LOCUS       XM_008764815            3935 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus angel homolog 1 (Angel1), transcript
            variant X5, mRNA.
ACCESSION   XM_008764815
VERSION     XM_008764815.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008764815.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008764815.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3935
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3935
                     /gene="Angel1"
                     /gene_synonym="RGD1306238"
                     /note="angel homolog 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 11 ESTs, 1 long
                     SRA read, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 64 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:362765"
                     /db_xref="RGD:1306238"
     CDS             347..2212
                     /gene="Angel1"
                     /gene_synonym="RGD1306238"
                     /codon_start=1
                     /product="protein angel homolog 1 isoform X3"
                     /protein_id="XP_008763037.1"
                     /db_xref="GeneID:362765"
                     /db_xref="RGD:1306238"
                     /translation="MAPRGPDQEECEGLLQQWREEGWNQTLSTASEGPLADKGLAESS
                     LALLMDNSGEQDTASEDKWSSRQLSDLRAADNLDQPFPEVLGEEPLAEDEGPLWAAVP
                     VQTGPQYADCAVLPMGAMAAEQWEEDPAMVAWSIAPEPMPQEETSMWPFEGLEQLQPP
                     PMEIPYHEILWREWEDFSTQPDAQGLEAGDGPQFQFTLMSYNILAQDLMQQSSELYLH
                     CHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRT
                     GCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDNVGLVLLLQPLVPEGLGQVSV
                     APLCVANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSDGSHCPIILCGDLNSVPDSP
                     LYNFIRDGELQYNGMPAWKVSGQEDFSHQLYQRKLQAPLWPSSLGITDCCQYVTSCHP
                     KRSERLKYGRDFLLRFRFCDLACQRPVGLVLMEGVTDTKPDRPAGWAECIFEEEISEL
                     EPVFPRTIGTIQHCLHLTSVYTHFLPQHGRPEVTTMPLGLGMTVDYIFFSAESCENEN
                     RSDHRLDRDGTLKLLGRLSLLSEEILWAANGLPNPFYSSDHLCLLASFGMEVTAP"
ORIGIN      
        1 cgtcaggccg catgaccgca gtcctctgcc aagtgtgagg tggtccgcgg gccgtcctgg
       61 ccccacgagg cttgggctga ccggcgactc tcgtgggcag cccctcctca cgctgtggtc
      121 tggtgacgtc gggccacggt taacgtggac ccagggctgg ggaagggggc gtcttccttg
      181 gctgtggcgg tggtcctggg gcaggctgag acactcccgg ggatcgggag cggtggcaac
      241 ccgggacagg cgaggaccgg acttctcggc ggatgctttc tttacatgtc gaaaaaatgc
      301 ccttctggcg aagagctcgt ccccccaggt agagggtaac tttgccatgg cccctcgggg
      361 gcctgaccaa gaggagtgtg agggcctgct tcagcagtgg cgagaagaag ggtggaacca
      421 gacactctca actgcaagtg agggtcctct tgcagataag ggactggctg agagcagcct
      481 ggccctcctg atggataact ctggagaaca ggacactgcc tcggaggaca agtggtccag
      541 caggcagctg agtgaccttc gggcagcgga caacctggac cagcctttcc ctgaggtgct
      601 aggggaggaa cctctggccg aggatgaggg tcctttgtgg gcagctgttc ccgtacagac
      661 agggccccag tatgcagact gtgctgttct cccaatgggt gcaatggctg cagaacaatg
      721 ggaagaggac cctgcaatgg tggcctggag catagcaccg gagcctatgc cccaggaaga
      781 gacttccatg tggccctttg aaggcctgga acagctgcag cctcccccaa tggaaatacc
      841 ttatcatgaa atcctgtggc gagaatggga ggatttctcc acgcagccag atgctcaggg
      901 tctggaggca ggagatggcc ctcagttcca gttcactctg atgtcgtata atatcctggc
      961 ccaggatctg atgcagcaga gctcagagct ctatctgcat tgccatccag acatcctcaa
     1021 ctggaattac cgctttgcca acctcatgca ggaattccag cactgggacc cggatatcct
     1081 gtgccttcag gaagtccagg aagaccatta ctgggagcag ctggagccct ctctgcggat
