LOCUS       NM_001173510            5040 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus adenosylhomocysteinase-like 2 (Ahcyl2), mRNA.
ACCESSION   NM_001173510 XM_001062287 XM_231564
VERSION     NM_001173510.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5040)
  AUTHORS   Ando,H., Mizutani,A. and Mikoshiba,K.
  TITLE     An IRBIT homologue lacks binding activity to inositol
            1,4,5-trisphosphate receptor due to the unique N-terminal appendage
  JOURNAL   J Neurochem 109 (2), 539-550 (2009)
   PUBMED   19220705
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FM059920.1, CV113234.1, FN804654.1, CB713115.1, JAXUCZ010000004.1
            and BQ781566.1.
            
            On Oct 12, 2012 this sequence version replaced NM_001173510.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.22251.1,
                                           SRR26643290.15579.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-527               FM059920.1         1-527
            528-1268            CV113234.1         18-758
            1269-1700           FN804654.1         273-704
            1701-1853           CB713115.1         341-493
            1854-4403           JAXUCZ010000004.1  59495334-59497883
            4404-5040           BQ781566.1         1-637               c
FEATURES             Location/Qualifiers
     source          1..5040
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q22"
     gene            1..5040
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /note="adenosylhomocysteinase-like 2"
                     /db_xref="GeneID:312192"
                     /db_xref="RGD:1564895"
     exon            1..390
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     CDS             22..1860
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /EC_number="3.13.2.1"
                     /note="putative adenosylhomocysteinase 3;
                     S-adenosylhomocysteine hydrolase-like 2"
                     /codon_start=1
                     /product="adenosylhomocysteinase 3"
                     /protein_id="NP_001166981.2"
                     /db_xref="GeneID:312192"
                     /db_xref="RGD:1564895"
                     /translation="MSVQVVSAAAAAKVPEVELKDLSPSEAEPQLGLSTATVGAMVPP
                     AGGGDPEAPAPAPAAERPPAPGPGSGPTAALSPAAGKVPQASAMKRSDPHHQHQRHRD
                     GGEALVSPDGTVTEAPRTVKKIQFADQKQEFNKRPTKIGRRSLSRSISQSSTDSYSSA
                     ASYTDSSDDETSPRDKQQKNSKGSSDFCVKNIKQAEFGRREIEIAEQEMPALMALRKR
                     AQGEKPLAGAKIVGCTHITAQTAVLMETLGALGAQCRWAACNIYSTLNEVAAALAESG
                     FPVFAWKGESEDDFWWCIDRCVNVEGWQPNMILDDGGDLTHWIYKKYPNMFKKIKGIV
                     EESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLKRTTDMMFG
                     GKQVVVCGYGEVGKGCCAALKAMGSVVYVTEIDPICALQACMDGFRLVKLNEVIRQVD
                     IVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLRTPELTWERVRSQVDHV
                     IWPDGKRIVLLAEGRLLNLSCSTVPTFVLSITATTQALALIELYNAPEGRYKQDVYLL
                     PKKMDEYVASLHLPTFDAHLTELTDEQAKYLGLNKNGPFKPNYYRY"
     exon            391..499
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            500..643
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            644..744
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            745..847
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            848..942
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            943..1049
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            1050..1166
