LOCUS       XM_006234973            8926 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus anaphase promoting complex subunit 1
            (Anapc1), transcript variant X2, mRNA.
ACCESSION   XM_006234973
VERSION     XM_006234973.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006234973.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006234973.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8926
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8926
                     /gene="Anapc1"
                     /note="anaphase promoting complex subunit 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 62 ESTs, 2 long SRA reads, 5 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 18 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:311412"
                     /db_xref="RGD:1306629"
     CDS             216..6050
                     /gene="Anapc1"
                     /codon_start=1
                     /product="anaphase-promoting complex subunit 1 isoform X1"
                     /protein_id="XP_006235035.1"
                     /db_xref="GeneID:311412"
                     /db_xref="RGD:1306629"
                     /translation="MSNFSEERATMIAAGDLQEFVPFGRDHCKHHPNALNLQLRQLQP
                     ASELWSSDGAAGLVGSLQEVTIHEKQKESWQLRKGVSEIGDAADYDEELYVAGNMVIW
                     SKGSKSQALAVYKAFTVDSTVQQALWCDFIISQDKSEKIYKSHELEKCICILQSSCMN
                     MHSIDGKDYIASLPFQVANVWATKYGLLFERSSSSHEVPPSLPREPLPTMFSMLHPLD
                     EITPLVCKSGSLFGSSRVQYVVDPAVKIVFLNIDPSIVMTYDAVQNVHSVWTLRRVKP
                     EEETAVLKFPEQAGTLQNAATSSSLTAHLRSLSKGESPVASPFQNYSSIHSQSRSASS
                     PSLHSRSPSISNMAALSRAHSPALGVHSFSGVQRFNLSSHNQSPKRHSISHSPSGSFN
                     DSFLAPETEPIVPELCIDHLWTETLPNMREKNSQASKVFITTDLCGQKFLCFLVEAQL
                     QLRCVKFQESNDKTQLIFGSVTNIHAKDAAPVEKIDTMLVLEGNGNLVLYTGVVRVGK
                     VFIPGLPAPSLTMSNMMPRPSTPLDGVSTPKPLSKLLGSMDEVVLLSPVPELRDSSKL
                     NDSLYNEDCTFQQLGTYIHSVRDPVHNRVTLELSNGSMVRITIPEVATSELVQTCLQA
                     IKFILPKEVAVQVLVKWYNVHSAPGGPSCHSEWSLFVICLLNMMGYNTDRLAWTRSFD
                     FEGSLSPVIAPKKARPSDTGSDDDWEYLLNSEYHHNVESHLLNKSLCLNALEVTKTKD
                     EDFPQNLSLDSSTLLFAHIPAIFFVLHLVYEELKLNTLMGEGICSLIDLLVQLARDLK
                     LEPYLDHYYRDYPTLVKTTGQVCTIDQGQMGFMHHPSFFTSEPPSIYQWVSSCLKGEG
                     TPPYPYLPGICERSRLVVLSIALYTLGDESCVSDETSQYLSKVTLTPQKPQAEQEENR
                     FTFRQSASVSVLAERLVVWMASVGFTLRDLETLPFGIALPIRDAIYHCREQPDSDWSE
                     AVCLLIGRQDLSKQACEGNLPRGKSVLSSDVASGAEAEEEDDGMNDLNHEVMSLIWSE
                     DLRVQDVRRLLQSAQPVRVNVVQYPELSDHEFIEEKENRLLQLCQRTMALPVGRGMFT
                     LFSYHPVPTEPLPIPKLNLTGRAPPRNTTVDLNSGNIDVPPNMASWASFHNGVAAGLK
                     IAPASQIDSAWIVYNKPKHAELANEYAGFLMALGLNGHLTKLATLNIHDYLTKGHEMT
                     SIGLLLGVSAAKLGTMDMSITRLLSIHVPALLPPTSTELDVPHNVQVAAVVGIGLVYQ
                     GTAHRHTAEVLLAEIGRPPGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLIGMSDLN
                     VPEQLYQYMVGGHRRFQTGMHREKHKSPSYQIKEGDTINVDVTCPGATLALAMIYLKT
