LOCUS       NM_001109264            1083 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus AFG2 interacting ribosome maturation factor
            (Airim), mRNA.
ACCESSION   NM_001109264 XM_001056801 XM_575907
VERSION     NM_001109264.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Liu,S.S., Zheng,H.X., Jiang,H.D., He,J., Yu,Y., Qu,Y.P., Yue,L.,
            Zhang,Y. and Li,Y.
  TITLE     Identification and characterization of a novel gene, c1orf109,
            encoding a CK2 substrate that is involved in cancer cell
            proliferation
  JOURNAL   J Biomed Sci 19 (1), 49 (2012)
   PUBMED   22548824
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001056801.1, XM_575907.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132299,
                              SAMD00132302 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1083
                     /gene="Airim"
                     /gene_synonym="C5h1orf109; RGD1560436"
                     /note="AFG2 interacting ribosome maturation factor"
                     /db_xref="GeneID:500546"
                     /db_xref="RGD:1560436"
     exon            1..346
                     /gene="Airim"
                     /gene_synonym="C5h1orf109; RGD1560436"
                     /inference="alignment:Splign:2.1.0"
     exon            347..624
                     /gene="Airim"
                     /gene_synonym="C5h1orf109; RGD1560436"
                     /inference="alignment:Splign:2.1.0"
     CDS             350..1003
                     /gene="Airim"
                     /gene_synonym="C5h1orf109; RGD1560436"
                     /note="uncharacterized protein C1orf109 homolog; ribosome
                     biogenesis protein C1orf109 homolog"
                     /codon_start=1
                     /product="AFG2-interacting ribosome maturation factor"
                     /protein_id="NP_001102734.1"
                     /db_xref="GeneID:500546"
                     /db_xref="RGD:1560436"
                     /translation="MAHDQPLLVVQEALKKCFPVVEEQQDLWQSTLQDCLPLLSSLSN
                     LAEQLQAAQSLRFEDVLALRPFPDLQERLRRKQLEAGDIVLDKLTERLATLLRVRNTI
                     SSHVEQVFQTYEQHADVLDIDTLLRPSVVSPSVTDMLEWLQDIDRHFRSSYLKRKHLL
                     SSIHWGDLASIQALPKAWDQISEDECQTLVSDILLSVSFFLEEAGSRAVSGDLEHRS"
     exon            625..804
                     /gene="Airim"
                     /gene_synonym="C5h1orf109; RGD1560436"
                     /inference="alignment:Splign:2.1.0"
     exon            805..923
                     /gene="Airim"
                     /gene_synonym="C5h1orf109; RGD1560436"
                     /inference="alignment:Splign:2.1.0"
     exon            924..1083
                     /gene="Airim"
                     /gene_synonym="C5h1orf109; RGD1560436"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccaatcctta tggagaacta caatgcccag aagtcattga ggcatacgcc atcttttcgc
       61 gactccagag tcgtgctaac tagaactgga gtggtgagtt cggtcttgtg aatgagcaga
      121 cagtgccaag ccccgtgtag tttttgatgt actcagtgtt gacaacccag gatttacgtt
      181 ttcctgttga tttaggaaca gggctggaaa tcttaaagag aggagacaag actccagaag
      241 cactggtccg gggatagaca gaccccaggg cttcgcaatc taaagtagat tgcactgtcg
      301 tttagaaacc ccttcggaag acctgcagtc cttctgcaga gaactgaaga tggctcatga
      361 ccagccgctg ctggttgtgc aggaggccct gaagaagtgc ttccccgtgg tggaggaaca
      421 gcaggacctg tggcagagca ctctgcagga ctgcttgccc ctcctctcct ctctcagcaa
      481 tctggctgag cagctgcaag ctgcacaaag tctgcggttt gaggatgtgc tagcccttcg
      541 tccctttcca gacctgcagg agcgattgag gcgcaagcaa ctagaggctg gtgacattgt
      601 cctggacaag ctaactgaga ggctagccac cctcctcagg gttcgcaaca ccatcagcag
      661 ccacgtggag caggtgtttc agacctatga gcagcatgcg gacgtgcttg acatcgatac
      721 tctcctgagg ccctcggttg tgagcccctc cgtgactgac atgttggagt ggctgcagga
      781 cattgacaga cattttcgaa gctcgtatct gaagagaaag cacctcctct cctccatcca
      841 ctggggagac ttagccagca tccaagcact gcccaaggcc tgggaccaaa tttcagaaga
      901 tgagtgccaa acccttgtgt cagatatcct gttgagtgtc tccttcttcc tggaggaagc
      961 aggaagccgt gcagtatctg gagatctgga gcaccgcagt tgagggctgc cattgttacc
     1021 ctaggctgtt tctaattgag ggtcagtatt gctgcaccct gactcactgc aataccactg
     1081 cct
//
