LOCUS       XM_039082230            8676 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus angiomotin-like 1 (Amotl1), transcript
            variant X1, mRNA.
ACCESSION   XM_039082230
VERSION     XM_039082230.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082230.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8676
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8676
                     /gene="Amotl1"
                     /note="angiomotin-like 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 71
                     ESTs, 4 long SRA reads, 6 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 4 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:315430"
                     /db_xref="RGD:1305268"
     CDS             271..3300
                     /gene="Amotl1"
                     /codon_start=1
                     /product="angiomotin-like protein 1 isoform X1"
                     /protein_id="XP_038938158.1"
                     /db_xref="GeneID:315430"
                     /db_xref="RGD:1305268"
                     /translation="MQAFDESCMHEGLGGSMDLSGNWTLEDGSWLSPTGDRHFPNGRG
                     ESDFVDTTPASFSPEELAPPPICYSPGSPAQILEDHAYFYPDLQLYSGRHEAPTLTVE
                     ANGGLRGKSVEDPLSSFHSPNFLRTPEVEMRGSEDVASGRVLQRLIQEQLRYGTPTEN
                     MNLLAIQHQATGSAGPAHSTNNFSSTETLTQEDPQMVYQSARQEPQGQEHQGDNTVME
                     KQVRSTQPQQNNEELPTYEEAKAQSQFFRGQQQQQQQQQQQQQQQGQGPLGHTYYMAG
                     GTSQKSRTEGRPTVNRANSGQAHKDEALKELKQGHVRSLSERIMQLSLERNGTKQHLP
                     SSGNGKSFKAGGEPSPAQPVCKALDPRGPPPEYPFKTKPMKSPVSKNQDHGLYYSDQH
                     PGVLHEMVKPYPAPQPARTEVAVLRYQPPPEYGVTSRPCQLPFPSTVQQHSPMSSQTS
                     SISGPLHSVSLPLPLPMSLAAPQPPPASPSQQLGPDAFAIVERAQQMVEILTEENRVL
                     HQELQGCYDNADKLHKFEKELQSISEAYESLVKSTTKRESLDKAMRNKLEGEIRRLHD
                     FNRDLRDRLETANRQLSSREYEGHEDKAAESHHMSQNKEFLKEKEKLEMELAAVRTAS
                     EDHRRHIEILDQALSNAQARVIKLEEELREKQAYVEKVEKLQQALTQLQSACEKRGQM
                     ERRLRTWLERELDALRTQQKHGNGQPVNLPEYNAPALMELVREKEERILALEADMTKW
                     EQKYLEESTIRHFAMSAAAAATAERDTTISNHSRNGSYGESSLEAHIWPEEEEVVQAN
                     RRCQDMEYTIKNLHAKIIEKDAMIKVLQQRSRKDAGKTDSSSLRPARSVPSIAAATGT
                     HSRQTSLTSGQLAEDKKEEKTWKGSIGFLLGKEHQGQASAPLLPATPASALSPPTSTT
                     SASSTHAKTGSKDSSTQTDKITELFWPSMASLPSRGRLSTAPSNSPVLKHPAAKGTVE
                     KQENSPGHGKSSEHRGRVSSLLQKPEFPDGEIMEVLI"
ORIGIN      
        1 agggctgaac gtgtctgggc aatgcctgtg gctctggatg gagtcatcac ggatgaggca
       61 gccgagttgg ctcggtcagg gagcactcgc tgctcttttt aaactccacg gcaccaggga
      121 tgaagtcacc ttttaaaact agctgacttg ttcgtgagtc gctgtcactg ctgttagaac
