LOCUS       NM_001191781            1290 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus amidohydrolase domain containing 1 (Amdhd1),
            mRNA.
ACCESSION   NM_001191781 XM_235065
VERSION     NM_001191781.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Jul 17, 2010 this sequence version replaced XM_235065.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643286.22356.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400, SAMEA5760476
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-146               JAXUCZ010000007.1  29946054-29946199   c
            147-253             JAXUCZ010000007.1  29943706-29943812   c
            254-318             JAXUCZ010000007.1  29943083-29943147   c
            319-596             JAXUCZ010000007.1  29940586-29940863   c
            597-822             JAXUCZ010000007.1  29937895-29938120   c
            823-947             JAXUCZ010000007.1  29933665-29933789   c
            948-1041            JAXUCZ010000007.1  29933258-29933351   c
            1042-1202           JAXUCZ010000007.1  29932282-29932442   c
            1203-1290           JAXUCZ010000007.1  29930966-29931053   c
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q13"
     gene            1..1290
                     /gene="Amdhd1"
                     /gene_synonym="RGD1308879"
                     /note="amidohydrolase domain containing 1"
                     /db_xref="GeneID:299735"
                     /db_xref="RGD:1308879"
     exon            1..146
                     /gene="Amdhd1"
                     /gene_synonym="RGD1308879"
                     /inference="alignment:Splign:2.1.0"
     CDS             13..1290
                     /gene="Amdhd1"
                     /gene_synonym="RGD1308879"
                     /EC_number="3.5.2.7"
                     /codon_start=1
                     /product="probable imidazolonepropionase"
                     /protein_id="NP_001178710.1"
                     /db_xref="GeneID:299735"
                     /db_xref="RGD:1308879"
                     /translation="MNGHRLLLENAQQVVLVCARGELYLTGSELRSLAVLEGASLVVG
                     TDGLIKAVGPADIIRRQFSGETFEERIDCSGKCILPGLVDAHTHPVWAGERVHEFAMK
                     LAGATYMDIHQAGGGINFTVEHTRQASEEELFRSFQQRLQCMMRAGTTLVECKSGYGL
                     NLETELKMLRVIERARRELHLSLSATYCGAHSVPKGKTAVEAADDIISHHLPRLKELS
                     EKGELHVDNIDVFCEKGVFDLDTTRRILEGGKKVGLQINFHGDELHPMKAAELGAELG
                     ARAISHLEEVSDEGIAAMAAAQCSAVLLPTTAYMLRLKQPRARKMLDEGVIVALGSDF
                     NPNAYCFSMPMVMHLACVNMRMSMPEALAAATINAAYALGKSHTHGSLEVGKQGDAII
                     INASRWEHLIYQFGGHQELIDYVITKGKVIYKK"
     exon            147..253
                     /gene="Amdhd1"
                     /gene_synonym="RGD1308879"
                     /inference="alignment:Splign:2.1.0"
     exon            254..318
                     /gene="Amdhd1"
                     /gene_synonym="RGD1308879"
                     /inference="alignment:Splign:2.1.0"
     exon            319..596
                     /gene="Amdhd1"
                     /gene_synonym="RGD1308879"
                     /inference="alignment:Splign:2.1.0"
     exon            597..822
                     /gene="Amdhd1"
                     /gene_synonym="RGD1308879"
                     /inference="alignment:Splign:2.1.0"
     exon            823..947
                     /gene="Amdhd1"
                     /gene_synonym="RGD1308879"
                     /inference="alignment:Splign:2.1.0"
     exon            948..1041
                     /gene="Amdhd1"
                     /gene_synonym="RGD1308879"
                     /inference="alignment:Splign:2.1.0"
     exon            1042..1202
                     /gene="Amdhd1"
                     /gene_synonym="RGD1308879"
                     /inference="alignment:Splign:2.1.0"
     exon            1203..1290
                     /gene="Amdhd1"
                     /gene_synonym="RGD1308879"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggacgacca agatgaatgg ccaccgcctc ctgctggaga acgctcagca agtggtgctg
       61 gtgtgtgccc gcggagagct atatctgaca gggtctgagc tgcgcagcct ggcagtgctg
      121 gagggcgcca gcctggtggt gggcactgat gggcttataa aagctgttgg ccctgctgac
      181 attatccgaa gacagttttc cggagaaacg tttgaagaaa gaattgattg ctctggaaaa
      241 tgcatcttgc caggtttggt ggacgcgcac acacatccgg tgtgggctgg tgaaagagtc
      301 catgagtttg caatgaagtt ggcaggggcc acgtacatgg acatccacca ggctggagga
      361 gggatcaact tcacggtgga gcacacgcgc caagcctcgg aggaggaact gttccgctcc
      421 ttccagcagc ggctgcagtg catgatgagg gccggcacca cactggtgga gtgcaagagc
      481 ggatatggcc tcaacctgga gacagagctc aagatgctgc gtgtaatcga gcgtgcccgg
      541 cgggagctgc acctcagcct ctctgccact tactgtgggg ctcactcagt acccaaaggg
      601 aaaactgctg tggaagctgc tgatgacatc atcagtcacc acctgccaag gctgaaggaa
      661 ctcagcgaaa agggggaact gcatgtggac aacatagacg tgttctgtga gaagggcgtc
      721 tttgatctgg ataccaccag aaggattctg gaaggtggaa aaaaggtggg gttacagatc
      781 aacttccacg gggatgaact ccacccaatg aaggccgctg agcttggggc ggaactagga
      841 gcacgggcga tcagccacct ggaggaagtc agcgatgaag gcatcgctgc catggctgcg
      901 gcccagtgtt ccgctgtcct tctgcccacc acggcctaca tgctgaggct gaagcagcct
      961 cgcgccagga agatgctaga tgagggagtc atagttgctc tgggcagcga tttcaacccc
     1021 aacgcgtact gcttttccat gcctatggtc atgcacctgg cctgtgtgaa catgaggatg
     1081 tccatgccag aggctttggc cgctgccacc atcaatgcgg cttatgcact gggaaagtct
     1141 cacacccacg gatctttgga agttggcaag cagggggatg ccatcatcat caatgcatcc
     1201 agatgggagc atttgattta ccagtttgga ggccatcaag aattaattga ttatgttata
     1261 actaaaggaa aagtcatcta taaaaagtga
//
