LOCUS       NM_001033706            2591 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus aldehyde dehydrogenase 16 family, member A1
            (Aldh16a1), mRNA.
ACCESSION   NM_001033706 XM_341854
VERSION     NM_001033706.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2591)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC101860.1.
            
            On Sep 25, 2005 this sequence version replaced XM_341854.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC101860.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..2591
                     /gene="Aldh16a1"
                     /note="aldehyde dehydrogenase 16 family, member A1"
                     /db_xref="GeneID:361571"
                     /db_xref="RGD:1566295"
     exon            1..147
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     CDS             58..2466
                     /gene="Aldh16a1"
                     /note="aldehyde dehydrogenase 16A1"
                     /codon_start=1
                     /product="aldehyde dehydrogenase family 16 member A1"
                     /protein_id="NP_001028878.1"
                     /db_xref="GeneID:361571"
                     /db_xref="RGD:1566295"
                     /translation="MAATRIQPSTREIFTTLEYGPVPESHACALAWLDTHNRLLGHYV
                     NGMWLKPEHRNPAPCQDPITGENLASCLQAEAEDISAAVEAARITFKTWSQLPGTARG
                     QHLTRLAKVIQKHQRLLWTLESLVTGRAVREVRDGDIPLAQQLLHYHALQAHAQDSAL
                     ADWEPLGVIGLILPTSFSFLDMMWRVCPALAMGCTVVALVPPSFPTPLLLAQLAGELG
                     SFPGILNVVCGPVSLGPVLASQPGVQKVAFCGAVEEGRALRQTLAGRGATLGLALGTE
                     SLLLLTDSADVDSAVEGVVDAVWSDRSLGGLRLLIQESVWDEAMKRLQARMAQIRSGK
                     GLDGAVDMGARGAAARDLAQSFVDEAQSQGGQVFQAGDMPSNSPFFSPTLVSGLPPAA
                     PCAQAEVPWPVVMASPFRTVKEALALANGTPRGGSASVWSERLGQALELGYGLQVGTV
                     WINAHGLRDPAVPTGGCKESGSSWHGGPDGLYEYLQLLGTPYRESFLCESLNYDTFGL
                     AVSSSLPSGPETGPSPAPPYGLFVRGRFQSPGTQSSRPIKDSSGKVSSYVAEGGAKDI
                     RGAVEAAHQAAPGWGAQSPRARASLLWALAAALERRKQVLAAQLERHGAAPTVAETEV
                     ELSVRRLQTWATRVQDQGQTLQVTGLRGPVLRLREPLGVLAVVCPDEWPMLAFVSLLA
                     PALAHGNAVVLVPSGSCPLLALEACQDIAALFPAGLVNVVTGDRDHLTRCLALHQDVQ
                     AMWYFGSAQGSQFVEWASAGNLKPVWVNRDFPRAWDVEVQGSEQELSLHAARTKALWL
                     PMGD"
     exon            148..250
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            251..377
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            378..556
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            557..634
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            635..816
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            817..969
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            970..1155
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1156..1251
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1252..1388
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1389..1494
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1495..1625
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1626..1793
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1794..1995
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1996..2181
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            2182..2304
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
