LOCUS       XM_002730211            5477 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus AMMECR nuclear protein 1 (Ammecr1),
            mRNA.
ACCESSION   XM_002730211
VERSION     XM_002730211.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 2, 2024 this sequence was replaced by
            NM_001427680.1.
            
            On Jan 21, 2021 this sequence version replaced XM_002730211.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5477
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5477
                     /gene="Ammecr1"
                     /note="AMMECR nuclear protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 22
                     ESTs, 1 long SRA read, 8 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 156 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:501539"
                     /db_xref="RGD:1561004"
     CDS             65..1069
                     /gene="Ammecr1"
                     /codon_start=1
                     /product="nuclear protein AMMECR1"
                     /protein_id="XP_002730257.1"
                     /db_xref="GeneID:501539"
                     /db_xref="RGD:1561004"
                     /translation="MAAGCCGVKKQKLSSSPPSGSGGGGGASSSSHCSGESQCRAGEL
                     GLGGAGTRLNGLGGLSGGGGSGGGGGCTLSPPQGCGGGGGGGGISLSPPLSCGVGTLL
                     STPAAATASSPSSSSSSPGSRKMVVSAEMCCFCFDVLYCHLYGYQQPRTPRFTNEPYP
                     LFVTWKIGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPMTRDELPRLFCSV
                     SLLTNFEDVCDYLDWEVGVHGIRIEFINEKGSKRTATYLPEVAKEQGWDHIQTIDSLL
                     RKGGYKAPITNEFRKTIKLTRYRSEKMTLSYAEYLAHRQHHHFQNGIGHPLPPYNHYS
                     "
ORIGIN      
        1 gcccccgccg ccagctcgcc tcacttatgg gtcggaagcg ctgcgtgggg gagactgttc
       61 caagatggcg gcgggttgct gtggggtgaa gaagcagaaa ctgtccagtt cgcccccctc
      121 cggctcgggt ggcggtggtg gcgcctcctc ctcctcccac tgcagcgggg agagccagtg
      181 ccgagccggg gagctgggac taggaggcgc cgggacgcgg ctcaacggac tgggcgggct
      241 gagcggcggc ggcggcagcg gcggcggcgg cggctgtacc ctctctcccc ctcagggctg
      301 cggcggcggc ggcggcggcg ggggcatctc gctgtctcca cctctgagct gcggagtggg
      361 aaccctactt tctactccgg ccgccgccac cgcctcctcg ccgtcctcct cgtcttcatc
      421 ccccggctcc cggaagatgg tggtgtcagc ggagatgtgc tgcttttgct tcgatgtgct
      481 ctactgtcac ctgtatggat accagcagcc ccggaccccc cgcttcacca acgagcccta
      541 cccactgttt gtaacgtgga agattggtcg agacaaaaga ctgcgtggat gcataggtac
      601 cttttctgcc atgaatttgc attcaggact cagggagtac acacttacca gtgcccttaa
      661 agacagccgt tttccaccaa tgacaaggga tgagctgcca cggcttttct gctcggtgtc
      721 tctgctcact aactttgaag atgtttgtga ctatttggac tgggaggtgg gtgtgcatgg
      781 cattagaata gaattcatca atgaaaaagg atcaaaacgc accgccacct acctaccgga
      841 ggttgcaaag gagcaaggat gggaccatat tcagaccata gactcattac tgagaaaagg
      901 aggatacaaa gctccaatca ctaatgaatt cagaaaaacc ataaagctga ccaggtaccg