                     NNRSIADWLRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRE
                     NSISLSEIELPCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKD
                     FMNYLSAPNASVTGPYNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGEMNY
                     GFHLAHHMALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLY
                     VLAAEPRLLVPVDVDTNTPCYALIEVTYKGTQWYEQTKEELMAPTLLPELHLLKQMKV
                     KGPRYWELLIDLSKGEQHLRSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANR
                     NSEARAFKPETISSFTSDPALLSFAEYFCKPTVSMGQKQEILDLFSSILYECVAQETP
                     EMLPAYIAMDQALRSLKKRDMSNTSDLWQIKLILEFFSSRSHQERQQTYPKRGLFINS
                     EFLPVVKCTVDSTLDQWLQAGGDVCVHAYLSGQPVEKSQLNMLACFLVYHSVPAPRHL
                     PPLGLEGSTSFAELLFRFRHLKMPVRALLRLAPVLLGNPQPMVM"
ORIGIN      
        1 ccgctgtttg catatgtatc tagtaaccag taataacagt tttacttcta gcatgtcaac
       61 tccgtgcttt gatgtggcct gtaacgaata acaagtttaa caacttttgg agacctgtga
      121 aagtattaag tatgatgcct ttgggctaaa agacgtcgaa ctgtgaaaat gatgctgtaa
      181 aaagcaatcc taaataatgt tgatatttgg aacccatgtc gaacttctct gaagaaaggg
      241 caacgatgat tgcagccggg gatctgcagg aattcgttcc ttttggtcga gaccactgca
      301 agcaccaccc taatgctctg aaccttcagc ttcgtcagct gcagccagct tctgagttat
      361 ggtcttccga tggtgcagct ggcttggtgg gatctcttca ggaggttacg atccatgaga
      421 aacagaagga aagctggcag ttaagaaaag gcgtgagcga gattggagat gcagccgact
      481 atgatgaaga gctctatgtg gctgggaaca tggttatctg gagcaaaggg agtaaaagcc
      541 aggccttggc agtgtacaaa gccttcacag tggacagcac tgttcagcag gcattgtggt
      601 gtgacttcat tatatcacag gataagtccg aaaagatcta taagagccat gaactagaga
      661 aatgcatatg tatattacag agctcgtgta tgaacatgca cagcatagac gggaaggatt
      721 acatagcttc cttaccattt caggtggcaa acgtgtgggc cactaagtat ggcttgctgt
      781 ttgaacgaag cagttcttca catgaggtgc ctccaagtct acctagagag cctttgccta
      841 ccatgttcag catgctgcac cctctggatg agataactcc acttgtttgt aaatccggaa
      901 gtctttttgg ctcatcgcgg gtgcagtatg ttgtagatcc agcagtgaaa attgtgtttc
      961 tgaacattga cccctccatt gtaatgacct atgatgctgt tcagaatgtg cattctgtgt
     1021 ggactctcag gagggtaaag ccagaggaag agactgctgt tttaaagttc cctgagcagg
     1081 cagggaccct gcagaatgca gccactagca gctccctgac agcacatctc agaagcctct
     1141 ccaaaggcga gtcccctgtt gcttcgccgt tccagaatta ctcttccatt cacagccaga
     1201 gccgctcagc ctcctcaccc agcctacact cccggtcgcc ttccatttcc aacatggcgg
     1261 ctctaagtcg tgctcactct cctgccttag gtgtgcactc tttctcaggg gtgcaaagat
     1321 tcaacctttc aagccacaat cagtcaccaa agagacacag tatttcccac tctccgagtg
     1381 gcagtttcaa cgattcattt ttggcaccag aaacagagcc aattgttcct gagctttgca
     1441 ttgaccactt gtggactgag acacttccga atatgagaga gaaaaattct caggcctcca
     1501 aggtatttat aacgactgac ctgtgtggac agaagttcct gtgcttttta gtggaggccc
     1561 agcttcagtt acgctgtgta aagtttcaag agagtaatga caagactcag cttatctttg
     1621 gctctgtcac caacatacat gcaaaagacg cagccccagt ggagaagata gacaccatgt
