LOCUS       XM_039100625            6117 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus angiomotin (Amot), transcript variant
            X6, mRNA.
ACCESSION   XM_039100625
VERSION     XM_039100625.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6117
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6117
                     /gene="Amot"
                     /note="angiomotin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 22 ESTs, 2 long SRA
                     reads, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 13 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:300289"
                     /db_xref="RGD:1564027"
     CDS             319..2580
                     /gene="Amot"
                     /codon_start=1
                     /product="angiomotin isoform X2"
                     /protein_id="XP_038956553.1"
                     /db_xref="GeneID:300289"
                     /db_xref="RGD:1564027"
                     /translation="MPRAQQAAAYQPMPADPFAIVSRAQQMVEILSDENRNLRQELDG
                     CYEKVARLQKVETEIQRVSEAYETLVKSSSKREALEKAMRNKLEGEIRRMHDFNRDLR
                     DRLETANKQLAEKEYEGSEDTRKTISQLFAKHKENQREKEKLEAELATARSTNEDQRR
                     HIEIRDQALSNAQAKVVKLEEELKKKQVYVDKVEKMQQALVQLQAACEKREQLEHRLR
                     TRLERELESLRIQQRQGNSQPTNASEYNAAALMELLREKEERILALEADMTKWEQKYL
                     EENVMRHFALDAAATVAAQRDTTVISHSPNTSYDTALEARIQKEEEEILMANKRCLDM
                     EGRIKTLHAQIIEKDAMIKVLQQRSRKEPSKTEQLSSMRPAKSLMSISNAGSGLLVHS
                     STLTGVPIMEEKRDDKSWKGSLGILLGGDYRAEPVPSTPSPVPPSTPLLSAHSKTGSR
                     DCSTQTERGSESTKTAAVTPISVPMAGPVAAAAPAAAINATAATNTATAATNTTIMVA
                     AAPVAVAAAAAPAAATATPSPANAAALAAAAAAAVTPATPVSAATSVSAATSISQAAP
                     VSPAAPVSPAAPVSPAAAGQIAVAASLTSATVSPTPAAATAAGAAAGAGAGAGAGAAA
                     GAAVATVAAAATTTAIQVAPATSAPVPSPASIPAPATAQASAPTPTQASTPAPIEPPT
                     AVPTPTPALVQAEGPASPGASSGPRRLSTPNLMCNPDKPDGPAFHSSTLERKTPIQIL
                     GQEPDAEMVEYLI"
ORIGIN      
        1 ctgggagagg caccatttca gtgggcaaca caggacatcg cctcgctgtc tttctcagcc
       61 aggaactctc agcctcacag ccctacttcg tccttgacag ctggggctgc cagcttaccc
      121 ttgctgcagt ctccaccatc cactcgattg tcttctggtc aacacggctt ggtctcgaac
      181 caaggagacc actctgctca cctgccgagg catcagcagc atcttcttcc gaatcagagt
      241 catcaggggg accactaccg gcacccccag cccagcctga ctccagccca gcagcaacca
      301 ggagaagcct actcagctat gcctcgggct cagcaggcag ctgcttatca gcccatgcca
      361 gctgaccctt ttgccatcgt ctctagagct cagcagatgg ttgagatcct ctctgatgag
      421 aatcgcaact tgcggcagga gttggatgga tgctacgaga aggtggcaag actgcagaag
      481 gtggagactg aaatccaacg ggtctctgag gcatatgaga ccttggtgaa gtcgtcttcc
      541 aaaagagagg ctttggagaa agccatgagg aacaagctgg agggcgagat tagaaggatg
      601 catgacttca acagagatct gcgagaccgt ctcgagactg ccaacaagca gctggcagaa
      661 aaggagtacg aggggtccga ggacaccagg aagaccatct ctcagctctt tgccaaacat
      721 aaggaaaacc agcgggagaa ggaaaagcta gaagctgagc tggctactgc ccgttcaacc
      781 aacgaagacc aaaggcgaca cattgaaatc cgagaccagg cattgagcaa tgcccaggcg
      841 aaggtggtga aactggaaga agagctgaaa aagaagcaag tgtacgtgga caaagtggag
      901 aagatgcaac aggctctggt gcagctccag gcagcatgtg agaagcgtga gcagctggag
