LOCUS       NM_001414912            3102 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus adhesion G protein-coupled receptor F3 (Adgrf3),
            transcript variant 1, mRNA.
ACCESSION   NM_001414912 XM_006239800
VERSION     NM_001414912.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3102)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Dec 14, 2022 this sequence version replaced XM_006239800.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, expression,
                                         longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-106               JAXUCZ010000006.1  31853018-31853123
            107-167             JAXUCZ010000006.1  31854372-31854432
            168-308             JAXUCZ010000006.1  31854792-31854932
            309-485             JAXUCZ010000006.1  31855314-31855490
            486-704             JAXUCZ010000006.1  31855963-31856181
            705-914             JAXUCZ010000006.1  31857817-31858026
            915-1058            JAXUCZ010000006.1  31858695-31858838
            1059-1255           JAXUCZ010000006.1  31858990-31859186
            1256-1435           JAXUCZ010000006.1  31859735-31859914
            1436-2809           JAXUCZ010000006.1  31860725-31862098
            2810-2851           JAXUCZ010000006.1  31862516-31862557
            2852-2914           JAXUCZ010000006.1  31862639-31862701
            2915-2970           JAXUCZ010000006.1  31863080-31863135
            2971-3102           JAXUCZ010000006.1  31864310-31864441
FEATURES             Location/Qualifiers
     source          1..3102
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q14"
     gene            1..3102
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /note="adhesion G protein-coupled receptor F3"
                     /db_xref="GeneID:298857"
                     /db_xref="RGD:1305868"
     exon            1..106
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     CDS             17..2995
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; probable G-protein coupled receptor 113; G
                     protein-coupled receptor 113"
                     /codon_start=1
                     /product="adhesion G-protein coupled receptor F3 isoform 1
                     precursor"
                     /protein_id="NP_001401841.1"
                     /db_xref="GeneID:298857"
                     /db_xref="RGD:1305868"
                     /translation="MSSLALSQLLLAMTLTLLELESTFVPTAQSELSLSGGKSVQQLN
                     QFSRVGESVLVTSYVHLEFSNRALPPKLSENFTLPTVLAFFSSRMITALVLTTECHVD
                     HSGTSFCTCHPDYQWNTTLCSLYPNCCGHRSERDSCECLSFHGPVPGYCQLLPPVPAN
                     LTLDSQLQMHRNTLNLILLKKEKATNLRWYLRQSENHRPILLWPGTNVFQTSNESQAG
                     LQIAHMSRHWTGEYESIFEAQGFRRRLRQVVKMPLEEKDVVRLPEELSISCAASTGFQ
                     LRCCIPLTNMAYTATWSPGEDSQASLQNMPDSQCFVLAVRHCPAANTTYTCTLQSQSL
                     APLVAPVSITIIQDGDTTCPEDFSVVAWNVTKAGFMAQAPCPMNKTGVVKRLCGSNGI
                     WGPVQDSCTEAKILDLYSKAKLLLEGQGKPNEQVPRILRELQRQVGVVSTPSDLREML
                     HTVTLLAKVVAETSTELTDRALKDLLTTTDKILDVNISSLWTLARAQEPSMGSDFLKA
                     VETLVHSVSPQQHPFSFSSSNVLLQSQLLRHSSPLGYQMPSAPPLLQARIPWHSLAPL
                     VLNGTNVRITSLALQKLDSRLPSNYRQGLRDTSYATPGMILVISITADGQDFTQAEVI
                     MDFEDMNGTLHCVFWDHNAFQGRGGWSDEGCELQAANASAVQCVCRHLTAFSILMSQH
                     AVPEDPLLDLLSQVGVGASILALLVCLVIYRLVWRVVVRNKVAFFRHTALFNMVICLL
                     VADTCFLGNPWLPSGYHSLVCLATAFLCHFFYLATFFWMLAQALVLAHQLLFVFHQLS
                     KPLVLSMMSILGYLCPLGFAGVTLGLYLPQRKYLREGKCLLSGDGVSLHAFSEPVLAI
                     VSVNGLVLVIAVLKLLRPSLSEGPAVEKRQALVGVLKALLILTPIFGLTWGLGVTTLF
                     EGSLVFHYIFVILNSLQGVFIFVFGCLTDKKVLEALRKWLRGSRSSNSAISMVTNESC
                     TSEHSRERSELASYEEQMAD"
     exon            107..167
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     exon            168..308
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     exon            309..485
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     exon            486..704
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     exon            705..914
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     exon            915..1058
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     exon            1059..1255
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     exon            1256..1435
