LOCUS       XM_008759580            3817 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus AGBL carboxypeptidase 1 (Agbl1),
            transcript variant X1, mRNA.
ACCESSION   XM_008759580
VERSION     XM_008759580.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008759580.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008759580.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3817
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3817
                     /gene="Agbl1"
                     /note="AGBL carboxypeptidase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 11 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 4 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:308724"
                     /db_xref="RGD:1560280"
     CDS             339..3716
                     /gene="Agbl1"
                     /codon_start=1
                     /product="cytosolic carboxypeptidase 4 isoform X1"
                     /protein_id="XP_008757802.2"
                     /db_xref="GeneID:308724"
                     /db_xref="RGD:1560280"
                     /translation="MAEQEGSGLQVLLHTLQNSSDKASILAILQVLSDLLSVGTDRRI
                     YYIISKGGSEALLQTLVDTARSASPDWDILLPLFRLLAKVGLRDKKFGQKALELEALD
                     VTLILARKNLSHSQNLLHCLWALRVFASRVTMGAMLGINGAMELLFKVISPYTRKHTR
                     TIRAATEVLAVLLKSKSNSRRAVNRGYVNSLLRLHQDWHSRDVTNTYVMIRHGLLLCL
                     RHIVALRSGREAFLAAQGMETLFSIAQTCLENKNMELVISAVIQILRQCYPVSRLPLA
                     TASSAYTFPAPGSTSLELVRHLTEEDFDDDGDEEMDKDSDVEAGKEDDDLETDMSKLS
                     SKPGLDLPEEELAQYDARCPELSCSFEELEPKCGDNLNFRDTLHANHHHIPSAASLRQ
                     HCCNREHRSWRQEGEDTVHTSILHMAKPGKSSVRSSSKQRSATNVNQSIQQNGLGIGS
                     SGRGTLDIQTPLEQAAWDIEAISCPRITASFSNSTKPEESHEAAEKLLHKHPKHIPFH
                     DPHLYMANVMRTRSAVGFKTMAFPDFWGHCPPPTAQPLLDRKLGVQRIKILEDVRRLL
                     QPSDVINKVVFSLDEPWPLQGSISDCLRFHSKFESGNLRKAIQVREFEYDLLVNADVN
                     SSQHQQWFYFKVSGMRAAVPYRFNIINCEKPNSQFNYGMQPTLYSVKEALLGRHAWIR
                     TGSEICYYKNHYRQNAAAMDGASGKRYYTLTFAVTFPHNEDACYLAYHYPYTYSTLMT
                     HLEILERSIDRREVYFRHDVLCQTLGGNPCPLVTITAFPESNSAEHLEQFRCRPYQVI
                     TARVHPGESNASWVMKGTLEFLVSSDPVAKLLRENFVFKIIPMLNPDGVINGNHRCSL
                     RGEDLNRQWLCPQVHLQPTIYHAKGLLQYLSSTGRGPVVFCDFHGHSQKKNVFLYGCS
                     MKETLWQAGCTVGGSALLEDVSYRTLPKILDKLAPAFTMNSCSFLVEKSRASTARVVA
                     WREMGVSRSYTMESSYCGCNQGPYQGLQFGTRELEEMGAMYCLGLLILELKSASCSHK
                     LLARASTLLNADVLEHYLQRCSSSSSSNSSNNNSRTSEVNDEPPCMEEIDYCADSSSD
                     SEQNFTELDQQIQECAFNKDEEEEKEEGTGRRRRSVP"
ORIGIN      
        1 cttgtcaacc atccagggtg gcttttcctc tagtctcctg tatgggtctg gaggtgggtg
       61 agtgactcat gagggtgccc tccccacccc tacatccaaa tgcttagccc ttcccagagc
      121 cagggctcac ctaatcccca cagtgggagt cagggggtat ccactcctgt gttgaaggct
      181 aaggttgcag agtggtaact tcacactctg cagcatgtgt agctgaggcc tctgcagagc
      241 agtctcctgc aaggcaggca gcgaggtcat cttggcaggc gtcatctctc tagtcaggat
      301 ccagcctcag gcagtggtgc cccgggacct gagcagagat ggctgaacaa gaaggcagtg
      361 gcctgcaggt gctgctgcac acgcttcaga actcctccga taaagcatcc atcctggcca
      421 tcctccaggt cctcagcgat ctgctctctg ttggcacaga ccggaggatt tattatataa
      481 tcagcaaagg tggcagcgaa gcccttctgc agactctggt ggacacagca aggtcagctt
      541 ctcctgactg ggacatcctc ctgcctctct tcaggctgct ggctaaagtt ggcctaagag
      601 ataagaagtt tggacagaag gcactagaat tagaagcact tgatgtgacc ttgattctgg
      661 ccaggaaaaa cctatctcat agccagaacc tcctgcactg tctctgggca ttgcgtgttt
      721 ttgcctccag agtaaccatg ggagccatgc tgggaattaa tggagcgatg gaactgctct
      781 tcaaggtcat ttctccttat acccgaaagc acacccggac aatcagggca gccacggaag