      961 caccgactcc ggacacgttt ggagagggaa ctggaatccc ttagaatcca gcagcgccag
     1021 ggcaactctc agcccactaa tgcttcggaa tacaatgctg ctgcactgat ggagctcctc
     1081 cgggagaagg aggagagaat tctggccctg gaagcagata tgactaagtg ggagcaaaag
     1141 tatttggaag agaatgtgat gagacacttt gctctggatg ctgctgcaac cgtggctgcg
     1201 cagagagaca caacagtcat tagccactct cctaacacca gctatgacac agccttagag
     1261 gcccgcatcc agaaagaaga ggaagagatc ctgatggcaa acaagcgttg cttagacatg
     1321 gaaggaagga ttaagaccct ccatgcgcag attattgaaa aggatgccat gatcaaggtg
     1381 ctgcagcagc gctccagaaa ggagcctagt aagacagagc aactgtcatc catgcggcca
     1441 gcgaagtctc tgatgtccat ttccaatgct ggatcaggcc tgcttgtaca ctcatctaca
     1501 ttgactggtg tgcccatcat ggaggagaag cgagacgaca agagctggaa ggggagccta
     1561 ggcattcttt tgggtggaga ctaccgtgct gagcctgtgc catccacacc ttcccctgtg
     1621 cctccatcta ctcctctact ctcagctcat tcgaagactg gcagtcgcga ctgtagcacc
     1681 caaactgagc gcggatcaga gtccaccaaa actgcagctg tcactcccat ctcggttcca
     1741 atggctggtc cagttgctgc tgctgctcct gctgctgcca tcaatgcaac tgctgccacc
     1801 aacactgcca ctgctgccac caacaccact atcatggtag ctgctgctcc agttgctgtt
     1861 gctgctgctg ctgctccagc tgctgctact gccaccccat ctccagcaaa tgctgctgct
     1921 cttgctgctg ctgctgctgc tgctgtcact ccagctactc ctgtctctgc agctacctct
     1981 gtctctgcag ctacttcgat ctctcaggct gctcctgtct ctccagctgc tcctgtctct
     2041 ccagctgctc ctgtctctcc agctgctgct ggtcagattg cagttgctgc atctcttact
     2101 tctgctaccg tttctccaac tcctgctgct gctactgctg ctggtgcagc tgctggtgct
     2161 ggtgctggtg ctggtgctgg tgctgccgct ggtgctgctg ttgccactgt tgctgctgct
     2221 gccaccacta ctgctattca ggttgctcca gctacttcgg ctccggttcc atctccagct
     2281 tcgattccgg ctccagcaac ggctcaggct tctgctccga ctccgactca ggcatcaact
     2341 ccagctccga ttgaacctcc tactgcagtt ccgactccaa ctccagcttt ggttcaagct
     2401 gagggtcctg caagtccagg tgccagttcc ggaccacgcc gtctgtctac accaaatctg
     2461 atgtgcaatc cagataagcc agatggtcct gctttccact ccagcactct ggaaaggaag
     2521 acacccattc agatcctggg gcaagagcct gatgcagaga tggtggaata tctcatctaa
     2581 aggccacatc aagcgctgga gttatcagca agagttcttt ttaataatgt ttccctttca
     2641 tttgtttaat ctggggtgaa gatggggttg ggaggtgggg atgatttttc taaagggact
     2701 ttttattgga ctctggtagt acataagtaa tgccatagaa atgaattcca atctattttg
     2761 gaatccttag ggagtacctc aaaaagatag gttaagcaga atgtgctcta catcttactg
     2821 ttggtcttta tacaaatcat ggactattaa caggtagtga cgtccattga tgttttgaat
     2881 acgcttcaac ttgttttaaa tttcccattt gaggtcactt ttcattgaag aatacagtat
     2941 gtgtagaagg caggttgtaa catgtagtta cgaagtggaa attcagggag agtttgagga
     3001 cttgctactt tgtctagtca ctacctagac aacagccaca gaaaactctt actttgggct
     3061 gagaaaagaa agtgttttag gagctatgga tgctgaagaa aaggtagaga gggttagggt
     3121 aaagaacggt gctggagcca attttctctc ccagttgcca gttaccctgc ctcctcgtaa
     3181 tgatggtatt tctctccatt tcaatggtgc tttggaagtg gattcttttg gtttcttcct
     3241 ggaggttgat acattcatat atatactctg gaataatata tgcatttgga taattaatat
     3301 attgctttca gagggtagga aagtaaatga acagtgatcc atcactgcct ctcttagggg
     3361 attagatgtt agaggccttg atgaagggct gcatgagacg ctgcatgcag acgttagtga
     3421 tctgggtata gtcatgaata tggcccagtc accttaaatt agtccacttg actgacatag
     3481 ccttttcccc ccaacaatgc agactcactg actggtttgc cagtatttgt ttgccaatcg