      181 ttagtggttt ttttttccca cggctgggca ccagaacttt ctctcaggca tgtagcagga
      241 gacaaagggg cccaggatct ctgccccgac atgcaggcgt ttgatgagag ctgcatgcac
      301 gaggggctag gtggaagcat ggatctcagt ggaaactgga ctctggagga cggaagctgg
      361 ctgtcaccca ctggggatcg ccacttcccc aacggcagag gcgagagtga ttttgtggac
      421 accactcccg catctttcag cccggaggag ttagctcctc cccccatctg ctacagcccc
      481 ggcagtcctg cgcagattct agaagaccac gcctacttct acccagactt gcagctctat
      541 tctgggaggc atgaagcacc tactttgaca gtggaggcaa acggaggcct gagggggaaa
      601 agcgtagagg accctctctc cagcttccac tccccaaact tcttgaggac gccggaggtg
      661 gaaatgagag gttctgagga tgtagcttct ggaagagtgt tacagcggct gatccaggaa
      721 caactgcgct atggcacccc aaccgagaac atgaacctgc tggccattca gcaccaggcc
      781 acagggagtg cagggccagc ccacagcacc aacaactttt cttccacgga aaccctcact
      841 caagaagacc cacaaatggt ctatcagtcg gcccgccaag aaccgcaggg tcaagaacat
      901 cagggagaca atacggtgat ggagaagcag gtccggtcca cacagcctca acagaacaac
      961 gaggagctgc ccacgtacga ggaggccaag gcccagtccc agttcttcag gggacagcag
     1021 cagcagcagc aacagcagca gcagcaacaa caacagcagg gacaggggcc cctcggccac
     1081 acttactaca tggccggagg taccagtcag aagtcccgca ccgaggggag gcccaccgtg
     1141 aaccgggcca acagcggaca agcacataag gatgaggccc taaaagaact aaagcagggc
     1201 catgtccggt ccctcagtga gaggatcatg cagctgtcgc tggagaggaa tggaactaag
     1261 caacacctcc ccagctcggg aaatggaaag agcttcaaag ctggaggaga gccatctcct
     1321 gcccagcccg tctgtaaagc actggaccct cgtggccctc cacctgaata ccccttcaag
     1381 accaagccaa tgaaatcccc agtcagcaag aaccaagatc acggtcttta ctacagtgac
     1441 cagcaccctg gggtactcca cgagatggtc aaaccttacc cagcacctca gcctgcgaga
     1501 acagaagtgg ccgtcctgag gtaccagcca cccccagagt atggcgtcac cagtcgcccc
     1561 tgccagctgc cttttccctc cacggtgcag cagcatagcc ccatgtcctc tcagacttcc
     1621 tccatcagtg gtcctctgca ctcggtctcc ctgcctcttc cacttcccat gagcctggcg
     1681 gctccacagc ccccaccggc ctcccccagc cagcagctcg gaccagatgc cttcgcgatt
     1741 gtggagagag cccaacaaat ggtagagatc ctcacagagg agaaccgtgt gcttcaccag
     1801 gagcttcagg gctgctatga caacgccgac aagctccaca agtttgaaaa agagctgcag
     1861 agtatctcag aggcctatga gagcctggtc aagtccacca ccaagcgtga gtccctggac
     1921 aaggcaatga gaaacaagct cgaaggcgag ataaggaggc ttcatgactt caacagagat
     1981 ctccgagatc gactggagac agccaacagg cagctgtcca gcagggaata tgaagggcac
     2041 gaagacaaag ctgcagagag ccatcacatg tcccagaata aagaattctt gaaggagaag
     2101 gagaagttgg aaatggagct ggcagcagtg cggacggcga gcgaggacca ccggaggcat
     2161 attgagatcc tggaccaagc tttgagcaat gcccaggcca gagtgatcaa gctggaggaa
     2221 gagttacgag agaagcaagc ctatgtggag aaggtggaga agctgcagca ggccctgacc