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     exon            1436..2809
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     exon            2810..2851
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     exon            2852..2914
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     exon            2915..2970
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
     exon            2971..3102
                     /gene="Adgrf3"
                     /gene_synonym="Gpr113"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actgctgcgt caagccatgt cctctctagc tctctcccag ctgctcctgg ccatgaccct
       61 taccctgctg gagttggagt caacatttgt ccccacagcc cagtcggagc tcagtctgtc
      121 tggagggaaa tctgtgcagc aactgaacca gttcagtcga gtaggggaat cagtgctggt
      181 caccagctat gtccatctgg aattttccaa cagagccttg ccgccaaagc tctctgagaa
      241 cttcacactt cctactgtct tggcattctt ttcctccaga atgatcactg cccttgtcct
      301 cacaacagag tgtcatgtcg accacagcgg gactagcttc tgcacttgcc accctgacta
      361 ccaatggaac accacacttt gctcccttta ccccaactgc tgtggccaca ggtcagagag
      421 agattcctgt gaatgtctca gcttccacgg tccagttcct ggctattgtc agttgctgcc
      481 acctgttcct gcgaacctga cactggactc acagctacaa atgcatagga acaccctgaa
      541 cctcattctc ctcaagaaag agaaggctac aaacctgaga tggtacttga gacagtcaga
      601 gaaccacaga cccatcttac tatggccagg gaccaatgtg ttccagacgt ccaatgagag
      661 ccaggctggt cttcaaatcg cccacatgtc ccgtcactgg acaggtgagt atgaaagcat
      721 cttcgaggcc cagggattca ggcggaggct gcggcaggtg gtgaagatgc ccttggagga
      781 gaaagacgtg gttcgcctcc cagaggagct gtccatctcc tgtgctgcct ccactggctt
      841 ccagctgagg tgctgcatcc cgcttaccaa catggcctac actgctacct ggagtcctgg
      901 ggaggacagc caagcctcct tgcaaaacat gccggattcc cagtgctttg tgcttgccgt
      961 acgacactgc ccagcagcca ataccacata tacctgcacc cttcagagtc agagcctggc
     1021 tcccctcgtg gctcctgtct ccatcacgat catccaggat ggagacacta cctgccctga
     1081 ggacttctcg gtggttgcct ggaatgtcac caaggctggc ttcatggcac aggccccatg
     1141 tcctatgaat aagacgggtg tggtaaagag actctgtgga tccaatggca tctggggacc
     1201 agtccaggac agctgcacag aagcaaaaat cctagacctg tattctaaag ccaagctgct
     1261 gctggaaggc caggggaagc ctaatgagca ggtgccacgg atcttgaggg agctgcaaag
     1321 gcaggtgggg gtggtcagca ccccgtctga cctacgggaa atgctgcaca ctgtgacctt
     1381 acttgccaag gtagtagccg agacaagcac ggagcttaca gacagagctc tgaaggacct
     1441 cctgactacc acagacaaga ttctagatgt gaacatcagc tctctgtgga ctctggctcg
     1501 ggcccaggag ccctctatgg gctcagattt cctgaaggct gtggagacct tggtccacag
     1561 tgtgagccca caacagcatc ctttttcctt cagttcatct aatgtgttac tgcagagcca
     1621 gctcctcaga cactcctctc ctcttggcta ccaaatgccc tccgccccgc ccctcctgca
     1681 ggcacggatt ccatggcatt cactggcccc attggtcctt aatggaacta acgtcagaat
     1741 tactagccta gcactgcaaa agctggactc ccggctgccc tccaactata gacaagggct
     1801 gcgggacacc tcatacgcca ctccagggat gattcttgtg atctccatca cagcagatgg
     1861 ccaggacttc acgcaggcag aggttatcat ggactttgaa gacatgaacg gaaccctgca
     1921 ctgtgtcttc tgggaccaca atgccttcca gggccgggga ggttggtcag atgaagggtg
     1981 tgagctacag gcagccaatg caagcgccgt tcagtgcgtc tgccggcacc tcacagcctt
     2041 ttctatcctc atgtcccaac acgctgtccc agaagacccc ctcctggacc tgctgagcca
     2101 ggtgggtgtc ggggcctcca tcctggctct gctcgtctgc ctggttattt accggctggt
     2161 gtggagagtg gtggtccgga acaaagttgc cttcttccga cacaccgccc tgttcaacat
     2221 ggtgatctgc ttgctggtcg cagacacatg tttcctgggg aacccatggc ttccgtcagg
     2281 gtaccacagc ctggtctgcc tggccactgc tttcctgtgt cacttcttct acctggccac
     2341 ctttttctgg atgctggcac aggccctggt gctggcccac cagctgcttt ttgtcttcca
     2401 ccagctgtcc aagcccttgg ttctctcgat gatgtcgatc ctgggctacc tgtgcccact
     2461 ggggtttgca ggtgtcaccc tgggcctcta cttgcctcaa aggaaatacc tgcgggaggg
     2521 gaaatgcttg ctgagcggag atggcgtctc gctgcacgcc ttcagcgagc cggtgctggc
     2581 catcgttagt gtcaacgggc tggtccttgt cattgctgtg ctgaagctgc tgagaccttc
     2641 gctgtcagag gggcctgcag tggagaagcg ccaagctctt gtgggagtgc ttaaagccct
     2701 gcttatcctc acgcccatct ttggcctgac ttggggactg ggcgtgacca ctctgtttga
     2761 aggctccttg gtctttcact acatctttgt cattctcaac agcctccagg gtgtcttcat
     2821 ctttgtgttt ggctgcctca cagacaagaa ggtactagag gccttgcgca aatggttgcg
     2881 aggcagccgg tcctctaact ctgccatctc catggtcaca aacgaaagct gcacctcaga
     2941 acacagcaga gaaagaagtg agcttgccag ttatgaagaa cagatggctg attgacagga
     3001 acctgcgatc ttccagacag tgaagtcgaa gggcagaatt ctctctcttt gggggcagta
     3061 tttagttaca aagttcttac tactataaac tgcttctaaa at
//
