LOCUS       XM_039101314            2852 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus aldehyde dehydrogenase 3 family,
            member B3 (Aldh3b3), transcript variant X1, mRNA.
ACCESSION   XM_039101314
VERSION     XM_039101314.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039101314.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2852
                     /gene="Aldh3b3"
                     /note="aldehyde dehydrogenase 3 family, member B3; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 ESTs, 14 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     12 samples with support for all annotated introns"
                     /db_xref="GeneID:688778"
                     /db_xref="RGD:1585230"
     CDS             201..1421
                     /gene="Aldh3b3"
                     /codon_start=1
                     /product="aldehyde dehydrogenase family 3 member B3
                     isoform X1"
                     /protein_id="XP_038957242.1"
                     /db_xref="GeneID:688778"
                     /db_xref="RGD:1585230"
                     /translation="MSEIILCQNEVDLALKNLQTWMKDESVSTNFLTKFSSAFIRKEP
                     FGLVLIIAPWNYPLNLMIMPLVGAIAAGNCVVLKPSEMSKNTEKVLAELLPQYLDQSC
                     FAVVLGGPEETGQLLKHKFDYIFFTGSPRVGKIVMAAAAKHLTPITLELGGKNPCYVD
                     DNCDPQTVANRVAWFRYFNAGQTCVAPDYVLCSQEMQERLVPALQNAITRFYGDNPQT
                     SPNLGRIINQKHFERLQGLLGCGRVAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIF
                     GPILPLVTVRNLDEAIEFINRREKPLALYAYSNNVEVIKQVLARTSSGSFCGNDGFMH
                     MTLSSLPFGGVGSSGMGRYHGKFSFDTFSNQRACLLSCSGMEKLNDLRYPPYSPRRQQ
                     LLRWAMGSQSCSLL"
ORIGIN      
        1 attaggaaac aggcactcag tgttaagttg cttgtccaaa gtctcagtag aggcagttgc
       61 agtccaggat cagtccccat ggcaccacca cacactgttt ataagctcaa aggaactgtc
      121 tcaagcccta gccaagccag agaccccagc ccagccttga atctgacctc cccaccccac
      181 agtcagcctt cgagtcagac atgagtgaga tcatcctgtg tcagaacgag gtggacctgg
      241 ccctcaagaa cctgcagacg tggatgaagg acgagtctgt gtccaccaac tttctcacga
      301 agttcagctc agccttcatc cggaaagagc cctttggcct ggtacttatc atcgctccct
      361 ggaattatcc tctgaacttg atgatcatgc ctctagtggg ggccattgct gcaggaaact
      421 gtgtggtgct gaagccatca gaaatgagca agaacacaga gaaggtgctg gcagagctgc
      481 taccccagta tctggaccag agctgctttg ctgtggtgct gggtgggccc gaggagaccg
      541 ggcagctgct gaagcacaaa tttgactaca tcttcttcac agggagccct cgggtaggca
      601 agatcgtcat ggctgctgct gccaaacacc tgacgcccat caccctggag ctggggggta
      661 agaacccctg ctatgtggat gacaactgcg acccccagac agtggccaac cgtgtggcct
      721 ggttccgcta ctttaacgcc ggccagacct gtgtggcccc ggattatgtc ctgtgtagcc
      781 aggagatgca ggagcggctg gtgcccgccc tgcagaatgc catcacgcgt ttctatggag
      841 acaacccaca gacctccccc aacctgggca gaatcatcaa ccagaagcat ttcgagcggc
      901 tccagggatt gctgggctgt ggccgtgtgg ccatcggggg ccagagcgat gagggggagc
      961 gctacattgc ccccacagtg ttagtggatg tgcaggagac agagcccgtg atgcaggagg
     1021 agatctttgg acccatcctg cccctggtga ctgtgaggaa cctggatgag gcgattgagt
     1081 tcatcaaccg gagggagaag ccacttgcgc tgtatgccta ttccaacaat gtggaggtca
     1141 tcaaacaggt gttggcccgg accagcagtg ggagcttctg cgggaacgat ggctttatgc
     1201 acatgaccct gtccagcctt ccttttggag gagtgggatc gagtgggatg ggcaggtacc
     1261 acggcaagtt ctcctttgac accttttcta atcagcgtgc ctgcctgctg agctgctctg
     1321 ggatggaaaa gcttaatgac ctccgttacc caccctatag tccccgtagg caacagctgc
     1381 taagatgggc tatgggctcc cagagctgct ccctcctgtg aatgtcacct tgactcctct
     1441 ctcttgctgt tctgccccaa catacctgag ctttcagtgg atttcaagtt cccagtggtt
     1501 cctgaaaggc caggtgtctg gtccagcctg tgaacacccc acttctggaa ctctttctga
     1561 acacacctgc agccatgcaa agcctccagg tagctggtcc agcccctgcc tgtagcacag
     1621 caccctcagc agcctcctga ccttctgctt agacagagag attccctcac caagtttggg
     1681 cagacctggt gactgagggg gactttcttt gtcagatcat agcaggatcc caaaagacag
     1741 agcagttgct gacaactcct ggagggtggc tttgtcccac ctgaagtgac atgatcatga
     1801 acccagatca gaataattgg tggaatctgt ctgaagcgtg ttcattagtt actttcctgt
     1861 agcttctatt gaatgccctg atatgcacaa gttcaagaaa agattctctt gtagctcatg
     1921 gtcagagggt tcggtcagcc tcaacatctg atgaagttaa ggatcttgcc aagatcctgg
     1981 ccatccacac aacattcact tcagtcccag gcccctcatc agagggaagc agagggtgag
     2041 aatgtagttc agttgtacag tattttgtca agcatgtgag agaccaggat tactgaagga
     2101 ggaagatgtg tgtggcgtga tgtgttgtga gggaagatag aaaggattca gtagatgtgt
     2161 cctgagacaa aggtcatgta aagacagaag tctgaggagg ggtggctacc aaccaaggat
     2221 gcttggcagc cacctgcagc tggaagggca agtggctcct cccgcacagg cttagggaac
     2281 aggcctcagc atattttttt tctttttccc tctctgagac aaagtctcag tatgtagtct
     2341 tggctgtctt ggaactcctg gcaatcctcc tgcctgggct tcctgagagc tagaactaca
     2401 ggtgtgagcc accatattca gcatggttgt ggatttttgt cttcagtgtt gtgagagagc
     2461 acagctctgc tgtctcggcc actttgggac atttgtctca gcagcctggc acaggaccga
     2521 gaggggtaca ggaagctccc taatggtttg attccactct gcccatcgct ctcaggatca
     2581 caactgtgca ggttcctccc tggtttggtt ttctttaaaa tgcttctcca ctaagtcagc
     2641 ttctccactg agtcagcttc acacagcctg tagcctccat acagtgtagc tacacaactc
     2701 agggtaggaa gtcatctttg ggatccacct gctactccta ggcaaggtca ccccagagaa
     2761 gccatctcat gtcccctcgg ctcctactgt gcttccttcc tgggcccaca tgggcattta
     2821 gctctgaaac taacaaagat tcatggagca ga
//
