LOCUS       NM_001108356            2374 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus albumin superfamily member 1 (Albfm1), mRNA.
ACCESSION   NM_001108356 XM_001072486 XM_003751340 XM_003752714 XM_341193
VERSION     NM_001108356.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Naidu,S., Peterson,M.L. and Spear,B.T.
  TITLE     Alpha-fetoprotein related gene (ARG): a new member of the albumin
            gene family that is no longer functional in primates
  JOURNAL   Gene 449 (1-2), 95-102 (2010)
   PUBMED   19733224
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000014.1 and FQ092274.1.
            
            On or before Aug 28, 2019 this sequence version replaced
            XM_003751340.4, XM_003752714.4, NM_001108356.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments. This RefSeq is based on transcript
            alignments from orthologous data.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643286.38036.1,
                                           SRR26643287.30046.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760389,
                                           SAMEA5760393 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-216               JAXUCZ010000014.1  17809006-17809221   c
            217-268             JAXUCZ010000014.1  17806059-17806110   c
            269-410             JAXUCZ010000014.1  17805516-17805657   c
            411-622             JAXUCZ010000014.1  17796523-17796734   c
            623-755             JAXUCZ010000014.1  17793219-17793351   c
            756-853             JAXUCZ010000014.1  17791091-17791188   c
            854-983             JAXUCZ010000014.1  17788651-17788780   c
            984-1198            JAXUCZ010000014.1  17784814-17785028   c
            1199-1331           JAXUCZ010000014.1  17783130-17783262   c
            1332-1429           JAXUCZ010000014.1  17780987-17781084   c
            1430-1568           JAXUCZ010000014.1  17778383-17778521   c
            1569-1795           JAXUCZ010000014.1  17776668-17776894   c
            1796-1928           JAXUCZ010000014.1  17767073-17767205   c
            1929-2350           JAXUCZ010000014.1  17762616-17763037   c
            2351-2374           FQ092274.1         1-24                c
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..2374
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /note="albumin superfamily member 1"
                     /db_xref="GeneID:360919"
                     /db_xref="RGD:1561929"
     exon            1..216
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     CDS             132..1997
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /codon_start=1
                     /product="alpha-fetoprotein related protein"
                     /protein_id="NP_001101826.2"
                     /db_xref="GeneID:360919"
                     /db_xref="RGD:1561929"
                     /translation="MEIAKALFLIAFFSYDKCESLQTSLLQAARQHVNGQDHLEENLQ
                     ASVSMMVAQFLQDAAYDKVQAIAQELLDLTGKCKLLKPHESPSECAQRLMATFLTHVC
                     GNQGLVDNQVFTDCCKRENAARLRCFLSYKKDDADSRDTPLMPRPELICAMAEEGNVS
                     LKLRYIYEMSRRHPFLYGPTLLTMSACYEIAVQSCCQKENAMECLRTKLEPIRKYIRG
                     ISARHRHLCEIGTKFSEEVASAVELILVTKKQPKANFSEIAKLTRDVKNLHATCCEGN
                     TLACALGRRQLMNYTCSNQDILSSKFAECCEQPEPFRGECIINSENDEEPNLSPLPLT
                     RFTEDQSVCEKFSGNQNDFLQEFLYEYSRRHLELAVPVILRVFETYKRLLEKCCKLEN
                     PLECHHSGKEMLQRVVLESRDRVKTYCDLHKQLGASNFQDRLTVLYTKKAPQLSAQEL
                     VMLGKKMAASANRCCPLRDELQSACLEDQAKLFLGDLCRRHGGKPVNAGVGRCCDDSY
                     AFRKPCFDDLQADGTYISPPLACDQVISLKEDLCQAQDEELQTEKQKLLSNLVKQKPQ
                     TAEEAFHSIGEGFLLLLGKCCHAQRREACFQQEGPQLIMRCQSLLEADSSQSVLL"
     exon            217..268
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     exon            269..410
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     exon            411..622
