LOCUS       XM_039108239            1204 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus acylglycerol kinase (Agk), transcript
            variant X3, mRNA.
ACCESSION   XM_039108239
VERSION     XM_039108239.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108239.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1204
                     /gene="Agk"
                     /gene_synonym="RGD1562046"
                     /note="acylglycerol kinase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 217
                     samples with support for all annotated introns"
                     /db_xref="GeneID:502749"
                     /db_xref="RGD:1562046"
     CDS             158..1204
                     /gene="Agk"
                     /gene_synonym="RGD1562046"
                     /codon_start=1
                     /product="acylglycerol kinase, mitochondrial isoform X2"
                     /protein_id="XP_038964167.1"
                     /db_xref="GeneID:502749"
                     /db_xref="RGD:1562046"
                     /translation="MTTFFKTLRNHWKKTTAGLCLLTWGGHWLYGKHCDNLLRRAACQ
                     EAQVFGNQLIPPNAQVKKATVFLNPAACKGKARTLFEKNAAPILHLSGMDVTVVKTDY
                     EGQAKKLLELMETTDVIIVAGGDGTLQEVVTGVLRRTDEATFSKIPIGFIPLGQTSSL
                     SHTLFAESGNKVQHVTDAALAIVKGETVPLDVLQIKGEKEQPVYAMTGLRWGSFRDAG
                     VKVSKYWYLGPLKTKAAHFFSTLQEWPQTHQASISYTGPTERPPIGPEDAAPRPSLYR
                     RILRRLASFWAQPQDAFSPEVSPEVWKDVQLSTIELSITTRNTQLDLTSKEDFMNICI
                     EPDTVSKGDFIIIG"
ORIGIN      
        1 gcccacccct aggtcacggg agagctcgcc ctgccaggct ggggctgttc cgcgtcggaa
       61 cccgagggca gcgggagcgg tttcctttaa aagagaggga gatttttgtg agagcacaca
      121 ggaaaggccg gacgctgagc ggcgggcagc ggagaagatg accacattct ttaaaacact
      181 tcgaaatcat tggaagaaaa ctacagctgg cctctgcttg ctgacatggg gaggtcactg
      241 gctctatgga aagcactgtg ataacctgct aagaagagca gcttgtcaag aagctcaggt
      301 gtttggcaac cagctcattc ctcccaatgc acaagtgaag aaagccaccg tctttctcaa
      361 tcctgcagct tgcaaaggca aagccagaac tctatttgaa aaaaatgctg ccccaatttt
      421 acacctgtct ggcatggatg tgactgtcgt caagacagat tatgagggac aagccaagaa
      481 gctcttggag ttgatggaaa cgaccgatgt gatcattgtt gctggaggag atggcaccct
      541 gcaggaggtt gttactggag tacttagaag aacagatgag gctaccttca gtaagattcc
      601 aattggattt atcccgctgg gacagaccag tagtttgagt cacaccctct ttgctgaaag
      661 tggaaacaaa gtccaacatg tcacagatgc cgcactggcc attgtgaaag gggagactgt
      721 tccacttgac gtcttgcaga tcaagggtga aaaagaacag cctgtctatg ccatgaccgg
      781 cctccggtgg ggatccttca gagatgctgg cgtcaaagtt agcaagtact ggtatcttgg
      841 tcctctaaaa accaaagcag cccacttttt cagcactctt caggagtggc ctcagaccca
      901 tcaggcctcc atctcttaca cgggccctac agagagacct cccattgggc ctgaagatgc
      961 tgctccccgg ccttctctgt acaggagaat attacgtagg cttgcctcat tctgggcaca
     1021 gccacaggat gccttctccc cagaggtgag ccctgaggtc tggaaagatg tacaactgtc
     1081 caccattgaa ctgtccatca caacccgaaa cacccaactt gacctgacga gcaaagagga
     1141 ctttatgaac atttgcattg agcctgacac tgtcagcaaa ggagatttca taatcatagg
     1201 gtaa
//