     1681 tggtactcga aggcaatggg aatctggtgc tgtacacagg agtggttcgg gtggggaaag
     1741 tgtttattcc tggacttcca gctccttccc tgacaatgtc caacatgatg cctcggccca
     1801 gtaccccact cgatggtgtt agcactccga agcctcttag caaattactt ggatcaatgg
     1861 atgaggtggt tcttctgtct ccagttccag aattgaggga ttcttcaaaa cttaacgatt
     1921 ctctctacaa tgaggattgt acattccagc agcttggaac ttacattcat tcagtgcgag
     1981 accctgttca taacagagtc actctagaac tgagcaacgg ctccatggtt aggatcacta
     2041 tccctgaagt ggccacctcg gaattagtgc aaacgtgtct gcaagcaatt aagttcatcc
     2101 tgccgaaaga agtagcagtt caggtgctcg tcaagtggta caatgtgcac agtgctccgg
     2161 gaggacccag ttgtcactca gagtggagtt tatttgtgat ttgtctcttg aacatgatgg
     2221 gttataacac agaccgctta gcatggacgc gaagtttcga ctttgaagga tcactttccc
     2281 cagtcattgc acccaaaaaa gcgaggccct ctgatactgg gtctgacgat gactgggagt
     2341 acttactgaa ttcagagtac catcataatg ttgagtctca tcttttgaac aaatctctat
     2401 gtttgaatgc tttggaagtt acaaagacaa aagatgaaga ttttccacaa aacctcagtc
     2461 tggattcttc tactcttctc tttgctcaca ttcctgcaat tttttttgtt cttcacctgg
     2521 tttatgaaga gcttaagtta aatactctaa tgggagaagg aatttgttct ctaattgacc
     2581 tccttgttca gttggcaagg gacttaaaat tggagcctta cttggaccat tactacagag
     2641 attacccaac tcttgtcaaa actactggac aagtgtgtac cattgaccaa ggtcagatgg
     2701 gatttatgca tcatccctca ttttttactt ccgagccacc aagtatttat cagtgggtga
     2761 gttcgtgcct gaagggcgaa ggaacgccac cctatcccta cctccctggg atctgcgaga
     2821 ggagcaggct ggtggtcttg agtattgccc tctacaccct tggtgatgag agttgtgttt
     2881 ctgatgaaac ctcccagtat ttatccaaag taaccttaac tccccaaaag ccacaagcag
     2941 aacaagaaga aaacaggttt actttccggc agtctgcttc tgtgtctgtt ctggctgaga
     3001 gactggttgt ctggatggcc agtgtaggat tcactttaag agatctggag actcttccct
     3061 ttgggattgc tcttcccatc agagatgcaa tctaccactg tcgggagcag cctgattcag
     3121 attggtcaga agccgtctgt ctcctgattg gacgtcagga cctttccaag caggcttgcg
     3181 aaggaaattt acccagaggc aaatctgtgc tctcatcaga tgtggcttca ggagctgagg
     3241 ctgaggagga agacgatggc atgaatgact tgaaccatga ggttatgtca ttaatatgga
     3301 gtgaagattt acgggtgcag gatgtgcgaa ggctacttca aagtgcacag cctgtccgtg
     3361 tcaatgtggt acagtaccca gaactcagtg accatgagtt cattgaggaa aaagaaaaca
     3421 ggctgctcca gttgtgtcag cgaactatgg cccttccagt aggacgaggg atgtttacct
     3481 tgttctcata ccatcctgtt ccaacagagc cgttgcccat tcctaaattg aatctgacag
     3541 ggcgagcccc tccgagaaac acaactgtag atcttaatag tgggaacatc gatgtgcctc
     3601 ccaatatggc aagttgggcc agctttcata atggtgtggc tgctggcctg aagatagccc
     3661 ctgcctccca gatagactca gcttggattg tttacaacaa gccaaagcat gctgagttag
     3721 ccaatgagta cgcaggcttt ctcatggccc taggtctgaa tgggcacctt accaagctgg
     3781 ctactctcaa tatccatgac tacttgacca agggccatga aatgacaagc attggattgc
     3841 tacttggtgt ttctgctgca aaacttggca ccatggacat gtcaattacc cggcttctta
     3901 gcattcacgt tcctgctctc ttacccccga catccacaga gcttgatgtg cctcacaatg
     3961 tccaagtggc ggctgtggtt ggcattggcc ttgtttatca aggcacagct cacagacata
     4021 ctgcagaagt cctgttggct gaaatagggc ggccccctgg tccagaaatg gaatattgca
     4081 ctgacagaga atcctactcc ttagctgctg gcctggccct gggcatggtt tgcttggggc