      961 tagtgaaaag atgaccttga gttatgctga ataccttgct catcgccagc atcatcactt
     1021 ccaaaatggc atcgggcatc cccttccgcc atacaaccat tattcctgac actgagccgc
     1081 acaaccagtc actgggcctc actgcagacc tcttcccggg agaccctaca ccttcttggt
     1141 ctagctatct cttttactgt accattttat gatgatagtt tccgttgcca tggtgaagct
     1201 tctacattgt tagttaagac catcatggta acgggtagga caatggcatt tgttaagaag
     1261 atcctgtttt attattttag atcacatatt cttttttgca gcacatacag cttttggggt
     1321 tttctttcct tacaatatta ggtatatata tatttttttt ttgctttact atctcagaca
     1381 ggtttctgtc tttctttgtt cctttttttc ttcctccttc cttcttttga ctgtggatgg
     1441 aagaaagtat gcagtttttg aggatttaat aggtttgtct ttagtattct tcggtaagat
     1501 agtcattttt tgatagctga gtcggggatt aattcataac aaattcaggt atttgtatat
     1561 tactcttgaa tttgcctaaa attctatttg ctatgacagc ttagtatttg ggtcaagtac
     1621 acatttttcc catggttaaa ataagtgagc tttagactaa gtagtgacca ttcagaggtc
     1681 tatgatagga cttgtcacag agagcaagaa actgtttatg ccttctgtgc tgggtattgt
     1741 agaagagact gcgtcatgtc atagaaccaa tttacaacct aaaacactgt tttagaaaag
     1801 cagaagctac ctttcaaatg ggctgcagaa atcattttga aaggcagcgt atattgggaa
     1861 gagatcagat gcagaattta gtgcctttga gaagactata attaagtcaa attaagaggg
     1921 gtttaaaaag gcaatttaga gaaatattct tataaaattt tattgtttct atataagaaa
     1981 caagagatta cacaaattcc ttactccaaa gtattttttt agctgaaaaa aaattatttt
     2041 gagcaaataa ccaaaaagac atttgtctat tttgtattaa tttaaatttg ttagctttag
     2101 gtttcaatga gtcataattg gccagagaca actttagcta ctaagacatg ataaagataa
     2161 tctagtaaaa acaaaagttc atacatacta tgatttcaaa tttgtcatca cagagacaat
     2221 gctgagtttc ggagatacta caaagagttt gaatctttcc gcactacagc ctttcgatag
     2281 aaacacattt ctgtgttaac agataatctg ttagacctgt agagatggca ctcacatgtg
     2341 ttaattagag cccagctcat ttgcagggct attcttccca tggcataatc aaagagaact
     2401 tacgggtgtc aatgggaagg aaacccttat gttagcccca ggaaaaccca cgatgattct
     2461 ggcaaaagat gacctttgtt ttatggtaat atatatatat atatatatat atatgggaaa
     2521 tatatataac tttttcaaac aggaagtcat tagaacaagt ggtgagtgaa atgctgcaga
     2581 atgtatattc tacaactatg acataccgct aattattgaa atagtcaagc ttatacattt
     2641 aattgctgtg acaagtgaca gactggtagt tcagaaaatc cttgtctagt ttgtaattgg
     2701 ctgaatttgt tctccttgcc atcaggtcaa cgtacacagc ttcaggtttt gatgagagtt
     2761 ctttgaagtt tggtatttct tcatccacag aatccactgt tgaagtaacc attttcagtt
     2821 atgatgcctt aactaagaag ccaattgcta gcctgaaagg cagtctcagt agccagttcc
     2881 attgaatcca gagaaaacag aagctgctga gctttagaat gggcttctaa gtcctgttgt
     2941 ttctacttgg acacactttg gggtagatta gactttcagt ataaaagcaa gcggctactt
     3001 gacattatct tgcccttata gggaaagtga gcacaagctg aatggtattg tctgctttta
     3061 caaaaaagaa agagagagag agaccgagag attgagagag agagagagag agattgagag
     3121 agagagagag agagagagag agagagagag agagaagaaa agggggaaag aaaaggagaa
