LOCUS       XM_039109353            4137 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus adenylate kinase 4 (Ak4), transcript
            variant X2, mRNA.
ACCESSION   XM_039109353
VERSION     XM_039109353.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039109353.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4137
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4137
                     /gene="Ak4"
                     /gene_synonym="AK 4; Ak3l1; Ak3l2"
                     /note="adenylate kinase 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 52
                     ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 96 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:29223"
                     /db_xref="RGD:2078"
     CDS             228..683
                     /gene="Ak4"
                     /gene_synonym="AK 4; Ak3l1; Ak3l2"
                     /codon_start=1
                     /product="adenylate kinase 4, mitochondrial isoform X2"
                     /protein_id="XP_038965281.1"
                     /db_xref="GeneID:29223"
                     /db_xref="RGD:2078"
                     /translation="MMSELETRSAQHWLLDGFPRTLVQAEALDRICDVDLVISLNIPF
                     ETLKDRLSRRWIHPSSGRVYNLDFNPPQVLGVDDITGEPLVQQEDDKPEALAARLRRY
                     KDAAKPVIELYKSRGVLHQFSGTETNRIWPYVYTLFSNKITPIQSKEAY"
ORIGIN      
        1 ccgcgcggct taaccgcgcc cggaggaggc cgaggctgct cggcaccgcc ttcgattgca
       61 gtgggcgctc gccagtgcgg aggaccctgc acgacaggcc gagggaaacg cgagccgctc
      121 ggcggggacc ctaactggcc tctcatgcgg tctccgaagt tggtgacgtg gcaaaacagt
      181 acctagaaaa aggtcttttg gttccggacc atgtgatcac gcgcctaatg atgtcagaac
      241 tggagacccg gagtgcccag cactggctat tagatggatt cccaaggaca ttagtgcagg
      301 cagaagctct ggacagaatc tgtgatgtgg acctagtaat cagtttgaat attcctttcg
      361 agacacttaa agatcgtctg agccgacggt ggattcaccc ttccagcggg agggtctata
      421 acctagactt caacccacct caagtgctgg gggttgatga catcaccggc gagcctcttg
      481 tccaacagga agatgataaa cctgaagcac ttgctgcccg gctaagacgg tacaaggacg
      541 cagcaaaacc agtcatcgaa ctgtacaaga gccgtggagt gctccaccag ttttctggga
      601 cggagactaa cagaatctgg ccttatgttt acacgctctt ctccaacaag atcacaccca
      661 ttcaatccaa agaagcctac tgagcctgcc atgggaagag ccaagaagac atggttgccc
      721 actcaatcat gcgtgtagtc ttggtgccct ggccgagtta gaagccagct gagatagctt
      781 gcagcatctt ttctagtttg agtgatgatg taatgaggaa aatctagtag gtagaaagag
      841 ttcaggaaga aggaaaccct cctctgcctt tgaaaagagg ctctgcagga gcatcacgcc
      901 cttcacagag aagagtgtag actggctttc cactagtgtt gcacctacac tcttcggtgg
      961 gttaacagcc atgtgctcgc catcagagcc tttttgcatg cagtggtggg ctctcccggt
     1021 ttatcccacc tcccacaggt gattaaacca cagcactgta tgcctgagaa cttgaagggc
     1081 tgtggtcctg gcttgtccac tgccatacgc tctgacaatt gacgctaatt gcactcagtg
     1141 gttgctttac cccggtcgtc cgtcgtccgc cccccccccc ccccccccat ctctcagcat
     1201 cctagtttct attgtctgaa tcttctcatc tgcttgctcc cttctcaggc tattcaggac
     1261 cgtgatagct tctgcattta tcccctccaa cttccttttt acaaactgag aggtaggtga
     1321 ctggattcag tcttttcctt ctcactagga actgacccag gctttcttgg ttaaacagct
     1381 gctctttctt gagcacactc tgtacctttt attgtttaaa aaaagattcc ccccaagtct
     1441 tcagggttct caaaaacaag ggaaatgctt acttgtggaa atatggggtg attgtatctc
