LOCUS       NM_001024990            1497 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus amidohydrolase domain containing 2 (Amdhd2),
            mRNA.
ACCESSION   NM_001024990 XM_220243
VERSION     NM_001024990.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1497)
  AUTHORS   Bergfeld,A.K., Pearce,O.M., Diaz,S.L., Pham,T. and Varki,A.
  TITLE     Metabolism of vertebrate amino sugars with N-glycolyl groups:
            elucidating the intracellular fate of the non-human sialic acid
            N-glycolylneuraminic acid
  JOURNAL   J Biol Chem 287 (34), 28865-28881 (2012)
   PUBMED   22692205
REFERENCE   2  (bases 1 to 1497)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CO388545.1 and BC091278.1.
            
            On Feb 26, 2008 this sequence version replaced NM_001024990.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760389,
                              SAMN12840129 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-10                CO388545.1         1-10
            11-931              BC091278.1         1-921
            932-1497            BC091278.1         992-1557
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..1497
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /note="amidohydrolase domain containing 2"
                     /db_xref="GeneID:302972"
                     /db_xref="RGD:1304601"
     exon            1..152
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /inference="alignment:Splign:2.1.0"
     CDS             70..1299
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /EC_number="3.5.1.25"
                     /note="putative N-acetylglucosamine-6-phosphate
                     deacetylase; glcNAc 6-P deacetylase; amidohydrolase
                     domain-containing protein 2"
                     /codon_start=1
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="NP_001020161.2"
                     /db_xref="GeneID:302972"
                     /db_xref="RGD:1304601"
                     /translation="MRSGQSAALAPVLQFTNCRILRGGTLLREDLWVRGGRILDPEKL
                     FFEERRVADEQRDCGGRILAPGFIDVQINGGFGVDFSRATEDVGSGVALVARRLLSHG
                     VTSFCPTLVTSPPEVYHKVLPQIPVKSGGPHGAGVLGVHLEGPFISREKRGAHPEAYL
                     RSFGANAFHDVLATYGPLDNVCIVTLAPELDRSHEVIQALTAKGIRVSLGHSVADLRA
                     AEVAVQSGATFITHLFNAMLPFHHRDPGIVGLLTSDQLPPGHCIFYGMIADGIHTNPA
                     ALRIAHRAHPQGLVLVTDAVPALGLGNGRHTLGQQEVEVDGLIAYIAGTKTLSGSIAP
                     MDVCIRHFLQATGCSVESALEAASLHPAQLLGLEKTKGSLDFGADADFVVLDDTLHVQ
                     ATYISGELVWQAEEAGL"
     exon            153..289
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /inference="alignment:Splign:2.1.0"
     exon            290..429
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /inference="alignment:Splign:2.1.0"
     exon            430..484
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /inference="alignment:Splign:2.1.0"
     exon            485..697
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /inference="alignment:Splign:2.1.0"
     exon            698..786
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /inference="alignment:Splign:2.1.0"
     exon            787..931
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /inference="alignment:Splign:2.1.0"
     exon            932..1039
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /inference="alignment:Splign:2.1.0"
     exon            1040..1108
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /inference="alignment:Splign:2.1.0"
     exon            1109..1210
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /inference="alignment:Splign:2.1.0"
     exon            1211..1472
                     /gene="Amdhd2"
                     /gene_synonym="RGD1304601"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggccggcttc cgattaccac tgctccgggc actgccggcc tgcgcccaaa gggttcagcg
       61 cgactcacga tgcgtagcgg gcagtccgca gcgttggctc ccgtgctcca gttcaccaac
      121 tgccgcatcc tgcgcggcgg cacgctgctc agggaggatc tgtgggtgcg cgggggccga
      181 atcctggacc cagagaagct gttttttgag gagaggcgtg tggctgatga gcagcgggac
      241 tgcggaggcc gcatcctggc gccgggcttt atcgatgtgc agatcaacgg tggatttggt
      301 gttgacttct ccagggccac ggaggacgtg ggttcggggg tcgccctagt ggcccggagg
      361 ctcctgtccc acggtgtcac ctccttctgt cccaccctgg tgacctcccc accagaggtt
      421 tatcacaagg tccttcctca gatccctgtg aagagtggag gtccccatgg ggcaggggtc
      481 ctcggggtgc acttggaagg cccgttcatc agccgggaaa agcggggtgc acaccctgag
      541 gcctacctcc gctcctttgg agccaatgct tttcatgacg tgttggccac gtacggtccc
      601 ctggacaacg tctgcattgt gacacttgcc cctgaactag accggagcca tgaggtgatc
      661 caggcactga cagccaaagg catccgtgta tctctggggc actcggtggc tgacctgcgg
      721 gctgcagaag tagcagtgca gagtggggcc accttcatca ctcacctctt caacgccatg
      781 ttgcctttcc accaccgtga cccaggcata gtagggcttc tgaccagtga ccagctgccc
      841 ccaggccact gtatcttcta tgggatgatt gccgatggca tacacactaa ccctgcagcc
      901 ctgcgcattg ctcaccgggc ccatccccag gggctggtgc tggtcactga tgctgtccct
      961 gccctgggct tgggcaatgg ccgccacacg ctgggacagc aagaggtgga ggtagatggg
     1021 ctcatagcct acattgcagg caccaagacg ctaagtggca gcatagcccc gatggatgtt
     1081 tgcatccggc atttcctgca ggctacaggc tgtagtgtgg agtcggctct ggaagctgca
     1141 tccctccacc ccgcccagct gctggggctg gagaagacca aggggagtct ggactttggt
     1201 gctgatgcag actttgtggt gctcgacgac actctccatg tccaggccac ttacatctct
     1261 ggtgaactgg tgtggcaggc agaggaagct gggctgtgac tgagggtctt ggctggaaag
     1321 gacatttggc tccagctgga cagtgacagg ccgggcagtc catggagctg gtctccaagg
     1381 aggaagctga gagccctgct ccatgtctaa cctcagtcat cacttctgga ggggaggcag
     1441 tggcctggat aaatacagac agcgggactt gcaaaaaaaa aaaaaaaaaa aaaaaaa
//
