LOCUS       XM_039101313            2282 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus aldehyde dehydrogenase 3 family,
            member B2 (Aldh3b2), transcript variant X2, mRNA.
ACCESSION   XM_039101313
VERSION     XM_039101313.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..2282
                     /gene="Aldh3b2"
                     /note="aldehyde dehydrogenase 3 family, member B2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 ESTs, 19 long SRA reads, 13 Proteins"
                     /db_xref="GeneID:688800"
                     /db_xref="RGD:1584166"
     CDS             99..1352
                     /gene="Aldh3b2"
                     /codon_start=1
                     /product="aldehyde dehydrogenase family 3 member B2
                     isoform X2"
                     /protein_id="XP_038957241.1"
                     /db_xref="GeneID:688800"
                     /db_xref="RGD:1584166"
                     /translation="MQSLQSAFESDMSEIILCQNEVDLALKNLQTWMKDESVSTNFLT
                     KFSSAFIRKEPFGLVLIIAPWNYPLNLMIMPLVGAIAAGNCVVLKPSEMSKNTEKVLA
                     ELLPQYLDQSCFAVVLGGPEETGQLLKHKFDYIFFTGSPRVGKIVMAAAAKHLTPITL
                     ELGGKNPCYVDDNCDPQTVANRVAWFRYFNAGQTCVAPDYVLCSQEMQERLVPALQNA
                     ITRFYGDNPQTSPNLGRIINQKHFERLQGLLGCGRVAIGGQSDEGERYIAPTVLVDVQ
                     ETEPVMQEEIFGPILPLVTVRSLDEAVNFINQREKPLALYAFSNNGQVVTQMLECTSS
                     GSFGGNDGFLYLTLPALPLGGVGNSGMGRYHGKFSFDTFSHQRACLLSSPGMEKLNDL
                     RYPPYGTWDQQLISWAMGSQSCTLL"
     polyA_site      2282
                     /gene="Aldh3b2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtggatttca agttcccagt ggttcctgaa aggccaggtg tctggtccag cctgtgaaca
       61 ccccacttct ggaactcttt ctgaacacac ctgcagccat gcaaagcctc cagtcagcct
      121 tcgagtcaga catgagtgag atcatcctgt gtcagaacga ggtggacctg gccctcaaga
      181 acctgcagac gtggatgaag gacgagtctg tgtccaccaa ctttctcacg aagttcagct
      241 cagccttcat ccggaaagag ccctttggcc tggtacttat catcgctccc tggaattatc
      301 ctctgaactt gatgatcatg cctctagtgg gggccattgc tgcaggaaac tgtgtggtgc
      361 tgaagccatc agaaatgagc aagaacacag agaaggtgct ggcagagctg ctaccccagt
      421 atctggacca gagctgcttt gctgtggtgc tgggtgggcc cgaggagacc gggcagctgc
      481 tgaagcacaa atttgactac atcttcttca cagggagccc tcgggtaggc aagatcgtca
      541 tggctgctgc tgccaaacac ctgacgccca tcaccctgga gctggggggt aagaacccct
      601 gctatgtgga tgacaactgc gacccccaga cagtggccaa ccgtgtggcc tggttccgct
      661 actttaacgc cggccagacc tgtgtggccc cggattatgt cctgtgtagc caggagatgc
      721 aggagcggct ggtgcccgcc ctgcagaatg ccatcacgcg tttctatgga gacaacccac
      781 agacctcccc caacctgggc agaatcatca accagaagca tttcgagcgg ctccagggat
      841 tgctgggctg tggccgtgtg gccatcgggg gccagagcga tgagggggag cgctacattg
      901 cccccacagt gttagtggat gtgcaggaga cagaacctgt gatgcaggag gagatctttg
      961 ggcccatcct gcccttggtg actgtgcgga gcctggatga ggccgttaac ttcattaacc
     1021 agcgggagaa gccactggca ttgtatgcct tctccaacaa tggccaggtg gtgacccaga
     1081 tgttggaatg caccagcagc ggtagcttcg gaggcaacga cggcttcctc tacctgaccc
     1141 taccagctct gcccctgggg ggagttggta acagtgggat gggcaggtac catggcaagt
     1201 tctcctttga caccttctcc caccagcgtg cctgcctgct gagcagccct gggatggaaa
     1261 agcttaatga cctccgttac ccaccttatg gtacctggga ccaacaactg ataagctggg
     1321 ctatgggctc ccagagctgc actctcctgt gaatgtcacc ctgagtcctc tctcttgctg
     1381 tcccgcccca acctacctga gctttcagcg gcttccaatt ccccagtggt tcctgaaagg
     1441 caggtgtctg gtccagcctg tgaacacccc acttctggaa ctctttctgg acacacctgc
     1501 agccatgcag aaccaccagg caggtggctg gtccagcccc ttcctgtagc acagcacccc
     1561 cagcagcctc ctgaccttct gcctagacag agagattccc tcaccaagtt tgggcagacc
     1621 tggtgactga ggggctcttt ctttgtcaga tcatagcagg gtcccaaaag acagtgcagt
     1681 tgctcacaac tccatccaca cctgaagggt gctttgtccc acctgaagtg acatgatcat
     1741 gaacccagat cagaataatt ggtagaatct gaagttactt tcctgtagct tctattaaat
     1801 gacctggcat gagcaacttc tggaggaaaa gatttactca tggctcacgg ctcatggcac
     1861 cagaaggttc catgccccaa gacatagcag acgtgacaga atacaggtta gttcatagga
     1921 tggcaggcca ggaaacagca tgaataagaa ggaaagcatg gttgattagt tatgtctgct
     1981 ctgggcccag gcaagggtgt gtgtatatgt attggccaca tctgcactcc tagaaagatg
     2041 taatgagagg tagaatatga aatttgatat agctcagtgg ttaaaagcac tggctgctct
     2101 tccgaggatt cagtcccagc acccacttgg cagcttacaa tcatctagaa ctccagttcc
     2161 aaggcgtcca tcacattctt cgggcttcag caagaaccaa gcacgcatat gatgctcaga
     2221 catccatgta ggcagaatat atatacatgg aaaataaaat aacaaaatct tgaaaaaatg
     2281 ga
//
