtttctg atgaagaggg tgatgacaca gtgacaggtg atgggggaga
     3121 atatctcagg ccagaagatc tcaaggagct tggtgatgac tcgctaccca gcagtcagtt
     3181 cctggatggc atgaactacc ttcggtacag tctggagggc ggaagatctg acagcctccg
     3241 gtccttcagt tccgacaggt ctcacactct gagccacgca tcgtacctga gggacagtgc
     3301 catgatcgac gacacggttg tgatccccag ccaccaggtg tcagccctag ccaaggaggc
     3361 agaaaggaat tcttatcgtc tgagctgggg caccgagaac ttagacaacg tggctctttc
     3421 ttccagtcct attcattcag gtttcctagt cagttttatg gtggatgccc gtggtggtgc
     3481 catgcgaggg tgcagacaca atgggctcag aatcattatc ccacctcgga aatgcacagc
     3541 cccgactcga gtcacctgcc gccttgtgaa acgccacaga ctggcgacga tgccacccat
     3601 ggtggaagga gaaggcctgg ccagccgcct gattgaagtc ggaccttccg gagctcagtt
     3661 ccttgggccc gtgattgtgg agatccctca cttcgccgct cttcgaggaa aggagaggga
     3721 gctggtggtc ctgcgcagtg aaaatggaga cagctggaaa gagcatttct gtgaatacac
     3781 tgaagatgag ctgaacgaaa tccttaatgg catggatgaa gtgctggaca gtccggaaga
     3841 cctggaaaag aaacgcatct gccgcatcat cacccgtgac ttcccacagt actttgcagt
     3901 agtgtctcgc atcaaacagg acagcaatct gattggcccc gagggtggag tgctgagcag
     3961 cacagtggta tcacaggtgc aagctgtctt cccagagggc gcgctcacca agcgcatccg
     4021 tgtaggctta caggctcagc ctatgcacag tgagctggtg aagaagatcc taggcaacaa
     4081 agcaaccttc agcccaatag tcactttgga acccaggaga aggaaattcc acaagccaat
     4141 cactatgact attcctgtcc ccaaggcttc aagcgacgtc atgctaaatg gttttggggg
     4201 agatgctcca accttaagat tactgtgcag cataacaggt ggaactacgc ctgcccagtg
     4261 ggaagacatc acaggaacta cacccctaac gtttgtcaat gagtgtgttt cctttacaac
     4321 caacgtgtct gccaggttct ggctgataga ctgtcgacag attcaggagt ctgtggcctt
     4381 tgcatcacaa gtgtatagag aaattatctg tgtaccatat atggccaaat ttgtagtgtt
     4441 tgccaagtca catgacccca ttgaagccag gttgcggtgt ttctgtatga cagatgacaa
     4501 agtagataag acccttgaac aacaagaaaa cttctctgag gtggccagga gcagagatgt
     4561 ggaggtttta gaaggaaaac ctatttatgt tgactgcttt ggcaacctgg taccactaac
     4621 caagagtggt caacatcata tattcagttt ttttgccttc aaagaaaaca gacttcctct
     4681 ctttgtcaag gtacgtgaca caacccagga accttgcggg cgactctcat ttatgaagga
     4741 acccaaatcc acaagaggac tggtgcatca agctatttgc aacttaaaca tcaccctgcc
     4801 aatttatgcc aaggaatcgg agtccgatca agagcaggag gaagagatct gtatgacatc
     4861 agaaaaaaat ccccaggatg agcaggagcg gatggaagag aggctggctt acattgcaga
     4921 tcaccttggc ttcagctgga cagaattagc aagggaactg gatttcactg aggagcaaat
     4981 tcaccaaatt cgaattgaga accccaactc ccttcaagat cagagtcatg cactgctcaa
     5041 gtactggctg gagagagatg ggaagcatgc cacagatact gtcctcatcg aatgcctcac
     5101 caagatcaac aggatggaca ttgtacatct cctggagacc aacacggagc ccctccagga
     5161 gcgcatgggc cgcacttatg cagaaatgga gcaaaccatt actctggacc acagtgaagg
     5221 gttttcggta cttccagagg agctctgtgc tgtcaaggag aagaaggagc aggaggcttc
     5281 caaagaaagc gagtctagtg accacccacc catggtctct gaagaagaca tatctgttgg
     5341 ttattccaca tttcaggatt gcatccccaa aactgagggg gacagcccag cagcagcact
     5401 gtctccccaa atgcaccagg agtcagttca acaagatttc tcagggaaaa tgcaagacca
     5461 gcaggaatac tatgtgacca caccaggggc agaagtagaa gacactcaga aggccacagt
     5521 cattcctgac tctctttgta agactcctga ggacatcagc acccctcctg aggaagcaaa
     5581 gccttgtctc cagactccag tggctatcga acatgcttct ccaattgtcc aagaacctga
     5641 ggaggcttct gagcccaaag aggaaagttc tccaaggaaa accagcctgg tcatagtgga
     5701 gtcaacagac gaccagcctc aggtctttga aaaattggat ggtgacgctg cttttcaaaa
     5761 ggagctaaca gaggaattag gggagctgga ggccagctct gatgaggagg ccatggtaac
     5821 taccagggtg gtccgacgga gagtgatcat tcagggagac gatatgcctg acattccccc