     3181 gaaagagaaa gggaaaaaag aaaagtaatt gtaacataga aaccgaagag agacagacta
     3241 gaccaatatt gtgaaatcca tctaatccat catctcatca tttcaaagct cctcatcctg
     3301 ggtgagctta tggctagatt ttgctgttgt tgttgttgtt gttgttgcta ttgttgtttt
     3361 taaagaaaag atctatcaca tacatatatg catgtatgtg tccatatact tacacatgca
     3421 tacatgcata tgtgtgtgtt tatgtattta acggtgctaa tcaatcttga gcaggtcacg
     3481 tgactggtca tgcggactct aaaatcatat cagatttttt aaaaaatcct tgatatatgc
     3541 agatattata cagattttct tactggtgta ataatgttat actgaagaat aaccatcctg
     3601 caggcttcaa aggacgaggt cagcaatatt tcccaccatg gcttggggga aaaggatagt
     3661 tttgtctcct tttgtattca agttgatgca cagtgcattt ttgtgtctaa gtagttgttg
     3721 actaaaagac tttgtagtgt aaagggtgtt acacaaacta taatggtgtg cttcaaccaa
     3781 accaacgcta ggccctttca ctcttgttgt atattacaaa gctgttaaat atgtgctttg
     3841 aaataacttt gaacatgtgg aaatatgtag catgtgtctt taactcagac aaagattcta
     3901 attgcacaag ttgtgttcta gccagttgtg gtttatttgt tcagaaacac aaatgtgaat
     3961 tgtactcttt atcaccagaa tattgtatga gttccgtgat ctttaaacag ctcagaagta
     4021 atacttgaac ttcatttgag tagcacaaag tttacagagc ccccttttaa atgttaatta
     4081 gttccagcta agttttcctt tttttccttt tttccttttt tcaaatgcaa ctgggtattt
     4141 tttggaaaac aatgtgtatt ttatttttgg tatgtagtaa aaggcttcca cttctggaag
     4201 gttttgttat acttaaaaag gtcagccagg taccagattc taaaacaaca attgccccct
     4261 ccccctcaag tggccttctg attgcacgaa tgtgctacta ccctctccaa tctcccctac
     4321 cctgaggagg tcagtgaaag tgatggagga agtgcaaggc ttgctctccc ctcccctgca
     4381 ccccacacct cacctaggat gtccacttca atgcaaatag ttccattgca cacacacagc
     4441 acaccggaag tttgtatact ggcctctttt cctgtcttca aatgtgcaag aatttgaaac
     4501 tgtcatctgg aataggttcc atctcttatg tgtgttagat caaaccaaag aagcccccag
     4561 ccatgcccaa atgctgctcc aaaagcctgc cttccagtcc ttacaaaaac cttgcaggat
     4621 taaatgtgtt aactttttta tttttgtaca gtttctaagt gattttttgc tagtgacgtt
     4681 aaactgaatt aagtttattt gaggagtgtg agcacctcct ccatttaaat aaactggtga
     4741 ctttcctttt attttttaca agtggaaacc cattgtgtgc ctctcgattt aagggtttct
     4801 gattacatta ttcttatgac cagcattgat cctttatata caaagatatg ttttccttgt
     4861 tttttattac tgtttcagaa gaaaatgaac cttttatttt gctccagacc cagtaactgc
     4921 gctggtactt agaagcactg agaaaataac aaaataaaac aaacaaacaa aaaatacttt
     4981 tgtaagcacc tctgactgct tttgtatatc aaagttgatt acttttgaga tatttggatc
     5041 tagtttctaa gttattttag tgttttatat gtttcccaaa attcctttga atcggtcacc
     5101 agcataaaga gtttttggtg atgcaatggt gagaattgta acaagcaaaa agctacctgg
     5161 agtagctcta ccctcccttc ttagtaacct ggtgttttga ttacagtgag atatcacgga
     5221 ttatctaaaa ccccttcgtt gtaaccaggt cctccctcct tccacactga attgcttact
     5281 agtttgaaga agctattgga agtgggcatt ttgtatgaca tgtatggctt taaaatatta
     5341 aaaatgaaca aaaagacaaa aatatgaaaa ggtttatgtg ggtctgtaag gtatggctgt
     5401 ggaaagacat tgtagtagtt ttgacactat tgttattacc tttaaaatca tttacccaat
     5461 aaaatgttaa aactgaa
//