     4141 atggcagcaa tttgattggc atgtctgacc tcaatgtgcc tgagcagctg tatcagtaca
     4201 tggtcggagg tcacaggcgt tttcaaactg gaatgcacag ggagaaacat aagtctccaa
     4261 gttaccagat caaagaagga gataccataa acgtggacgt gacttgtcca ggcgctactc
     4321 tggctctggc tatgatctac ttgaaaacca ataacagatc tattgctgat tggctgcgag
     4381 ctcctgatac catgtatttg ctcgactttg tgaaaccaga gttcctcttg cttaggacac
     4441 ttgctcggtg cctgatcctg tgggatgaca ttttaccgaa ttccaagtgg gttgacagca
     4501 atgttcctca gattataaga gaaaatagta tctctctgag tgagattgaa ttgccttgtt
     4561 cagaggactt gaatttggaa accttgtcgc aagcacacgt ctacatcatc gcaggagcct
     4621 gcttgtctct gggttttcga tttgctggct cagagaactt atcagcattt aactgtctgc
     4681 ataaatttgc aaaagatttt atgaattatt tatctgcacc caatgcttct gtaacagggc
     4741 cctacaacct cgaaacctgc ctgagtgttg tcctgctgtc tcttgccatg gtgatggctg
     4801 gctctgggaa cctgaaggtg ttgcagctct gccgcttcct gcatatgaag acgggcggag
     4861 agatgaacta tggcttccac ttggcccacc acatggccct gggccttctc tttttgggag
     4921 gaggaaggta ctctttgagc acatccaact catccattgc tgcccttctc tgtgcccttt
     4981 acccacattt cccagcccac agcactgaca accggtatca tctccaggcc cttcggcacc
     5041 tctacgtgct ggctgcagaa ccaaggctcc tggtgcctgt ggatgtggat acaaacacac
     5101 cctgctatgc ccttatagaa gttacttaca agggcactca gtggtatgaa cagaccaaag
     5161 aagaactgat ggctccaacc ctgcttccag aactccatct tctaaagcag atgaaggtta
     5221 aagggccaag atactgggaa ctgctcatag atttaagcaa gggagagcag cacttgaggt
     5281 ccattctttc caaggatgga gttttatatg taaagctcag ggcaggccag ctctcctaca
     5341 aagaagaccc aatggggtgg cagagtctgt tggcacagac tgtggctaac aggaactcag
     5401 aggcccgggc tttcaagcca gaaacaattt catcattcac ttctgatcca gcacttctgt
     5461 catttgctga atatttctgc aagccgactg tgagcatggg ccaaaaacag gagattctgg
     5521 acctcttttc ttccatactt tatgagtgtg ttgctcagga aactccagag atgttgcctg
     5581 cctacatagc aatggatcag gctttaagaa gtcttaaaaa gagagacatg tcgaacacat
     5641 ctgatctttg gcagataaag ttgatattag agtttttcag ttcacgaagc caccaggaaa
     5701 ggcagcagac ctatcctaag cgagggctct tcataaactc ggagttccta cctgtggtga
     5761 agtgcactgt tgattccacc ctggaccagt ggctacaagc tggaggcgat gtgtgtgtgc
     5821 atgcctacct tagtgggcag cctgttgaga agtctcagct aaacatgctg gcctgcttcc
     5881 tggtctacca ctctgtgcca gcaccgcgac acttgccacc cctgggactg gaagggagca
     5941 caagctttgc tgaactcctc ttcaggttca gacacctaaa aatgccagtc cgcgctttgc
     6001 tgagactggc tcctgtgctg ctcgggaatc cacagccgat ggttatgtga ccgaccacct
     6061 ccggcggtaa acctaccccc aaaaaccact gcggcgcaga atcctgatgg cagcaaagtt
     6121 acggcagcat ttctgttttg tgaccaacgg agctcagatg catacgcctc actgtgttta
     6181 aaacccatgt tgaaaatatt acagataacg ctggtgctgt ccatatgtca tatgatgtat
     6241 aaaaagtcag ttaaaactca cttttataaa taaagatttt tggtttgttt tcgaagctat
     6301 tgatgattgc tttggacttc agagaataaa tggacaggct gagttttgaa gcctttgaac
     6361 tttagtggtt ctgtactcag aaaaagccac atcgcgagag tggactttct gctaccccag
     6421 gagagtttct gtgttgtctg ttacgtgctt cccatggtgg atgatgtctt tactgcgagc
     6481 agatttctac ttaatgaaga cttgctcagc atggagtact ggaccatgcc caagccctgc