     1141 gatgggcttc acctgttttt acaagaggag gactgggtgt aaaacggatg gctgcgctgt
     1201 gtgctacaag cccaccaggt tccgtctgct gtgtgccagc cctgtggagt acttccggcc
     1261 tgggttggag ctcctcaatc gggacaatgt gggcttagtg ttgctgctgc agccgctggt
     1321 gccagaaggt ctggggcaag tctcagtggc tcccctgtgt gtggcaaata cccatgtcct
     1381 gtacaaccca cgtcggggtg atgtcaagct ggcccagatg gccattcttc tggccgaggt
     1441 ggacaaggtg gccaggttgt cagatggcag ccactgccct atcatcttgt gtggggacct
     1501 gaattctgtc cctgattcac ctctctacaa cttcatcagg gatggagagc tccagtacaa
     1561 tgggatgcca gcctggaagg tttctggaca ggaagacttc tctcatcagc tttaccagag
     1621 gaagctgcag gccccattgt ggcccagctc cctgggcatc actgattgct gtcaatatgt
     1681 cacctcctgt catcccaaga gatcagagag actaaaatat ggccgagact tcctactacg
     1741 attccgcttc tgcgacctcg cttgtcagcg accagtagga ctggttctca tggaaggagt
     1801 gacagacact aagccagatc gacctgctgg ttgggccgag tgtatctttg aggaagagat
     1861 atctgaactt gagcctgtct tccccaggac tataggcacc atccagcact gcctccacct
     1921 gacctcagta tatacccatt tcctgcccca gcacggccgc ccggaggtca cgacgatgcc
     1981 cttaggtctt gggatgacag tggattacat ttttttctca gctgagtcct gtgagaatga
     2041 gaacagaagt gatcacaggt tggatcgaga tggaaccctc aagctcctgg gccgcctctc
     2101 cctcctctct gaagagattc tctgggcggc caatggcttg cccaacccgt tctactcttc
     2161 agaccatctc tgcttgcttg ccagcttcgg catggaagtc actgccccat gagggccccc
     2221 agggaaagag ctcactggac cgacgactgc aaatgccccg tgctgtggaa acttatgccc
     2281 cttcccttgt tccctcctgc ccgtggttag actttctcca ggcctgtcca cgttctcggc
     2341 ctgtggtccc tgccctgccc caacctcttc ctaatcctgt gccacatgct aggtggcccc
     2401 gggagaggta gagagcatcc cctttcttct gtgtacccag cgcccccttc ccccccattg
     2461 atttttaatg accagggttg cgggagttat tgatctcatt ggttattcgc tttaggccat
     2521 ttcttggtgg caccctctga cccaaccttc cccttccttt catgacctct gggctctggc
     2581 atgcacatgc aaggtgtgtg taaagcatga gttctcttgg ggtgggactg cccagcacag
     2641 ccaagcctgc ttctgcctag tccatgtgcc accatgaggt actggactag gggcaggtgg
     2701 agagcatgat gtagtagctg tgtgctgcca ggaggcagca agcaggggcc cttttctccc
     2761 agtcagtcat ctaggcatcc tgggcacact tgttatttct ggagacaaac tggcccacag
     2821 cctggagcgg tagcccaggg ataccccaca cctctgatct cctcactgac ttccttgagg
     2881 aaggcggttg atgccttgtg ctggggctcg ctgggctggc acagtgctgg gaggctttaa
     2941 ggatgaggag actccacctt cagggaactg ttgtctcacc agactgagga actgggtaag
     3001 aggcggagcc cggtagaaag agcaggaggc tctacagcct tagccagcac tggagcccca
     3061 gagggcttga cctctgacct ctgtgcacct aagaaagttt ctttgcttct tctccccacc
     3121 cacccccacc ccctcttgtt cccttccatt ttctctccgg agaagcgtgc tgtttagctc
     3181 aggccaaaac atctcaacag aagcctggct ttgggcacac taggtctaag aactcagggt
     3241 ggcagtgctt actcatttgc tctgcctttc ctccccaaaa gtgggctccc taacctacag
     3301 aaaacccctg tagcccaaac catgtcacct gcatgcctta ttcagtgctg gggtacagcc
     3361 tagggtgtcc ttgggccaga tcctccacac agctttaact caaaatatct gctggcccta
     3421 gttgggaggg aattgactga ggctggagtt aggcttggtg gaccaggagc cccattcttc
     3481 ccttgatttg gaagccaaaa acccagctgg aacgctgctg ctgcactgct gactctcagc
     3541 ttcccatgct caggtctggg gacttcttgt cctgtgtgtg tctattttaa gttttgttct
     3601 ctgggtactg ggcatctgcc tgtctgagcc ccaggcccat ctgcccacaa cccacttttc
     3661 tctgtcactc tctgggcacc tcctgagatg gccccacagc tgagccctgc tggttctcag
     3721 aacagggcca atgattgttc cctctgccag gaaatgcagg gtcaactgct aaagaaggtg
     3781 gaggcccaga gcttgatggt ttatcttttc cttgtttctc ctttgtttct gttttagaaa
     3841 tgaagtgtgg gggtttaaat ggcatttaag ctgtaccctg gagccggcag aaccaggcaa
     3901 cgtttttttc aaataaaggc ttatcatgcc cccta
//
