LOCUS       XM_039106793            3893 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus AGBL carboxypeptidase 2 (Agbl2),
            transcript variant X2, mRNA.
ACCESSION   XM_039106793
VERSION     XM_039106793.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106793.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3893
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3893
                     /gene="Agbl2"
                     /note="AGBL carboxypeptidase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 8 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 6 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:366124"
                     /db_xref="RGD:1306827"
     CDS             604..3189
                     /gene="Agbl2"
                     /codon_start=1
                     /product="cytosolic carboxypeptidase 2 isoform X2"
                     /protein_id="XP_038962721.1"
                     /db_xref="GeneID:366124"
                     /db_xref="RGD:1306827"
                     /translation="MFPALETELKQETLPDPYEDFMHHHLQYYGYFKAQKSSLPSSAT
                     HQRVWRSSPRYMLNGSFGERDDFISDSLEKEMFLWPNCLTSTGHAQIDAVNKDSLMLS
                     SPLLRSRQLLYDELDTVNPRLREPRELFSCFSNKGPLQAPRWPIECEVIKENIHHIEW
                     VPLQPEYFYQPTGNERVPEIVGEEQGTVVYQLDSVPTEGSFFTSSRIGGKQGVIKELA
                     ATLQGPEDNTLLFESRFESGNLQKAVRVGIYEYELTLRTDLYTDKHTQWFYFRVQNTR
                     KDVTYRFTIVNLLKPKSLYAVGMKPLMYSQLDATIYNIGWRREGHEIKYYKNNMDDGP
                     QPLYCLTWTIQFPHDQDTCFFAHFYPYTYTDLQCYLLSVANNPIQSQFCKLRALCRSL
                     AGNTVYLLTITNPSRTPQEAAAKKAVVLSARVHPGESNSSWIMNGFLDFILSDSPDAQ
                     LLRDIFVFKVIPMLNPDGVIVGNYRCSLAGRDLNRHYKTVLKDSFPCIWYTKNMIKRL
                     LEEREVLLYCDFHGHSRKNNIFLYGCHSNNRKHWLHERVFPLMLSKNAPDKFSFDSCN
                     FKVQKCKEGTGRVVMWRMGIINSYTMESTFGGSTLGSKRDTHFTIEDLKSLGYHVCDT
                     ILDFCDPDQTKYTQCLQELKELLQQEIHKKLNNFGQDMDLEGNWSDIPLSDIESSTSG
                     SDSSLSDGPPIRLLSIADELHQKMVLKNPKKKRLQTRKQRNEQYQKNYLMRELKLTEN
                     APGRARFASTLQKQPTFLKSPENSSPSIRRSEKPRLNETQLSGREKGTSLDAPLTSPK
                     TKEITQSKKPGFTASCSPKRSTNSSLGPAPDAKPNWPRTRYPASRKDHAAMAGCPSLH
                     VYTYP"
ORIGIN      
        1 cgagggactg ggcctgcgaa ggagcgctct agctggctgg ggacaagcag gggatcccag
       61 gccggaaggg agtgaggagg gcagtggggc gaggagcttt gggcagacag gactcccggg
      121 ctggcctctg cagaaggagt gagaatgaag gtgtagtggg ggagctcctg ccgcgtcctc
      181 ccgacctgcg gaccagctgg ggagtaaaga gaacctaggg agcacggtgt caccccgagg
      241 gctccggtgg aaacgtctgc tccgcccttg cttgagcttt ctcctcttgg cggtccacac
      301 tccgaggcag ggcactcaga actgaacgtt tccagggctt ttgcttccga cccctgacct
      361 ttccttttca actgctctga agcgactctg cgcgtgcccc caacccggtt cctttctctt
      421 ttctgtggcg tcctggtgtt gggcatctgt tctcagcgta agctaagcat ggggccagcg
      481 aggctcctgg tgagtctagt ggaccaggcg tgggcacacg cagagcgccg ccgctcctca
      541 ggcagatatt gcagctgggt tcggagctac tgacttgcct acatcacact atgcggcagt
      601 aacatgttcc cggcgttgga aacagagcta aagcaggaga ctcttcctga tccctatgag
      661 gattttatgc accatcacct gcagtattat ggatatttca aagctcagaa aagcagctta
      721 ccaagttcag ccacccatca gcgtgtttgg aggagcagcc ctcggtatat gttaaatggc
      781 tcttttggag aaagagatga tttcatctcg gacagcttgg aaaaagagat gtttctatgg
      841 cctaactgtt taacttcaac tgggcatgct cagatagatg ctgtaaacaa agactcactt
      901 atgctgagct caccactcct taggagcagg cagcttcttt acgatgagct ggatacggta
      961 aacccacgcc ttcgagaacc ccgagagctc ttctcatgct tctctaacaa agggccgctg
     1021 caggctccaa gatggccgat agaatgtgag gtcatcaagg aaaacattca tcacattgag
