LOCUS       XM_039108240            2384 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus acylglycerol kinase (Agk), transcript
            variant X5, mRNA.
ACCESSION   XM_039108240
VERSION     XM_039108240.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108240.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2384
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2384
                     /gene="Agk"
                     /gene_synonym="RGD1562046"
                     /note="acylglycerol kinase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 22
                     ESTs, 3 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 39 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:502749"
                     /db_xref="RGD:1562046"
     CDS             258..1415
                     /gene="Agk"
                     /gene_synonym="RGD1562046"
                     /codon_start=1
                     /product="acylglycerol kinase, mitochondrial isoform X3"
                     /protein_id="XP_038964168.1"
                     /db_xref="GeneID:502749"
                     /db_xref="RGD:1562046"
                     /translation="MGRSLALWKALVFGNQLIPPNAQVKKATVFLNPAACKGKARTLF
                     EKNAAPILHLSGMDVTVVKTDYEGQAKKLLELMETTDVIIVAGGDGTLQEVVTGVLRR
                     TDEATFSKIPIGFIPLGQTSSLSHTLFAESGNKVQHVTDAALAIVKGETVPLDVLQIK
                     GEKEQPVYAMTGLRWGSFRDAGVKVSKYWYLGPLKTKAAHFFSTLQEWPQTHQASISY
                     TGPTERPPIGPEDAAPRPSLYRRILRRLASFWAQPQDAFSPEVSPEVWKDVQLSTIEL
                     SITTRNTQLDLTSKEDFMNICIEPDTVSKGDFIIIGSKKVRDPGLRAAGTECLHASRC
                     TLSLPEGTEGSFSIDSEEYEAMPVEVKLLPRKLQFFCDPRKREQMLQSTSQ"
ORIGIN      
        1 gagggccgct ggctgtgtgt ggtcagggta tggggcgcag ccgtgggttg ctacgctgag
       61 cagggccgga acccgccagc ggtcccggga tcggccacgc ggttgttgac cgcagcgcgg
      121 cgggaggagg aaagattggg ccgggccggc gtggcgcgca cgcccgtggt ccctgtgagt
      181 caggagaaga tgaccacatt ctttaaaaca cttcgaaatc attggaagaa aactacagct
      241 ggcctctgct tgctgacatg gggaggtcac tggctctatg gaaagcactg gtgtttggca
      301 accagctcat tcctcccaat gcacaagtga agaaagccac cgtctttctc aatcctgcag
      361 cttgcaaagg caaagccaga actctatttg aaaaaaatgc tgccccaatt ttacacctgt
      421 ctggcatgga tgtgactgtc gtcaagacag attatgaggg acaagccaag aagctcttgg
      481 agttgatgga aacgaccgat gtgatcattg ttgctggagg agatggcacc ctgcaggagg
      541 ttgttactgg agtacttaga agaacagatg aggctacctt cagtaagatt ccaattggat
      601 ttatcccgct gggacagacc agtagtttga gtcacaccct ctttgctgaa agtggaaaca
      661 aagtccaaca tgtcacagat gccgcactgg ccattgtgaa aggggagact gttccacttg
      721 acgtcttgca gatcaagggt gaaaaagaac agcctgtcta tgccatgacc ggcctccggt
      781 ggggatcctt cagagatgct ggcgtcaaag ttagcaagta ctggtatctt ggtcctctaa
      841 aaaccaaagc agcccacttt ttcagcactc ttcaggagtg gcctcagacc catcaggcct
      901 ccatctctta cacgggccct acagagagac ctcccattgg gcctgaagat gctgctcccc
      961 ggccttctct gtacaggaga atattacgta ggcttgcctc attctgggca cagccacagg
     1021 atgccttctc cccagaggtg agccctgagg tctggaaaga tgtacaactg tccaccattg
     1081 aactgtccat cacaacccga aacacccaac ttgacctgac gagcaaagag gactttatga
     1141 acatttgcat tgagcctgac actgtcagca aaggagattt cataatcata ggcagtaaga
     1201 aggtgagaga ccctggtctg cgagcagccg gcaccgagtg tctccacgcc agccgctgca
     1261 ctctgtctct tcctgaggga actgagggct ccttcagcat cgacagcgag gagtatgaag
     1321 ccatgcctgt ggaggtcaaa ctcctgccca gaaaacttca gttcttctgt gatccaagga
     1381 agagagagca aatgctgcag agcacatccc agtgagcctc agccttgcgg gggcgttcct
     1441 aggctgccct gcggcagcac tgcggggcgt tcccaggctg ctcttcaagc caccagtggg
     1501 accataaggg aatgtgtgtg cttctggccc agtgtcacag gatcccaaag gaattttcat
     1561 ggcaagtacc cccaacccgt ttgcttccta gagcacatac cctgtcaccc aacctgtggt
     1621 cagtactctg ttaacccctg ctttccttac gttgaggcag ttgacccctc ctacacagtg
     1681 gttgtctcag gctgcttcaa ggacattctt gccctcactg agttggaaag ggctggagtt
     1741 ttgtgattgc cccacagtgg agagtagaat ctgtagacta agctcctgtt tcagttctca
     1801 gaccgtcctg gggcctccgg ggaagcagct gctgtctctg ggtgtctctc cctctttctg
     1861 ggctctctca tgggtgctgc tcttttgtga gctctctgcc ttggttggtt ggtctcatct
     1921 ggaaagcaaa tgtgaggttg ttccctcttc agccttggca aacgtattgt aaaacgccat
     1981 ttaaaaacaa actagtgctt cctcattgtt tgtgtgcatg tgtacaactg aggctcatgt
     2041 tgaaaactaa ctgacctggg gcccaccccc caaactttgt acctcaacct ggcaggaggc
     2101 cagcgttgct cattttaaaa gactgcttcc caggtgaatc aaccataccg ggagaaagtg
     2161 ttttaaatct acttcataaa cttatatgta ttatatatat atttttaaaa atcacgtttg
     2221 tgttgacgtc tgttgtttcc atgagaggtt aaacacttat cagtgtgctt actagtgttg
     2281 tgtaaatatt gtttaagaat aaaagacttt catcattctt ttaaacagat ccaatgtaat
     2341 ttaaatgcat cccttattta taaaaattaa atagtaaacc agca
//