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     exon            623..755
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     exon            756..853
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     exon            854..983
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     exon            984..1198
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     exon            1199..1331
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     exon            1332..1429
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     exon            1430..1568
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     exon            1569..1795
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     exon            1796..1928
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
     exon            1929..2351
                     /gene="Albfm1"
                     /gene_synonym="Arg"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gttttctgag agtccacggg agctttaaga agaaataata ttcactagaa aagctaatgg
       61 ttaaccttga ttgctcgaaa agaatgtaga agtctttgtt tctgtcaaac ggcgaaactt
      121 cgtctgaaac aatggagatt gctaaagctc tatttttaat tgctttcttc agctatgata
      181 aatgcgagtc tctccaaaca agtttactac aagcagccag gcagcatgtt aatgggcagg
      241 atcacctgga ggagaaccta caagccagtg tcagcatgat ggtggctcag ttccttcagg
      301 atgcagctta tgacaaagtc caagccatag cgcaagagct gctggatctc actggaaagt
      361 gtaagcttct caaaccacac gagtccccct cagagtgtgc tcagcgactg atggctacct
      421 tccttacaca tgtttgcggc aaccaagggc tggtggataa tcaggtgttc actgactgtt
      481 gtaagaggga aaatgcagca agactcaggt gtttcctgtc gtacaagaaa gacgatgcag
      541 acagccgtga cacacccctg atgccaaggc ctgaactgat ctgtgcgatg gcagaggagg
      601 gtaatgtgtc cctgaaattg aggtatatct atgaaatgtc tcggagacat ccattcttat
      661 acggacccac tctcttgacc atgtcggctt gctatgaaat agccgttcag tcatgttgtc
      721 aaaaagaaaa tgcaatggag tgcctgcgga ccaagttaga gcccatcaga aaatatatta
      781 gaggaatatc tgcaaggcat cgtcatttat gtgaaattgg taccaagttc agtgaggaag
      841 tagcaagcgc ggtagaattg attctagtca ctaaaaagca acctaaagcg aatttttccg
      901 aaatcgccaa attgaccagg gatgttaaaa atctgcatgc gacctgttgt gaagggaaca
      961 cattagcctg tgccctgggc aggcgccagc tcatgaacta tacctgctct aaccaggaca
     1021 tcttatccag caagtttgct gagtgctgtg aacagccaga accattccgt ggggaatgca
     1081 tcatcaattc ggaaaatgat gaggaaccca acctctcacc cctgccactc acaaggttta
     1141 ccgaagacca gtcggtgtgc gagaaattca gtggcaacca gaacgacttt ctacaagagt
     1201 ttctttatga atactcaaga agacacctgg agttggcggt ccccgtgatc ttaagagtct
     1261 ttgaaacata taaacgttta ctggagaaat gctgcaaatt agaaaaccct ttggaatgcc
     1321 accactctgg gaaagagatg ctccaaagag tggtacttga gagccgtgac cgcgttaaga
     1381 cttactgtga cttacacaag cagctgggcg ctagcaactt ccaggacagg cttaccgtgc
     1441 tttatactaa gaaagcccca cagctgtctg cccaggagct ggtgatgctc gggaagaaga
     1501 tggcagcgtc tgccaacaga tgctgcccac taagggatga gctgcagtcg gcctgtctgg
     1561 aggaccaggc gaagctgttt cttggagacc tgtgcagaag gcatggtggg aaacctgtca
     1621 atgctggagt gggccgctgc tgcgacgact cctatgcctt cagaaagccg tgcttcgatg
     1681 acctgcaagc tgacgggact tacatttctc cacctttagc ttgtgaccaa gtcatcagcc
     1741 ttaaagagga cctgtgccaa gctcaggacg aggaactcca aactgaaaag caaaagctcc
     1801 tcagtaacct cgtgaagcag aagccacaaa cggcagagga ggcgttccat tccattggcg
     1861 agggtttcct gctcctactg ggcaagtgct gccacgcaca gaggagagaa gcgtgctttc
     1921 aacaagaggg acctcagctg atcatgaggt gccagtccct cttagaggct gactcatccc
     1981 agagcgtgtt gttgtaggat catcgctgtg gaaggtgaca gttgacagag agccttctca
     2041 ttggctcagt gctgtagaag aacactggct ggtccacacc atctttcctt tccctcagca
     2101 gatgatacat ggacacccag atcagtctct cagagctctc ccagctcaag gcctgtctct
     2161 caagtgcagt ggcagaaaca cgaacccaaa gaacactcac ggcctccaga caatttaatg
     2221 tgcagccaca cctccctggg aactgctgtt ggcccctaca gtagacttca aggtcagcat
     2281 ggagctgtct gtgccacttc tgagaatact gacgactggg ggaaatgcag gaataaagtt
     2341 accttcctga aaaaaaaaaa aaaaaaaaaa aaaa
//