     2281 cagctgcagt ctgcgtgtga gaagcgaggg cagatggagc gcaggttgcg gacctggctg
     2341 gagagggagc tggatgctct gaggacacag cagaaacatg ggaatggcca gcccgtcaat
     2401 ctcccggaat ataatgctcc tgccctcatg gagcttgtgc gggagaagga ggagcggatt
     2461 ctagccctgg aggccgacat gaccaaatgg gagcagaagt acctggaaga gagcaccatc
     2521 cgacactttg ccatgagcgc cgccgccgct gccacggccg agagggacac taccatcagc
     2581 aaccactcaa ggaatggcag ctatggtgag agctccctgg aggcccacat ctggccagag
     2641 gaagaggagg tggtgcaggc caacaggcgg tgtcaggaca tggagtacac tattaaaaac
     2701 ctccatgcca aaatcataga gaaggatgcc atgataaaag tcctgcagca gcgatcccgt
     2761 aaggatgctg ggaagactga ctcttccagt ctgcggcctg cccgctctgt cccatccatt
     2821 gctgcggcca ccgggacaca ttcccgtcag acttcactga ccagcggcca gctggcagaa
     2881 gacaagaagg aagagaagac ctggaagggg agtataggat tcctgctggg gaaggagcac
     2941 cagggacagg cttctgcccc tctgctgcca gccacacctg cctctgcact gtccccgccg
     3001 acctccacca catcagccag cagcacccac gccaagacag gcagcaagga cagcagcacg
     3061 cagaccgaca agatcactga gctcttctgg cccagcatgg cttccctccc gagccgcggc
     3121 aggctcagca ccgccccttc caacagcccc gtcctgaaac atccagctgc caaaggaacc
     3181 gtggagaaac aggagaactc tcctgggcac gggaagtcat cagaacacag aggccgagtc
     3241 agcagcttgt tgcagaagcc tgagttcccg gatggagaga taatggaagt gctcatctaa
     3301 ccgtcgtcct gtggagtgtg gtgccagcat gctgacagac gcactagagg ctgcaagaag
     3361 agagaagatc cagatggtca gttgcagtag caactgcaaa accaggacag ctgtggacac
     3421 cgtgtcacag tgttaccaac gcagctggct cgtgtcacag tgttaccaac gcagctggct
     3481 cgtgtcacag tgttaccaac gcagctggct cacttgtctg cagagggagt gaaagagaac
     3541 gcatgcaggc tgagaagcag agttgaggag gagtggaatt ttccattgta gagaaattgt
     3601 atgttttggg gaggttccat gcttccccgt tcttggctga taaacagatg aagaaaagcc
     3661 agcctttcct tggaatgacc ttcttccctt tgtctcttag caggtttggt ttaagaagaa
     3721 tcttggcata atgtagtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     3781 tgtgtgtgtg tccttagcag atacatccag gataatgggg gattccacag gcaagttttg
     3841 tcaccttctt ggctgttttc atttgtggtt tgtggtttca gagagtgtga ggctttgctt
     3901 gtctggattg aatggtattt tctgagcagg atgggagaga gatgcccttg gccctcatcc
     3961 gccctgactt ctttgaactt atctgtcttg tctctactta ttattttgtt gtaatttttt
     4021 tctgtttaat tagacatagc agagttcctt acgtatggga cttaggagac taccatccat
     4081 gctgtggtgt ccaattggac agagcctcct gttgacaccc cggctgcttc cccacacctc
     4141 tgcttagcca aactgcagct gtcaatctta ctgtgagcta gggaaacttg gatgaggagt
     4201 ccatgagtcg atagataggg taacatcgtg ccctgatgtg cctctcattc acatccgctc
     4261 tcttgcaagg aacttgacag tcacacccca atgccctgta ggaaggcttc cttgtgagca
     4321 ggcaccacag gaaccccatg atggcttatg cagagctctc tgggtggctg cgagatctca
     4381 caggcatccc ccagccactt tctgtatcgg aagctctcag ttctgttcat tgctccctct