      841 ttttggcagt gttgctgaaa tccaagtcta acagccgcag ggcagtgaac agaggctatg
      901 tcaacagctt gctcaggctg catcaggact ggcacagccg cgatgtgacc aacacctatg
      961 tgatgatccg ccatgggctt ctgctctgcc tcagacacat tgtcgccctc cggtctggca
     1021 gggaggcctt cctggcagcc caaggcatgg agactctctt cagcattgca cagacttgcc
     1081 tggagaacaa gaacatggag cttgtgatct ctgctgtgat tcagatcctc aggcagtgtt
     1141 accctgtgag tcgccttccc ctggccacag ccagcagtgc ctacaccttc cctgcccctg
     1201 ggagcaccag cttggagctt gtacgccatc taactgaaga ggattttgac gatgatggtg
     1261 atgaagagat ggacaaagac tcagatgtgg aagctgggaa agaagatgat gacttggaaa
     1321 ctgatatgag caagctgagt tctaagcctg gtcttgactt acctgaggag gaacttgcac
     1381 agtatgatgc gaggtgtcct gagctctcct gtagctttga ggaactagaa cccaaatgtg
     1441 gagataattt gaacttcaga gacactctgc atgccaatca ccaccacatt ccaagtgctg
     1501 cctctctaag acaacactgt tgcaacagag agcatcgctc ctggagacaa gaaggagaag
     1561 acacagtcca cacttccatt ctgcacatgg cgaagccagg gaagtccagc gtacggtcat
     1621 cctcaaaaca aagatctgca acaaatgtga accaaagcat acaacaaaat ggtttgggga
     1681 tcggttcttc tggacgtggt accctggaca ttcagactcc cttagaacag gctgcttggg
     1741 acatagaagc aatttcttgc ccaaggataa ctgcctcatt ttccaactct accaagccag
     1801 aagaaagcca tgaagcagca gagaagcttc tccacaaaca tcccaagcac atacctttcc
     1861 atgatcctca tctttatatg gccaatgtga tgcgaacaag atctgctgtg ggattcaaga
     1921 cgatggcatt tcctgatttc tgggggcact gtccccctcc cactgctcaa cccctgttgg
     1981 atcgcaaatt gggagttcag aggatcaaga tacttgagga tgtccggagg ctcctccagc
     2041 caagtgatgt tataaacaag gttgtcttca gtttagatga gccctggcct ttgcaaggca
     2101 gcatttccga ttgcttaagg ttccactcca agtttgaatc aggcaatctt cgtaaagcca
     2161 tccaagtgcg tgagtttgag tatgacttgt tggtcaatgc tgatgtgaat agctcccagc
     2221 atcagcagtg gttctacttc aaggtgagcg gcatgagggc cgcggtccct tatcgcttca
     2281 acatcatcaa ttgtgagaaa cccaacagcc agttcaacta tgggatgcag ccgaccctgt
     2341 attctgtgaa agaggctctt cttggccgac atgcctggat acggacaggc tctgaaattt
     2401 gttactacaa aaatcactac cgtcagaatg cagccgccat ggatggagca tccgggaagc
     2461 gctattacac cctcaccttt gctgtcacct tcccacacaa tgaggatgcc tgctatctgg
     2521 cctatcacta tccctatacc tactccaccc tcatgactca tcttgaaatt ctggaaagaa
     2581 gcatcgatcg cagggaagtc tacttccggc atgatgttct ctgccaaacg ctgggaggga
     2641 atccatgtcc attggtgacg atcactgcct ttcctgaatc taacagtgcc gagcatctgg
     2701 aacagttccg ctgtcgtcca tatcaggtga tcacagcacg agttcaccca ggagagagca
     2761 atgccagttg ggtgatgaag ggaaccttgg agttcctagt cagcagtgac cctgtagcaa
     2821 agctcctgag ggaaaacttc gtgttcaaga tcatccctat gctcaaccca gatggtgtca
     2881 tcaatggcaa tcacagatgc tcattgagag gcgaggatct caacagacag tggctctgtc
     2941 cccaagttca tctccaacca accatctacc atgccaaagg tcttctccaa tacctaagca
     3001 gtactggccg ggggcctgtg gtcttctgtg acttccatgg tcactcccaa aagaagaatg
     3061 tattccttta tggttgcagc atgaaagaaa ctttgtggca agcaggctgc actgtgggtg
     3121 gatctgccct cttggaggat gtcagctaca ggacacttcc taaaatcctg gacaaactag
     3181 caccggcatt caccatgaac agctgcagct ttctggtgga aaagtcacga gcttccactg
     3241 ctcgggtagt ggcgtggagg gagatggggg tttccagaag ctacaccatg gagagcagct
     3301 actgcggctg caaccagggc ccctatcagg gtctacagtt cggtactaga gaactggaag
     3361 aaatgggagc catgtactgc ttgggtctgc tcatcttgga actcaaatct gcaagctgta
     3421 gccataagct cttggctcga gcgtcaaccc tgctgaacgc agatgttctg gaacactacc
     3481 tccagcggtg cagtagtagc agcagcagca acagcagcaa caacaacagt agaacctctg
     3541 aagtaaatga cgagccacct tgcatggagg aaatcgacta ctgtgcagac agcagctcag
     3601 actcagagca gaacttcact gagctggacc agcagatcca agaatgtgcc tttaacaagg
     3661 atgaagaaga ggagaaggag gaagggacag ggcggaggag aagatctgtc ccctagtctt
     3721 gaagttcagt gctatctctg ggtctctagc cattggacta gctataacat ggctttttcc
     3781 tcattaaata tatagcacct aagccagtag aaaacca
//
