LOCUS       XM_039108241            2222 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus acylglycerol kinase (Agk), transcript
            variant X6, mRNA.
ACCESSION   XM_039108241
VERSION     XM_039108241.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108241.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2222
                     /gene="Agk"
                     /gene_synonym="RGD1562046"
                     /note="acylglycerol kinase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 22
                     ESTs, 3 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 14 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:502749"
                     /db_xref="RGD:1562046"
     CDS             96..1253
                     /gene="Agk"
                     /gene_synonym="RGD1562046"
                     /codon_start=1
                     /product="acylglycerol kinase, mitochondrial isoform X3"
                     /protein_id="XP_038964169.1"
                     /db_xref="GeneID:502749"
                     /db_xref="RGD:1562046"
                     /translation="MGRSLALWKALVFGNQLIPPNAQVKKATVFLNPAACKGKARTLF
                     EKNAAPILHLSGMDVTVVKTDYEGQAKKLLELMETTDVIIVAGGDGTLQEVVTGVLRR
                     TDEATFSKIPIGFIPLGQTSSLSHTLFAESGNKVQHVTDAALAIVKGETVPLDVLQIK
                     GEKEQPVYAMTGLRWGSFRDAGVKVSKYWYLGPLKTKAAHFFSTLQEWPQTHQASISY
                     TGPTERPPIGPEDAAPRPSLYRRILRRLASFWAQPQDAFSPEVSPEVWKDVQLSTIEL
                     SITTRNTQLDLTSKEDFMNICIEPDTVSKGDFIIIGSKKVRDPGLRAAGTECLHASRC
                     TLSLPEGTEGSFSIDSEEYEAMPVEVKLLPRKLQFFCDPRKREQMLQSTSQ"
ORIGIN      
        1 gcccattttt ctggactcaa ggagaagatg accacattct ttaaaacact tcgaaatcat
       61 tggaagaaaa ctacagctgg cctctgcttg ctgacatggg gaggtcactg gctctatgga
      121 aagcactggt gtttggcaac cagctcattc ctcccaatgc acaagtgaag aaagccaccg
      181 tctttctcaa tcctgcagct tgcaaaggca aagccagaac tctatttgaa aaaaatgctg
      241 ccccaatttt acacctgtct ggcatggatg tgactgtcgt caagacagat tatgagggac
      301 aagccaagaa gctcttggag ttgatggaaa cgaccgatgt gatcattgtt gctggaggag
      361 atggcaccct gcaggaggtt gttactggag tacttagaag aacagatgag gctaccttca
      421 gtaagattcc aattggattt atcccgctgg gacagaccag tagtttgagt cacaccctct
      481 ttgctgaaag tggaaacaaa gtccaacatg tcacagatgc cgcactggcc attgtgaaag
      541 gggagactgt tccacttgac gtcttgcaga tcaagggtga aaaagaacag cctgtctatg
      601 ccatgaccgg cctccggtgg ggatccttca gagatgctgg cgtcaaagtt agcaagtact
      661 ggtatcttgg tcctctaaaa accaaagcag cccacttttt cagcactctt caggagtggc
      721 ctcagaccca tcaggcctcc atctcttaca cgggccctac agagagacct cccattgggc
      781 ctgaagatgc tgctccccgg ccttctctgt acaggagaat attacgtagg cttgcctcat
      841 tctgggcaca gccacaggat gccttctccc cagaggtgag ccctgaggtc tggaaagatg
      901 tacaactgtc caccattgaa ctgtccatca caacccgaaa cacccaactt gacctgacga
      961 gcaaagagga ctttatgaac atttgcattg agcctgacac tgtcagcaaa ggagatttca
     1021 taatcatagg cagtaagaag gtgagagacc ctggtctgcg agcagccggc accgagtgtc
     1081 tccacgccag ccgctgcact ctgtctcttc ctgagggaac tgagggctcc ttcagcatcg
     1141 acagcgagga gtatgaagcc atgcctgtgg aggtcaaact cctgcccaga aaacttcagt
     1201 tcttctgtga tccaaggaag agagagcaaa tgctgcagag cacatcccag tgagcctcag
     1261 ccttgcgggg gcgttcctag gctgccctgc ggcagcactg cggggcgttc ccaggctgct
     1321 cttcaagcca ccagtgggac cataagggaa tgtgtgtgct tctggcccag tgtcacagga
     1381 tcccaaagga attttcatgg caagtacccc caacccgttt gcttcctaga gcacataccc
     1441 tgtcacccaa cctgtggtca gtactctgtt aacccctgct ttccttacgt tgaggcagtt
     1501 gacccctcct acacagtggt tgtctcaggc tgcttcaagg acattcttgc cctcactgag
     1561 ttggaaaggg ctggagtttt gtgattgccc cacagtggag agtagaatct gtagactaag
     1621 ctcctgtttc agttctcaga ccgtcctggg gcctccgggg aagcagctgc tgtctctggg
     1681 tgtctctccc tctttctggg ctctctcatg ggtgctgctc ttttgtgagc tctctgcctt
     1741 ggttggttgg tctcatctgg aaagcaaatg tgaggttgtt ccctcttcag ccttggcaaa
     1801 cgtattgtaa aacgccattt aaaaacaaac tagtgcttcc tcattgtttg tgtgcatgtg
     1861 tacaactgag gctcatgttg aaaactaact gacctggggc ccacccccca aactttgtac
     1921 ctcaacctgg caggaggcca gcgttgctca ttttaaaaga ctgcttccca ggtgaatcaa
     1981 ccataccggg agaaagtgtt ttaaatctac ttcataaact tatatgtatt atatatatat
     2041 ttttaaaaat cacgtttgtg ttgacgtctg ttgtttccat gagaggttaa acacttatca
     2101 gtgtgcttac tagtgttgtg taaatattgt ttaagaataa aagactttca tcattctttt
     2161 aaacagatcc aatgtaattt aaatgcatcc cttatttata aaaattaaat agtaaaccag
     2221 ca
//