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            1167..1230
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            1231..1319
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            1320..1390
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            1391..1485
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            1486..1584
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            1585..1653
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            1654..1732
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            1733..1853
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
     exon            1854..5023
                     /gene="Ahcyl2"
                     /gene_synonym="RGD1564895"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggttgcag tggaggcggt gatgtcggtg caggttgtgt cagcagcggc tgccgccaag
       61 gtgcctgagg tggagctgaa ggatctgagc ccctctgagg cggagcctca gttaggactg
      121 agcacggcga ccgtgggcgc catggtaccc ccagcgggtg gcggggaccc agaggctcca
      181 gctccagctc ccgcggcaga gcggcccccg gcccctggcc cgggctcggg gcccaccgcg
      241 gctctcagcc ctgcggcagg gaaggtccct caagcgtcgg ccatgaagcg gagcgaccct
      301 catcaccagc accagcggca tcgcgacggc ggcgaggccc tggtcagccc cgacggcacg
      361 gtcaccgagg cgccgcgcac ggtcaagaag attcagtttg ctgaccagaa gcaggaattc
      421 aacaaacgtc ccaccaaaat tggacgtcgc tctttgtctc gttccatctc tcagtcatct
      481 actgacagct acagctcagc tgcctcatac acagatagct ctgacgatga aacatccccc
      541 agggacaagc agcaaaagaa ctctaagggg agtagcgact tctgtgtcaa gaacatcaaa
      601 caagcagagt ttggacgcag agagattgaa attgctgagc aagagatgcc tgccttgatg
      661 gctttaagga agagagccca aggagaaaag cctttggctg gagccaaaat cgtgggttgt
      721 acgcacatca ctgctcagac ggctgtactt atggagactc tgggtgctct gggggcacag
      781 tgccgatggg ctgcctgcaa catctactcc actctcaatg aagtggctgc tgctctcgca
      841 gaaagtgggt ttcccgtctt tgcctggaaa ggagagtcag aagatgactt ttggtggtgc
      901 attgacagat gcgtgaatgt ggaaggttgg cagccaaaca tgatcttgga tgatggagga
      961 gatcttactc actggattta taaaaagtat cccaacatgt ttaagaaaat caaaggcata
     1021 gttgaggaga gtgttactgg agtccatagg ctgtaccaac tgtccaaagc tgggaagctg
     1081 tgtgttccag ccatgaacgt caatgactca gtcactaaac agaaatttga taacctctac
     1141 tgttgccgtg aatctatcct tgacggactt aaaaggacaa cagatatgat gtttggtgga
     1201 aagcaagtgg tggtctgtgg ctatggagag gtaggaaagg ggtgctgtgc tgctctgaaa
     1261 gccatgggtt ccgtcgtgta cgtaactgaa attgatccca tctgtgccct gcaagcctgt
     1321 atggatggat ttcgactagt gaagctaaat gaagtcatcc ggcaagtgga cattgttatt
     1381 acttgtacag ggaacaagaa cgtggtaacc agagagcact tggaccgtat gaagaatagc
     1441 tgcatcgttt gtaacatggg acattccaac actgagattg atgtggccag cctgcggacc
     1501 ccagaactga cctgggagag agtaagatcc caagttgacc atgtgatatg gcctgatggc
     1561 aagaggatag tactgctggc agagggccgt ctgctgaatc tcagctgctc cacagtgcct
     1621 acctttgtgc tctcaatcac cgctaccact caggctctcg ccttgataga actttacaac
     1681 gctcctgagg gtcgctataa gcaagatgtg tacctgctgc ccaagaagat ggatgagtat
     1741 gtggcaagcc tacacctgcc cacctttgat gcccacctga cagagctgac agacgagcaa
     1801 gccaagtatc tgggactcaa caagaatgga cccttcaagc ctaattacta caggtattaa
     1861 gttcctgtaa tgcaaaccag aagacatgtt aaggaataga accaagcctt ttctccacta
     1921 ctatccaagg aagaacccag caagctgctt ctccaatcag agctgcccgc cgtgctcatc
     1981 ctatgtgtta ggttatttat ttattaaact ctaaagtcct gtgcctgtag ccttggccca
     2041 gagtgtggtt actactcctg gggccgtgag agccacagag gacaggctga ggaaggaaag
     2101 aaatgggcca accattccta gtgcatcatt cgcattattg cccattagtg gagtcctcag
     2161 cgatggccat ttttctttcc aggctcagga gttagttcag ggatgccaga ctccttgtta
