LOCUS       XM_002730058            1604 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus alkaline phosphatase, placental
            (Alpp), mRNA.
ACCESSION   XM_002730058
VERSION     XM_002730058.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_002730058.5.
            
            On Jan 21, 2021 this sequence version replaced XM_002730058.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1604
                     /gene="Alpp"
                     /note="alkaline phosphatase, placental; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 Proteins, and 41% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100359675"
                     /db_xref="RGD:2325055"
     CDS             1..1590
                     /gene="Alpp"
                     /codon_start=1
                     /product="alkaline phosphatase, germ cell type"
                     /protein_id="XP_002730104.3"
                     /db_xref="GeneID:100359675"
                     /db_xref="RGD:2325055"
                     /translation="MWGACLLLLGLSLQMSLSLVPVEEENPAFWNRKAAEALEAAKKL
                     QPIQTSANNLIILMGDGMGVSTVTATRILKGQQQGHLGPETPLAMDRFPHMALSKTYN
                     TDKQVPDSAGTGTAFLCGVKTNMKVIGLSAAARFNQCNTTWGNEVVSVMHRAKKAGKS
                     VGVVTTTSVQHASPAGTYAHTVNRNWYSDAHMSTAALQEGCKDIAMQLISNTDIDVIL
                     GGGRKFMFPKGTPDQEYPTDPQQAGTRLDGRNLVQEWLAKHQGAQYVWNRTELIQASL
                     NRSVTHLMGLFEPNDMKYNIDRDPTQDPSLAEMTEVAVHMLSRNPKGFYLFVEGGRID
                     HGHHEAIAYRALTEAVMFDSAVDKADKLTSEKDTMIIVTADHSHVFSFGGYTQREASI
                     FGLAPFKAGDGKSFTSILYGNGPGYKLNNGIRADVTEEESSNPTYQQQAAVPLSSETH
                     SGEDVAIFARGPQAHLVHGVQEQNYIAHVMAFAGCLEPYTDCGLAPPAGRSSAVSPGY
                     ISTLLCLLAGTMLMLMVSAEP"
ORIGIN      
        1 atgtggggag cctgcttgct gctgctgggc ctcagcctac agatgtccct gagcctcgtc
       61 ccagtggagg aggagaaccc agcattctgg aaccgaaagg cagccgaggc cctggaggct
      121 gccaagaagc tgcagcccat tcagacgtca gccaacaacc tcatcatcct catgggggac
      181 gggatggggg tgtccacagt aacggctacc cggatactaa agggacagca gcaaggccat
      241 ctgggacctg agacgccact agccatggac cgcttcccac acatggctct gtccaaaaca
      301 tacaacacag acaagcaggt cccggacagc gcaggcacag gcacggcctt tctctgcggg
      361 gtcaaaacca atatgaaggt cattggcttg agtgcagctg cacgctttaa tcagtgcaac
      421 acaacgtggg gtaatgaggt cgtctcggta atgcaccgtg ctaagaaagc agggaagtct
      481 gtgggagtgg tgaccaccac atcggtgcag catgcctctc cagccggcac ctacgcacac
      541 actgtgaacc gtaactggta ctccgatgca cacatgtcca ctgctgcact acaggagggc
      601 tgcaaggaca tcgccatgca gctcatctcc aacaccgaca ttgatgtgat cctcggtggt
      661 ggccgcaagt tcatgtttcc taagggaaca ccagaccagg aatatccgac tgaccctcag
      721 caagctggaa ccaggctgga tggacgcaat ctagttcagg agtggctggc aaaacaccag
      781 ggtgcccagt atgtttggaa ccgcacagag ctcatccagg cctccctgaa cagatctgtg
      841 acacacctca tgggcctctt tgaacctaat gacatgaaat acaacatcga ccgagaccct
      901 actcaggatc cctccctggc cgagatgaca gaggtggccg tgcacatgct cagcaggaac
      961 cccaaaggct tctatctctt tgtggaaggg ggccgcatcg accatggtca ccatgaagct
     1021 atagcctatc gtgcactgac tgaggctgtc atgttcgact cagctgttga caaggcagat
     1081 aagctcacca gtgagaagga cacgatgatc attgtcaccg ccgaccactc tcatgttttc
     1141 tcttttggtg gttacacaca gagagaggcc tccatttttg ggctggctcc cttcaaggct
     1201 ggggatggca aatcctttac ctcgattcta tacggcaatg gtcctggcta caagctcaat
     1261 aatggcatcc gggctgatgt caccgaggaa gagagcagca accccacgta ccagcagcag
     1321 gcggctgtac ccctgtcgtc agagacccac agtggggagg acgtggccat atttgcgcgt
     1381 ggccctcagg cgcacctggt gcacggagtg caggaacaga actacatcgc tcacgtcatg
     1441 gccttcgcag gctgcctgga gccctacacc gactgcggcc ttgcgccccc tgctggtcgg
     1501 agcagtgcag tgagtccagg ctacatctcc accttgctgt gcctgttggc agggacaatg
     1561 ttgatgctga tggtgtcagc tgaaccctga ctacctgagc tcac
//