     4441 ggcctccttc tgccctggct cctgttgatg agcacagtgc cgtccctgat cagttctttc
     4501 ttcctgtgaa tttgcttcgt agcccatcag gctggtagac tggcagcacg gtcagtgtca
     4561 cccgagggac aggacttccc tgaagtgaag cagcaatgtc atggaagcga acccctgtga
     4621 gcgagagaca ggccccgagg ctgctgccac aaggtctcat gttcattgct ggggacacta
     4681 gcttcctaca aaccccagga gacgctgccc atagcacggg tggcccttca ggctcctgaa
     4741 ctatctatcc ccagatcagt aggatttgtt ttccaagtcc ccttcctcat tccttctttg
     4801 ctcaagagaa aaaagaaaag tggtaactct gtgactctaa gtccctctta aatgcagcgc
     4861 tgaatctagc ttggctcgga gatctctgac ttgtccctag ggtgagactg tggcctcccc
     4921 aggttgaggt ggcacgtgta ttgtgagaga ttagcctgga gagcagagaa gagggggagg
     4981 ggggataggg aggagagagc aatcgtgtct ccctacagga ccctgggcca tctgacaaga
     5041 cagaggaggt gggactggct tccccatgct gcacatggca gtgggaacca ggcttggagt
     5101 cccccacccc ctccttaacc tcttctctca gaccttgtag ccctagcttg ccctgtgctc
     5161 tgcagggaag gggatgagag gacagcataa gaagtcttgc cagttgaggt ggggctggaa
     5221 gatgaagcag gtgggtgtag gaatcatttt ggatagggca tgttgtttgg ttgacggcaa
     5281 ctaattctct taagagcata ttgtctccag ttaatgttgg agacaaccca gaaagggaag
     5341 ggtatagaga tgggtaatta atgagatatt ccagccctgg agcaatgtct gagccacccc
     5401 aaacttaggc tgtctcccag cataggagtg gggcactgcc ccttactcaa attctagtct
     5461 aagtgttcca gacacattgt acacttggac aggaaatctc ctgttccagc ataccctctc
     5521 ccccataccc tctcccccat accccctccc ccataccttc tcccccatac tgttagtacg
     5581 tttcagttgt tcaaaagcaa agggggcgca gactaggctt taactgcatg tggagtgtag
     5641 attttgccta agaatccatg ttgaagaaga gagaggctat gtctttaagg tcgaggccct
     5701 tcagtcttct gtccttgtaa ttctcttgaa gcgtgagccc caggcactca gaagccatgt
     5761 tgtactccgg gaagttcatg ggacctgaac tccttcaaca ccgggaacaa cagtactgca
     5821 taggtacttt ggtactgact gtgcaagcac tagaaaaagt acccgttgaa tggccctcac
     5881 agcatcaggg aaacgaggcc gagttcactc tcctgattgc tcagatgcag aagctggacc
     5941 cgtgaggtgt accagcccac ctccaagctt gacacagagg ctagcactta aagcaaagac
     6001 tcagaagagg agtctcagtc acaggctgca cagccttgaa catgatatct agaactatgc
     6061 ctgggtgatc ggtggcccaa cttgtgacac ttgtgtgcac atagggaagc tgacgctcct
     6121 ctcggggcct gaaaacagga ctaaacccaa accccatata actaaccata ccactgccat
     6181 ccacaggcgt ggatggaagt cttcacggtc tgttacaagc acaagtacaa agccgataaa
     6241 aataagtcaa agcccttcct cgtggtgcag agggctcctc ctcagatctc ttggagcctt
     6301 tgatcataga gcttgacggt ctcctctcgg gataaaggac aggtaaaggc tgtggccttc
     6361 agcggtgact gccccacacc ctgctttcct taggggtgga gacaaggaat ggtggggcca
     6421 gtgttgttca gagagaagtc tctctttgga gcccatgtat ggggcttgac cttttgctgt
     6481 gagtgcattt agaggcaagt gaattctggc ctcagtacag agaacccagc ggtttcagca