     2221 cttagggttt tctggaataa atttcagcag ctgcctttct caaagctttg gtcctttccc
     2281 aggtgaggcc ttttggaagc cactgaatta acaaggcctg aatccacagc cttgatagtt
     2341 actgtcactg ccttccttac aaaaaggctg gtgaggcagg agtggtaagg tcttgtaagc
     2401 tgcaccaaga actcagctgt gcctgtatcc gtgcctactg ggacttcttc tcttacccag
     2461 gactcctttc ttctccttga atactatatc catttcaatg ctttctgttt ctaagagggt
     2521 tgtgactcca cgatcttaac agctctgctg ttggccaggc atttgttttg ctttctaacc
     2581 ctactaaact ctgctcagga agtagccagc tccactggga cccatagttc tgcttccttc
     2641 ccatttaact ggactgtttc ctaggaggcc cccctaactg gcactgtcag aggagagccc
     2701 cttgtggaca gtgcttctgt tgttgcctga aatggcctct ggagctgagt cggcaaaagt
     2761 cttttccagg aaagactttg gagctgggct tcggaagaca ggagactgta atgtgtatcc
     2821 agatgatgaa acctagtttg aggtctggag gttagctcag tggtagagcc cttgcctggc
     2881 atggataagg ctgtgtgctc gatcattggg aactcgggaa agggatgggc actagtttga
     2941 acctcatcag acatccatcc ctttggctgt tggccgtggt gaaagtgaga tctgcaatct
     3001 gatagcttat ctttctttgc tgctgctgca ttgttatgat ctggcccctc tgtttaagga
     3061 ttctgtttca gagagtttct taagtaactc cagcattata aaatagtaat gtaaacagtg
     3121 tgaagtttct cattctaccc aggagttgga ttttctttgg agatggactg aacagtttca
     3181 aggtttccac tgggatcagt tggtttcaag aattaaaacc tggagtgacc ctaggaatct
     3241 tgagctgaat gagtccctct catgcccccc tatttagaag tctccagttt gtttcccatg
     3301 tctctcttac attgttctgc tgtaaagtct caagatcaag gtcattcaaa cagaggacag
     3361 ccagaatcac taaaatcttc aactagatct tctcccctgg ctacaccatc tccactgtct
     3421 cttggtgttt atgtgtgccc cggaagctag tctggaagtg tccttatttt ctaagctagg
     3481 gaaacagaac tgggtaagtg gctgtttacc ttatgaaatg gtatacattc cagctcaccc
     3541 cagaagatgt actctaaaca gggcatgtct gtggctgtat tctgttgtgc aaggaagatc
     3601 acaaacactg aagagttcac caagatagtc agtcctgatt tgtgtgtgaa tagaatgctc
     3661 actctcccac tcccaccccg tgttggtttt ttgttattgt tgttggggtt tgttgttatt
     3721 ttgagatagt ctcactctgt aacccaggct ggactcaaag tcatggcagt cctcctgcct
     3781 tggcctcctg aggccatgtg ctaccgtgcc tggcctctta attggatctg tttagcaaag
     3841 attcatatct ccgtgcctca tctccagagc agattccatt aggcagatat ctggctaggg
     3901 acacccaggt cataacttgg tgattttttg caaagtcttg ctctctacag agcttcctct
     3961 ggctggtact tacacactac actatgccac accatagaga agagatctgc tcaaaaaaaa
     4021 aaaaaagcca tgtgggtttc taagttaagt tgcacctggc tgcccattgt gaggtatctg
     4081 cctgtgagtt gcagatgaca tctgttccct tttctctgga gacctctttg tcatcaacca
     4141 ttaagaaaat agccagaaat agggatataa gtcagtgata ggacacttga ttagcatgtg
     4201 ccaggccctg gggcaaatcc ctagtacagc aggcttgtgg agagttggaa agaaagaaag
     4261 aaggtagccc aggactccta tgtaggctct atcctaatgt tataaccaaa tcattgttcc
     4321 ctctaacctt ggaataagag caaaatcctt attccaactc ttcctctaac aagcactcta
     4381 gcttccagga gacaaggaaa agaaggctgg ttgtctctgg ttatgtgacc ctggacagag
     4441 gggaaatata ccatttatct acaatgaatt tgtgctactt caaggtcttc ttgctgtctc
     4501 agtggaaata ttgtttcctt tttcttgtta aacaaaatgc ctctaatcta ccttccctct
     4561 gccctcctcc ctcctcatgt ttccctcctg ggagagcaag gctccccata gccacacact
     4621 cctgcaaagc ttttgttgct gcttggcttt tctctgaaca gatctgaaat tgctgctcct
     4681 gtggtttcct cagaattaac tttgtcatgg tttaaaaaaa tcagaatgca ttgttgcatt
     4741 aagctttttt aataaaggag aattatggaa agaaaatagg taacaccagc aaattatata
     4801 ttgacattga caagtctaaa catatatata tatacatatc tatgtaaaac acatatctat
     4861 accaataatc atctagttct tactgtcatc ttactgaaag gaacgaagcc tctaaggatc
     4921 accagttctg agaagctctt ggaaatcttt atgtctaagt gattgtatta gatcagcaat
     4981 aatgactatg taatctcgaa aaataaagta ttcttaaaac tgaaaaaaaa aaaaaaaaaa
//