     exon            2305..2566
                     /gene="Aldh16a1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccaagttcct ctaggtagaa cgttcagcag tccttcgcgg aaggcgttcg gcgagagatg
       61 gcggctacgc gtatacagcc ctctacccgt gagattttca cgacgctgga gtacggaccg
      121 gtgccggaga gccacgcatg cgcactggcc tggctggaca cccacaatcg cctcttgggc
      181 cactatgtca atgggatgtg gctgaagcca gaacacagga atccagcgcc ttgccaggat
      241 cccatcacag gagaaaacct ggccagctgc ctgcaagcag aggccgagga catctctgca
      301 gctgtggagg ctgcaaggat aacattcaag acctggagcc aactccctgg aactgctcgg
      361 ggccaacatc taacccggct agccaaggtt attcagaagc accagcgcct gctgtggacc
      421 ctggagtccc tggtcactgg gcgggctgtt cgagaagttc gagatgggga tataccactg
      481 gcgcagcaac tgctccacta ccatgccctc caggcacatg cgcaggatag cgcactggca
      541 gactgggagc ccttgggagt cattggcctc atcctgccga cttctttctc attcttggac
      601 atgatgtgga gggtctgtcc tgccttggct atgggctgca ctgtggtggc ccttgtgccc
      661 ccatccttcc caacacctct cctcctggct cagctggcag gggagcttgg ctccttccca
      721 gggatcctca atgtggtatg tggccctgtc tcactggggc ctgtcctggc ctcccaacct
      781 ggagtgcaga aggtggcctt ctgtggcgct gtggaggaag gacgtgctct acgacagact
      841 ctagcaggca ggggagccac actgggcctg gccctgggca cagagtccct gttgctgcta
      901 acagactcag cagatgtgga ctcggctgtg gagggtgttg tagatgctgt ctggtcagac
      961 cgcagcctgg ggggactcag gctcctcatc caggaatctg tatgggatga agctatgaag
     1021 cgactccagg ccaggatggc acagatacgg agcgggaaag gactggatgg ggctgtggac
     1081 atgggggctc gaggagctgc tgcccgagac cttgcccaga gctttgtgga tgaggcccaa
     1141 agccagggtg gacaggtatt ccaagctggt gatatgccct ccaacagccc cttcttctct
     1201 ccaaccttgg tctctggtct tcctccagca gccccatgtg cccaggctga ggtgccgtgg
     1261 cctgtggtta tggcttcacc tttccgcaca gtcaaggagg cactggccct ggccaatgga
     1321 acaccccggg gaggcagcgc cagtgtgtgg agtgagaggc tagggcaggc cctggagctg
     1381 ggctatgggc tccaggtagg cacagtatgg atcaatgctc atggcctccg agaccctgcg
     1441 gtgcctacag gtggctgcaa ggagagtggg tcttcctggc atggagggcc agatggccta
     1501 tatgagtacc tacagctcct gggaacacct taccgggagt ccttcctttg tgagagtctc
     1561 aactatgaca catttggcct tgctgtgtcc tccagcctgc cgtctgggcc agaaacaggg
     1621 ccaagcccag cacctcccta tgggctgttt gtcaggggcc gtttccagtc tcctgggacc
     1681 cagagctcca ggcccatcaa agattcttcg ggcaaagtct ccagctatgt agctgagggt
     1741 ggagccaagg atatccgagg tgctgtggag gccgctcatc aggctgcccc tggctgggga
     1801 gcccagtctc caagggcccg agcaagcctg ctgtgggccc tggcggctgc tctggagcgg
     1861 aggaagcaag tcctggccgc acagctagag aggcacggag cggcgcctac ggttgcggag
     1921 actgaagtgg agctgagtgt gaggcgactc cagacatggg ccacccgggt tcaggaccaa
     1981 ggccagacac tacaggtaac aggattgaga ggccctgtgc tccggcttcg agagccacta
     2041 ggagtgctgg ctgtggtgtg cccagatgag tggccgatgc tggcttttgt gtcactacta
     2101 gcccctgcac tggcccatgg caacgctgtg gtcttagtac ctagtggatc atgtcctctg
     2161 ctggccttgg aagcctgtca ggatatagct gctctgtttc ctgctggcct ggtgaacgta
     2221 gtgacaggag atcgggacca tctgacccgc tgtctggcct tacatcagga tgtccaggcc
     2281 atgtggtact ttggttcagc ccagggctcc cagtttgtgg aatgggcctc tgcaggaaac
     2341 ctcaagcccg tgtgggtaaa cagggacttc ccaagggcct gggatgtgga agtccaaggg
     2401 tcagaacagg agctgagtct tcatgcagca cgaaccaagg ccctgtggct gccaatgggg
     2461 gactgaggtc gaagccaccc actccatctt tcatgccagg gacaccaagt gcttggaacg
     2521 tttctctcag atttcccatg acttcaaata aactgagtga cattgaaaaa aaaaaaaaaa
     2581 aaaaaaaaaa a
//