     1501 tctgtagcag tcgtagtaat tgtatggaaa tcactggact aatgagatgg ttgggctcaa
     1561 ggcaagatgg gtattgaaca tgctgctaaa tattaacgct gtcagtgttt ttcttctgtg
     1621 agtgactaac cggacggcga gaggtcagta aagggagcaa gcccgaggct tggggcgtct
     1681 tgcactagat atgcatagca cctgcactga gtaagacagc tttaccgttt ggggaacgca
     1741 gaatcttttt gtttgttttc ttcctattcc aaagatgcag tctttaggtg gccataaagt
     1801 ccagaaatga agagactaat attttaccag tcattatgag tcaagaaagc atttgttcaa
     1861 agactctcct ccctggattc cagacttgtt ggccacctcg ttataacttt tactcctctc
     1921 tgggaagagc agggaaatgt cttcccactg ccttaaaaag ctgtcctgca tctacctgtc
     1981 cccaggaggc agttcttcat tactggtggt ggtttagtgt gacatctcat agtctgtctg
     2041 gggtgggcgt gtggggcggg cttagcactt tagtggaatg gagacattat tccattctga
     2101 aggtgtcgtg tgaatcccca gtctgttcac tgccatgcgc tctgtgctaa caagtctgtc
     2161 tttctgcctt catgggccgc ctggactctg gttcctcttg gtcgtcctct catgtgcatg
     2221 ttctatggct gccttggtgg agatgcaggc cagcatcccc cactcgtgct ctccgtgcag
     2281 agaaataagc gtcggaagtg gagcagcatg gtgcaggtct gtgaccatct gggcatcttc
     2341 atggtgctga atgcttggga agctcacatt tggatgtcac ttggtagggg ttgggtgata
     2401 aaagcccagg cttcctggag gagcaggtca agagtgagaa accctgagat tattcccagg
     2461 gaccaaggga agtagagagt taaagggatt cagagtaatc caagagaggt gggaaaactt
     2521 caaacttatt tctcttcctc ttgtagagtc tggggagagc aatagggtgt gagcaggtcc
     2581 ttgcctgcac actcttgttt ctttatgcat ttcaagctta atcgactatg gtagccagca
     2641 ctgggacacc agggtcagga gagcagcaag gggcaaaaag atcttttcca aagtcttggg
     2701 tgatttcatg tccattggtg ttaaggtgtt ttctgcagca gacttggctg ttcttttcta
     2761 aaggattttg gagacataga cattaattaa tactgaaaat gtcttgacag aggtagaatg
     2821 gaaggaacac cttttccttc tcaggccatg gccttccttc aggtggaagc caagaggccg
     2881 ggtggtcttt atattcgcag gctccacccc gctcctcgtt gagtttgctt cccacaatcc
     2941 tcttgcttag aacttgggaa agagcatgtt tattcctcca gtatttatga caaaaaggtg
     3001 ctatgaagga ggccttctga atgaagtgcg cactctcttt ataagccttg tggtgaatct
     3061 tcccaggcac aaccaatttt ccctataaac aagagtccag gatatgaagt cttgcctggg
     3121 ctcttcatat gagtaaacag tagagctatg acttagtccc aggtttccct gcttcagaaa
     3181 ctcttggcct tttactggat gttagctgtc tgtcttggcc taagcaactt ggggctatga
     3241 gcctgcttgt gggctcaggg agagtgacag acatcactgg agtggcggca tgaggctatt
     3301 tcttttgtat tctctgcctg agcaaaaggg gttgctaagt acaaggcttt aaggcaaggt
     3361 tgggtttgga ccaggttaat ctgcctcaat tctaggtgtc aggaagccat gaagccatat
     3421 gaaggaaaac tggcatctac tgaaacatta aaattaacca taaatattac cccttatatt
     3481 tggtgtggca aactgcacaa ttcttgccag aataaatgcc atcagctgcc tcagggcact
     3541 cctcggtttg accattctgt acgtggttgg gtgtgagaga caggctaagt gagtaagcca
     3601 ttgcccacgg ctccacatgg actccctcta gtgacagaca attgtaggaa gcacaacatc
     3661 tttcaataaa agactcttgt ttaaaacctt tgaaaagagt actgcacctt ctctctggga
     3721 ttcgggaaaa gggaagaaaa atgggaaacc cgggctttgt gtgaactgca agaaatggtg
     3781 gggctcaagg cttctctagt tttatgagaa cttgtactac tgaatttgcc aattttgttt
     3841 tctgagctga acggatgtct gggggactat gttgagctgt gatggcgttt cactgtgatc
     3901 cccccaagtt caaggcagtc tttaatgcaa tgttggctta agtcccccgg gagctgacac
     3961 atcagctttc cttcagtgac agttggtgtt caagatgatt ttggcgtatg tgcttaatcc
     4021 agagtctgtt ctgtatgtgc tgtcctaact attcattgta ttaattgatt gttttgttat
     4081 cttgcttgaa gattgatttg tatggaattt gatagaaata aacgtttttc tgcttaa
//
