LOCUS       NM_001013943            1715 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus aldolase 1 A retrogene 2 (Aldoart2), mRNA.
ACCESSION   NM_001013943 XM_234254
VERSION     NM_001013943.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Vemuganti SA, Bell TA, Scarlett CO, Parker CE, de Villena FP and
            O'Brien DA.
  TITLE     Three male germline-specific aldolase A isozymes are generated by
            alternative splicing and retrotransposition
  JOURNAL   Dev Biol 309 (1), 18-31 (2007)
   PUBMED   17659271
  REMARK    GeneRIF: Discusses aldolase enzyme retrogenes and splice variants
            in mouse.
REFERENCE   3  (bases 1 to 1715)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC079243.1.
            
            On Apr 20, 2005 this sequence version replaced XM_234254.2.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC079243.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q23"
     gene            1..1715
                     /gene="Aldoart2"
                     /gene_synonym="Aldoal1; Aldoart1"
                     /note="aldolase 1 A retrogene 2"
                     /db_xref="GeneID:299052"
                     /db_xref="RGD:1359133"
     exon            1..1691
                     /gene="Aldoart2"
                     /gene_synonym="Aldoal1; Aldoart1"
                     /inference="alignment:Splign:2.1.0"
     CDS             62..1156
                     /gene="Aldoart2"
                     /gene_synonym="Aldoal1; Aldoart1"
                     /EC_number="4.1.2.13"
                     /note="aldolase A-like 1; aldolase 1 A retrogene 1"
                     /codon_start=1
                     /product="fructose-bisphosphate aldolase"
                     /protein_id="NP_001013965.1"
                     /db_xref="GeneID:299052"
                     /db_xref="RGD:1359133"
                     /translation="MPYPYLALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRL
                     QSIGTENTEENRRFYRQLLLTADDRVNSCIGGVILFHETLYQKTDDGRPFPQVIKSKG
                     GVVGIKVDKGVVTLAGTDGETTTQGLDDLSGRCAQYKQDGADFAKWRCVLKIGKHTPS
                     ALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALS
                     DHHVYLEGTLLKPNMVTPGHTCTQKFSSEEIAMATVTALRRTVPPAVPGVTFLSGGQS
                     EEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKEENKKAAQEEYIKRALA
                     NSLACQGKYTPSDESGAVASESLFISNHAY"
ORIGIN      
        1 gtaccacagc gcttagccaa tccaccagct tcggtgccag gactgtgcta ccaccagcac
       61 catgccctac ccatacctag cactgacccc ggagcagaaa aaggagctgt ctgacatcgc
      121 tcaccgaatt gtggctccgg gcaagggcat cctggctgca gatgagtcca ccggaagcat
      181 cgccaagcgg ctgcagtcca ttggcaccga gaacaccgag gagaacaggc gcttctaccg
      241 tcagctgctg ctgactgccg atgaccgtgt gaattcctgc attgggggcg tgatcctttt
      301 ccacgagaca ctgtaccaga agacggatga tggccgtccc ttcccccaag ttatcaagtc
      361 caagggtggt gttgtgggca ttaaggtgga caagggagtg gtgaccctgg caggaactga
      421 cggcgagacc accacccaag ggctggatga cctgtctgga cgctgtgctc agtacaagca
      481 ggatggagcc gattttgcca aatggcgttg cgtcctgaag attgggaaac acaccccctc
      541 agcccttgcc atcctggaaa atgccaatgt tctggctcgt tacgccagca tctgccagca
      601 gaatggcatt gtacccatcg tggagccaga aatcctccct gatggggacc atgacttgaa
      661 gcgctgtcag tatgtaactg agaaggtact ggccgctgtc tacaaggctc tgagcgacca
      721 ccatgtctac ctggaaggaa ccttgctgaa gcccaacatg gtcaccccgg gccatacttg
      781 cactcagaaa ttttccagtg aagagattgc tatggcaact gtcacagcgc ttcgtcgcac
      841 agtgccccct gctgtccctg gagtcacttt cctgtctgga gggcagagtg aggaagaggc
      901 atccatcaac ctcaatgcta tcaacaagtg tcccttgctg aagccctggg ccttgacttt
      961 ctcctatggt cgagccctgc aggcttctgc cctaaaggcc tggggtggga aggaggagaa
     1021 caagaaggca gcccaggagg agtacatcaa gcgagccctg gccaacagcc tcgcttgcca
     1081 aggaaagtac accccgagtg atgaatcagg ggcggtggct agtgaatccc tcttcatctc
     1141 taaccatgcc tactgagcag aggtgggcta aggctgaccc cccagtaccc cgggtctctg
     1201 cctacccact tgctcttgag gaaaggggcc ttcaggctct ctcccatcaa tccctcttgc
     1261 tgcctctcat gactttggtg tgtggtgttg tctgtgaatg ctgactccat catcccttcc
     1321 agctcgatgc taatcaacaa ccattcaaag gggaggggag aagggccaaa tctgcccctt
     1381 tgtcttaaag atttgttagg cgtggaggcg gcaggtatca cctttttcag ggtatgtctg
     1441 taataccgct taaagaatcc ccactccagc aaccccatgt gtttttaaag tctgcttcaa
     1501 acaggtgttt gctagtttct ttctttctgt ctaggaacta ttgtaacctt gaaagtttgg
     1561 actgttttgg tcagtgggca tttgccaaac ctcgagtcta catatcggta aatgtgcttc
     1621 tgtttaacta tcttttcaca gtcataagag aaataaacat ataaaataaa cgcatctcaa
     1681 tgcatagctg aaaaaaaaaa aaaaaaaaaa aaaaa
//