     1081 tgggttccac ttcaaccaga gtatttctac caacctacag gaaacgaaag ggtaccagag
     1141 attgtgggag aagagcaagg tacagttgtg taccagctgg attcagtgcc tacagagggt
     1201 tccttcttca ccagttccag aataggaggc aaacaaggag tcatcaagga gcttgccgcc
     1261 acactgcaag gcccggaaga caacactcta ttgttcgagt caaggtttga gagtgggaac
     1321 ctgcagaaag ccgtcagagt aggcatttat gagtacgaac tcaccttgcg aaccgacctc
     1381 tacactgaca agcacacgca gtggttttac ttcagagttc agaacaccag aaaagatgtt
     1441 acctatcgct tcacgatcgt caacttgctg aaacccaaga gcctttacgc tgtagggatg
     1501 aagcctctca tgtactctca gttggacgcc accatctaca acattggctg gaggagagag
     1561 ggccatgaaa tcaagtacta taagaacaac atggatgacg ggccacagcc cttatactgt
     1621 ctcacctgga ccattcagtt tcctcacgac caggacactt gcttctttgc acacttttac
     1681 ccatacacgt acactgactt gcaatgctat ctcttgtcag tagcaaacaa ccccatccag
     1741 tctcagttct gcaagctccg agctttatgc agaagcttag cagggaatac tgtttatctg
     1801 cttaccatta ccaacccatc caggacccct caagaggcag ctgcaaagaa agcggtggtg
     1861 ttgagtgcca gagtccaccc cggagaaagt aacagctcct ggatcatgaa cggctttttg
     1921 gacttcatcc tcagcgactc tccagatgcc cagctcctca gggatatctt tgtcttcaag
     1981 gtgatcccca tgttaaatcc agacggcgtg atagtgggga attatcggtg ttcgctggcc
     2041 ggaagggact tgaacaggca ttataaaact gttcttaagg attccttccc ctgcatttgg
     2101 tacaccaaga acatgatcaa aagacttctg gaagaaagag aggtcctctt gtattgtgat
     2161 tttcatgggc acagccgcaa gaacaacatc ttcctgtatg gctgtcatag caacaaccgc
     2221 aagcactggc ttcacgagcg ggtctttcct ttaatgttga gcaagaatgc gccagacaag
     2281 ttctctttcg acagctgtaa ctttaaggtc caaaaatgca aagaaggaac aggaagagtc
     2341 gtgatgtggc ggatgggcat catcaacagc tacaccatgg agtccacctt tggcgggtcc
     2401 accctgggta gtaaaagaga tactcacttt accattgagg acttgaagtc cctaggttat
     2461 catgtctgtg acactattct ggatttctgt gatcctgacc aaaccaagta cactcagtgt
     2521 ctacaagagc ttaaggaact cttacaacag gaaatccaca aaaagttgaa taactttgga
     2581 caagatatgg atttagaagg aaactggagt gacattcctt tgtctgacat tgaatccagc
     2641 acgagcggct cggacagctc cctctccgat ggtcctccca ttcgtcttct gagcatagcg
     2701 gatgagctgc atcagaagat ggtgttaaag aatccaaaaa agaagagact tcagactaga
     2761 aaacagcgga atgagcagta ccagaagaat tacttgatgc gggagttaaa gttaacagaa
     2821 aatgccccag gaagggcaag atttgcttct actctgcaaa agcagcccac ttttttgaaa
     2881 agtccagaga attctagccc ttcaataagg agaagtgaaa agccgaggct caatgagaca
     2941 cagttaagtg gaagagagaa aggcacctcc ttggatgcac cactgaccag ccctaagact
     3001 aaagaaataa ctcagagtaa gaagccaggc tttacagcat catgctctcc aaagagaagc
     3061 acaaactcca gcctagggcc agctccagat gcgaagccaa actggcctag gactagatac
     3121 cctgcctcga ggaaggacca tgctgccatg gcggggtgcc cgtccttgca tgtatacaca
     3181 tacccatagg cgtgcttgtg ctgtggcaca caggggcttc ctctgacgat tttgggtagt
     3241 ttcgttgttt tgttttgtat gaaatgctgg ggaacaaaca tggggcactg agcgtactag
     3301 gcaagtgctt taccattgaa ctgtgtctct agctcttttg aaaaggttgt gggtcataca
     3361 cattttataa gggggaaatc tacaaatgaa gcggaaactc tatttatggt gtactgtgtt
     3421 tcacactcac cacccacgga cctgcactct ggacttccac tgggcactct ccttagatac
     3481 gtgtcttgtt accttgtgaa tttggtagtt ttttccttag atgagattat attttgatgt
     3541 atagaaaagc ctttattgaa agctgaagcc tgtactcata aaaagacaga acactatata
     3601 tatacctcat tttaaccaat agatgttctc tctaaaagtt agatgcaaat cagtttttaa
     3661 aagattaagc tgttttaaat gtgttttggg aatgtgccat atgaaaaagt cttgtgtgga
     3721 agtttccaaa tggtgactga ccagtcagac tgtggttata tcaggcttgc tcaaagtaag
     3781 gcattcctct acagaaaaaa ttacatgtgt ttcttaaaat ttaatgttgt ttatattatg
     3841 ttcaacaagg ttgtgtaaat ttttaactca gtgattaaaa ttctttctct cga
//