     3541 tttgcacgat aaggaaacat ctttgctgac aggttgaatg tgttgaattt ctggcaaata
     3601 ctcggaaatg tttctttttt gtttttccaa atccttagca tgtgccttca aaggtatatg
     3661 cagctgtcac ctccaaggaa atagcatgag aaatccaaag taccaggctg cagtcaggag
     3721 cgaggttgat tgcagcaatc tcctcaacta cctcttctca ctaccggtga ctccatcttg
     3781 ggatcccttt gggcagcagc tgggaatgta tacatgggcg agaccaacac gggaccttgc
     3841 catagagctg cctccaagga cacagagggt gtcaggtgtc actggtcctt gtcccttgtc
     3901 tctgcccttc attaaggcaa tagaactaca gatagtacca ttaagatcag ttttcaggac
     3961 tatagggagg ttaagggagg gggctattgg gtaaaggggg tagacattta gagatgtgtt
     4021 aagttagaaa tgagattgat acaagggtat cctgcattat gccatggact atagcggtgg
     4081 ggaagaactt tatttagcaa tatagcatta agtttagtga tgaggaatct gagagttgga
     4141 aaagatcagt gactttttca agatcaccac gcgcatctct ctgttctgcc aattacatgc
     4201 ccattttggt aaacaattat aaaaaagaag gttctgtttt gaagaaagga catcttcata
     4261 gtctagggca tacctacatt atgaaaatct tcttggtgtg aatagattga ttgggtatct
     4321 gaattcttat cttgtctctg ctggagtgcc ttatatgaaa ttgttttttt cctcatccca
     4381 tttaatcatt gagctacatg aaatgcaccc caactgtttt tcactataaa attgggtgtc
     4441 ttgggtcatt ttatgtattc ctctgtgaga ataagagtgc tatatttacc tgtattcttg
     4501 tgtagttcct aattaccttc caaaaggttt atttgtatgt gtgtctgtct gtctgtctgt
     4561 agatgaggga aggcaataca acatctttta actagtatat ttttccacat ttttaatagc
     4621 aaaatgatca tccaatgtat tggtcctcag ttacagagtg aatgccaaat agacatttaa
     4681 aagtgcaagg aaaaaacctg cagacagtag aaaaatcagg cagcaaacac caggagagct
     4741 actttctatt caagcaaatg aatgagaata aaagaaccta catgtcctct catgatgaaa
     4801 acatattgct agaatgtggg ctgactctgg gagccatgat tataatcata tactgtaaag
     4861 tgacagatga aatacattcc tcactgtggc aacaatctct ttagaatcct gtgtttgagg
     4921 aaagaaggaa gtccttgctg aactgttaat ttgaactttc cagaacctct gtgcctatca
     4981 cccaagaggc acttgttctc ttcagttgtc tgtcccaggc aatttgctag aaggacattg
     5041 catgtctaaa agatggaaga agaaagacta tgttggtaga atctgcatag attctacctt
     5101 ttgagaaaat tcctaccacc taccagttta aaaattcaga atatggataa atctcaaatt
     5161 aactcatgtc ttcacggttg cgtgaaagta acatttgggg cctcttcctg ggcttcccag
     5221 aagaggaggg aatatttgtt gtcttaactt ttactgtctg gtcgtctatg aggatcttat
     5281 aatgcattat gttatccccc atgtcccatg tccagcaaaa tttcacttga gggaactata
     5341 cttgatacaa aactattaac attgttgggg aggtaattga acttcctttg aaagtcatgt
     5401 attgtgactg ttgtcttaat gaaggtttta ctttcagtgt tgcttttgat ctgcagggtg
     5461 atggggcagt agaaacttga aacatctgcc atcatcaatg gcaggaaaac tagcaagata
     5521 cctgtcatgt tctcttttta cttttgcact gttgagtggg tctaaccaac ttatttccca
     5581 actacttttt tacatgaaga atctaaatca tgtggcagct taaagtatag atgtatgcgc
     5641 taactttaat aaatgctcat atctgttagc catacagtct gttatcttac atgctccttc
     5701 atacatggaa tgtgttactt aggatatgtt ccttcttaca gaaagtattt tcaaagggaa
     5761 ctattcgctg tgggttcatt gtcactgatt ttggcctgcc acaaccttta gaagttcttc
     5821 tttcgagtgc cgcccattga cattaggaga agggttggaa gcatgtacat tttcttctgg
     5881 tagtaagagt gggttaaaag aagctttcaa atccttctga cctcctttgt ggttaatggc
     5941 atgtgttgaa taagatggct acatgggttt ggcagattgt tcaagaagaa ttacttttgg
     6001 ctaatgtatg tggtctttgt agtggttatg atcctattct gtaaatcaag agacttagat
     6061 caaataaagt taagcctatc ttttcaatga caataaagtt agccgtttta aaatgca
//