     5881 agagacagtc acagaggaag aatacgtcga cgagaacggg cacactgtgg tgaagaaggt
     5941 tacccggaaa attatcaggc ggtacgtatc ctctgatggc acagagaagg aggagattac
     6001 catgcaggga atgccacagg agccagtcaa cattgaggat ggggacagct attccaaagt
     6061 gataaagcgt gtggtattga agagtgacac ccagctgtca gaggtgactt tgtccgaacc
     6121 cagcattgtg tctggtacct cacagtttca ggcggaacca gtagaaggcc gtagagtcag
     6181 caaagttgtt aaaacaacaa tggttcatgg agaacggatg gagaagagcc tgggggattc
     6241 tagcttagcc actgaccttc cttcagccaa agaggacttt gaagaggctt tgggttacac
     6301 aggtagccac atgaaagtcc acttgcccag tttagtagag aatgaaatcc tgaaggagga
     6361 tggatcaata attaagagga caacaatgag taaagccagg acacagagga gggctgtggt
     6421 gaaggaccag caggggaaat gcatcaactt ggagcacctg gaggatgttc ccggagcact
     6481 ggaccaagac gacctccagc gagatctcca gcaactcctt cggcatttct gcaaagagaa
     6541 cacaaagcaa gaggccaaat gaggagctgc ccaggtctca ccagaaacca caaacccact
     6601 caatatgcaa cttcccgttt ccacacagga gtgactgaag tggcctaatt actgggatcc
     6661 ctggacattt ccactctgtg caaacacaca gcatctactt ttcctccttt ctccctgccc
     6721 ctctctaact ataagctaat ttgtgaccaa agatagcatc cttcattccg gatgctgtat
     6781 ccgctatttt gagcatccgt gctaacctgg gaactggcac ctccattgta tgcttctgct
     6841 caagctccat gaaaatccat taatcagaag aacttcacct gcagacttct tcaagtgaca
     6901 ggggaatcct tccaaggata tctatgtata atgtatatag ctgaaattct cagacgaaca
     6961 acagagtaaa attcaaacca ctgcctgtca taattacact gggcaccatg gaataaaagc
     7021 ctctagatat tgctgaatga tggttaatta tgagattgct aacacaatcg gacggtaatc
     7081 cagttctacg gaaggaacac ttcagaccta gacacgtcct taggacttcc agagtagcca
     7141 ttgctccaaa agccgttggg atcataatct tgaagaagga tcccaaggag cggtctctag
     7201 tactggttgg ccatagccgt tggctctcgg actgcgaccc tgagggaggg ggagaagggc
     7261 tcacaggcaa gcagatggaa acggtgaggt attctggtgc tagaagcctc aggggtggtg
     7321 ttctagcacc ttcatgtgtc tttgactttg gacatgttgg cagggtattt taaaagctat
     7381 aactactgta gttttccagt gttcattgct gctttagcaa accatgctgt cttactggtg
     7441 gtactttctt ctggccactg cactgtagat aattcattgg aaacaagatt tatgcaccac
     7501 acaaaaggtt aaatgctgtc accatgttgg agtggtttct tttctctttt ttttcccccc
     7561 acctccaggt ttatctttcc tctaataacc tgcatgtagc attaaacaca cacacacaca
     7621 cacacacaca cacacacaca cacacacaca cacacacagc ccttcttatc acactaatgg
     7681 ttttcactct gagttttcac cttctagcca cgtctgccct tcagcttgca gacgagattg
     7741 agaaatcctt ggaaaatttg gttctgattt tctttttctt tttggtttat ttatttgaaa
     7801 cccagacacc cttggaaact gaagtgcgtt tgtgtgactt tctgtttgtt tccgagaagg
     7861 gccaatgaca gtctgagtga tccccatgcc ctgtgtctaa tccctctagt gattgaagct
     7921 gtgtagcatt ttaacatata tatataaata tattcacaaa tatattcata taaacagtat
     7981 acgttttgaa ccagttattt gttaaagaaa gtttattcaa tgaagatgaa attaaaaaag
     8041 aaagaaagaa aacagtctac cccagagatt gaaaattttc cagtcctagc tggttttttc
     8101 ctgtgtgcag aactgactca ttgcttggaa tgtcagacac aaacatgaca aataacagca
     8161 cttcatcttt ttaagtaaca ttgccaagag aagaattttc ctgggagagt gctttcccat
     8221 cagccaaatc tcctgagcag tcctcagcac tagcactttc tgggggttga gtagaaacaa
     8281 agtattcttt ggcatccaaa ctgagagaga gagagagaga gagagaggcg ggtggcagcc
     8341 ctttgtgaga tacatggtgg ccatcttgtc agaccttcac ccggagctca tgaaaagctt
     8401 ttctgttgtg ttatttgcag tgcagatgat gtctgtgtga caacataatg gttcttcact
     8461 ttttttcctt caattttgat tttttttttt gctgtgttat caaaaacttg aatactgtga
     8521 gaagaagtga attttcagtt gatgaatcag catcttgttc ccatggtgat aacactaact
     8581 gaatatatct atgagggcat gtattagtta ttggaaaacc atacaacact aacagtacat
     8641 agctgcaatg ttgtacaatg gctgatttaa ctaaataaaa tgtataagtg ttaagtgtg
//
