LOCUS       NM_001109384             991 bp    mRNA    linear   ROD 17-JUL-2023
DEFINITION  Rattus norvegicus alkB homolog 7 (Alkbh7), mRNA; nuclear gene for
            mitochondrial product.
ACCESSION   NM_001109384 XM_001053732 XM_001053788
VERSION     NM_001109384.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 991)
  AUTHORS   Solberg A, Robertson AB, Aronsen JM, Rognmo O, Sjaastad I, Wisloff
            U and Klungland A.
  TITLE     Deletion of mouse Alkbh7 leads to obesity
  JOURNAL   J Mol Cell Biol 5 (3), 194-203 (2013)
   PUBMED   23572141
REFERENCE   2  (bases 1 to 991)
  AUTHORS   Fu D, Jordan JJ and Samson LD.
  TITLE     Human ALKBH7 is required for alkylation and oxidation-induced
            programmed necrosis
  JOURNAL   Genes Dev 27 (10), 1089-1100 (2013)
   PUBMED   23666923
REFERENCE   3  (bases 1 to 991)
  AUTHORS   Lee DH, Jin SG, Cai S, Chen Y, Pfeifer GP and O'Connor TR.
  TITLE     Repair of methylation damage in DNA and RNA by mammalian AlkB
            homologues
  JOURNAL   J Biol Chem 280 (47), 39448-39459 (2005)
   PUBMED   16174769
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474092.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001053788.1, XM_001053732.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AW142377.1, CB582677.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q11"
     gene            1..991
                     /gene="Alkbh7"
                     /note="alkB homolog 7"
                     /db_xref="GeneID:679944"
                     /db_xref="RGD:1598126"
     exon            1..230
                     /gene="Alkbh7"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..692
                     /gene="Alkbh7"
                     /note="alkylated DNA repair protein alkB homolog 7; alkB,
                     alkylation repair homolog 7; AlkB-like protein 7"
                     /codon_start=1
                     /product="alpha-ketoglutarate-dependent dioxygenase alkB
                     homolog 7, mitochondrial"
                     /protein_id="NP_001102854.1"
                     /db_xref="GeneID:679944"
                     /db_xref="RGD:1598126"
                     /translation="MAGSWRLAMRLLSGCGWVRGSDSAVLSRLRDEAVVHPGFLSQEE
                     EDTLTRELEPQLRRRRYEYDHWDSAIHGFRETEKSCWSDASQAILQRVRAAAFGPDQT
                     LLSLVHVLDLEHRGYIKPHVDSVKFCGSTIAGLSLLSPSVMKLVHTQEPEQWLELLLE
                     PGSLYILRGSARYDFSHEILRDEESFFGAHRVPRGRRISVICRSLPEGMGPGRPEEPP
                     PAC"
     exon            231..404
                     /gene="Alkbh7"
                     /inference="alignment:Splign:2.1.0"
     exon            405..529
                     /gene="Alkbh7"
                     /inference="alignment:Splign:2.1.0"
     exon            530..991
                     /gene="Alkbh7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcagccttgt gcggtctgtc ctgaagatgg cgggcagctg gaggctagcg atgcgcttgc
       61 tttctgggtg cggctgggtg cgcggctcgg actctgcggt gctgagccgc ctgcgtgatg
      121 aggccgtagt gcatccaggc ttcctgagcc aggaggaaga ggacacgctg acacgcgaac
      181 tggagcccca gctgcggcgc cggcgctacg agtacgacca ctgggactcg gccatccacg
      241 gcttcaggga gacagagaaa tcctgctggt ctgatgcaag ccaggccatc ctgcagcggg
      301 tccgtgccgc tgcctttggt cctgaccaga ccctgctatc tctggtccat gtattggacc
      361 tggaacatcg gggctacatc aagcctcacg ttgacagtgt caagttctgt ggatctacca
      421 tcgctggcct ttccctgttg tctccaagtg ttatgaaact ggtgcataca caggaacctg
      481 agcagtggct ggaactgttg ctggaacctg gttctctcta tatcctaagg ggttcagccc
      541 gatatgactt ctcccatgag atccttagag atgaagaatc attttttggg gcacaccggg
      601 tcccccgggg ccgacgcatc tcagtgattt gccgctccct cccagagggg atggggccag
      661 gaaggccaga agagccacct ccagcctgct aacctctcca catatcctct agacttgtga
      721 ataaagtagg aaaatgattt catgggaatc ttcaaattac catctgccag ggctggggcc
      781 cttaagagat gatcaaggtc tcaggattta catagcatgg tggctgccag ggcgcacccc
      841 atcacacaca ctcttaagac cataagaata tcgtttattg cattcactac tgatagaaaa
      901 caagcaaaaa aaaaaaaaaa aaaaaaaaaa accaaacccc aggtcccctt tctcttctta
      961 atcttctcct atgcaagttt ctaataacgt c
//