     6541 ctcaagaaag aagccgcagt gtcccctaca gagaggctct gtcctgcttg gccccagcca
     6601 cctgcgccac acatttaata aagtggctga aactcctcct ttccaagagc tagtgtgctg
     6661 ggtcctgtcc tccccacagc cttctgagtc ccagagactt gtgtgagcag tcggataagg
     6721 ccaatctggg agacagggga tgaccatgac acaaggtgtt tccaggcagg tcccttgtgc
     6781 gtaggctgca gaaagctgtc ctgactggga gcttgggttg tacgaacaca tggtgccttc
     6841 tttgtctgtg ctgaacgagt agggtgtgtt tctctgtgtt ctctgagtaa gatcacaccc
     6901 tctttaagca aaggggtgtt gtggatatta gaagcaagat tgataaatgt tcttaaatgg
     6961 tggtgctaga gaaaagtcag tccccgtaac ttcctaaaag ctgagtcagc cagtctctaa
     7021 gtatgtacat gttggctttc ttctattttt tttctagtta atcagtgtgt tttaaatgtt
     7081 tttagttgat gtgaggattt ttttaaaggc atttgtgtgt ggtgtggctc catgggagat
     7141 aggctgtgta ataagaaccc tcagaagcca gccagtcatc caaggggcgc ccaagttcag
     7201 tggatttctt caggaattgg agagcagtat ttttccctct tttcagtagt atgcctgttc
     7261 tcatttagta atttaatggt atattgcatt atatgtgaat gcatacataa acggtggaat
     7321 ttctcttaat atccaaaaaa gtccttctgt tgccctctga gctctctcct tggggaggac
     7381 tgcagggctc actgtgtaaa atggttgtgg actcctctag cagaatggct tccaaggcct
     7441 ggcccattcc tcagattccc tttgaagtga gaggtcattg tcttttgaga atggatttaa
     7501 gttttggaaa taccccacgc tgttcacagt gcaagcgact gaacacagaa caattagtca
     7561 gaatcagaat cccagggcca tcaagatgac tccacggaaa agggactgcc accaaccaga
     7621 gccaagacct gagtttggtc cccaggaacc ccatggcagc aggagagagt cagccgatgc
     7681 aagtgtcaca cacacacata aacacacaca tacacatgca acacatacac acaaacacat
     7741 acatacacac acacaaacac atacacacat gcacacacac acacacacac acacacacac
     7801 acacagagtt tttggaagaa tatctatgat gtaggaaaag gtttgttagt acctgcaacc
     7861 tctagggcct catttccaag cctgctgctt ctcttgccag gacttatacg tgtgcaaccc
     7921 ctgcgtacac tacagaccta agtacatact cgctaacatg aacacccagt aggtattctg
     7981 taaaacggat atacttaagt gcatgttatt gtcgtgtgtg ccgcgactga gctgtgtctt
     8041 tgtcatgaaa ctttgcttct ttgccaaatt aagactctgc cctccctccg aggaaggaaa
     8101 tatacagcag tttctggaat cagcttctca agttttcccg cctgtgttgt gtttacttgt
     8161 ggctttgcct gagagtctgt cctcacgtac acacctgtga gtatttatta caaggcagaa
     8221 cggggacagg cgtagccata gtacttgtgt ttgaatgttt ccagggaggg acaatggagc
     8281 cccctcctca gtgaggtgct cacagaatct gtgtcaaatt ctgtgaacgg ggtccaacac
     8341 tagtaccagc ttcaccccaa ccctgagtgc cctggagcca ctgccctctc tactgccttg
     8401 tgtgtgcatg ggtgtggttg tgtgtgtgtc tctgttgggg catgtgccgc atttcgcagt
     8461 ggactttggt atccacatgt aacctttggc atctgtgttc ctggaccgca ttgacagatc
     8521 tgtggtgtgc agatctgtgt agatgggtct gtgtgcaaag tggggagtcc cctgaaagtg
     8581 actatggata ttgttggtca gccaaagact ttcctattct ttgctgctta aactttgtgc
     8641 cttaatattg taaatataaa cggttaaaac aagcaa
//