     6541 ctttgtacag ctatgtaggc tgcagctctt tggagataac caaggttaaa ggataattaa
     6601 gggtgagtcc ctgttttgta gacttgatgg cctgttcaga agaggaagag atgtcttctc
     6661 tctgcacctt gtgagaactc atagcacagc tgctcacaag ccaagaagat tcctttgtga
     6721 ggaaccagtc agaaggtctt ggacttctgc acctacgagt ataagaaata aattcctgat
     6781 gcttaagcca tcctatcttg tctgtggtac ttggttttgc agcctgtgca gactagtgca
     6841 cgacacctgc tcaaaatacc taaatacaaa gttaccccac agaggagtgt taaaatattt
     6901 ttaaaggcag aagtcagtct atctggaaag tgcttttgta caggttagct catgatggcc
     6961 atgtgacagg aagagtgttc ctactgtgct cacagcttct cagacaagtg ggactgtgaa
     7021 caaggaggaa cagcaaactg cacactcact ggtttcctgc ttgtttctga aaaagccaat
     7081 agaaattgct ccgctgggat ttggtaatgt ccgtctgctc gtctgcctgc agcaaggtaa
     7141 tttgtggctg acttttaggg caaaatgtgt tttccttccc tcttagatta aggattgcac
     7201 ttaagtggca aggggtgatg aacgttcagt ttgcatcaac atcgaaccca ccgtccaagt
     7261 aatttttcac tctcagttgt tatggtggcc atgggaggac ttgaaagaga gcactgacta
     7321 cagtggaagc agcattgatg ggcaccaaga agagattcta gtgcccctga gtcagcatgt
     7381 tagcatcatc agataaacta gtatatttac catcctgtgg gaaccagtct taccaaacac
     7441 agcagctgcc tcctgggaac cacatcgagg ggagagtcag agaaacacct ggcagtgaag
     7501 tattctaata tcagaagtgg cacttgtgac ttcaagggaa ggctgactac ccaggattgc
     7561 ttcacgtctg atgcgtgtgg aatggggact caaggtgtag ccgctttgag tgcaggtact
     7621 gtccagcaga cagacaattg agcatgtact cagattcttc ccccaaaggg tactgacgtc
     7681 tgctcctccc tcaaggtctg atgtgggagc caaggcaatg agctcagatg ccagacttga
     7741 gctacactgc ttcatcgtag tcctcaacat tctgggcttt acccagtctg ctacacccaa
     7801 ccctgctcca gtctgctgct gcctgtgtgg attctgagtc caagagaatc agaaacagct
     7861 cctcagtgtg aactgaaagg acttagcatt gacagaactt gtgaaccggc cgaaaagcag
     7921 gcaaacatct ttgtaatcac aggggttttt gtgcgttttc ttgatgtttc tcccattgac
     7981 ttagtctgtc actattgatc acattatata gagcatcttg ttcaagtttt gttttttagc
     8041 taaaaacact tctttggtaa acttttaata ctgtaatttt tttcctctag aatattttcg
     8101 agtgtacttt taagactctt tttcccttga aacatatcag aattttaaaa caggaatttc
     8161 ataataaatt tagtaagatt tataagcacc tgccagatct taattcctgt tcttttatac
     8221 tccaatgctt agctgagctg ttagcttttc tctgtagcta atggatgtct caagtctctg
     8281 ccttgtgagg ctgcagacca tgtgttttaa aaactcaaga tgtggggcta gaggcatggc
     8341 tcagtggtta aaagcactga ctgctcttcc agagagatcc tgagttcaat tcccagcaac
     8401 cacatggtgg ctcacagcta tctgtaatgg gatctgatgc cctcttctgg tgcgtctgaa
     8461 gagaatggca tacataaaat cttaaaagaa ttcaagacat gttgggtcat gatgtcatgg
     8521 tcaccttata ggtggagggt aggtacctaa aacaaggaca aaagccagaa gctagtgttg
     8581 ataatttcct tctggttgaa ggaggagggg aggctcaaga cattaagctt cacatgtctt
     8641 ggaaagctga agcccaagag ccacaaagtg cttccccaag gttgtagaaa tggacaggac
     8701 agaaggggac aggttgactg ttagcagcag agctccccag aggaggcctg gctgcctggg
     8761 aggcgattcc ctgactagtc aaacagcctg caagttgtgt agagttgttc ttgttgaggt
     8821 gggctttagg tgatacagat gcttctgagt cattcctgtt cttggaacac caccagcccc
     8881 tattcttata agtgacccca ataaactcat tgaattgcta agtgga
//
