LOCUS       XM_039084502            2898 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus adhesion G protein-coupled receptor F1
            (Adgrf1), transcript variant X1, mRNA.
ACCESSION   XM_039084502
VERSION     XM_039084502.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084502.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2898
                     /gene="Adgrf1"
                     /note="adhesion G protein-coupled receptor F1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:301266"
                     /db_xref="RGD:1310285"
     CDS             129..2876
                     /gene="Adgrf1"
                     /codon_start=1
                     /product="adhesion G-protein coupled receptor F1 isoform
                     X1"
                     /protein_id="XP_038940430.1"
                     /db_xref="GeneID:301266"
                     /db_xref="RGD:1310285"
                     /translation="MVCGSQSPTIVIFFLFIYLFIYLFIYLFKQKNGGHRTKGDVSVV
                     EKRHRVQEYEALLQMTYRDAEEKRELKRFLKLLNSQPPSFHGPSKIVRVKATTYCRSQ
                     KEFLECACEDSYSWFPPSCLDPRNCYLHTTGPLPSCSCPLKGLRQSVNFCERAKVWGT
                     FEIDEKFPEDLWDSSSHVYAHYTTGIENQLKEAFRRVHGFESVQVTQFRNGSIIVGYE
                     VTGSTSPAELLSVIEQESEKAQVALRRQFPVKYGSFRVFGKAQCNSISFGFGLENDEY
                     TLPCSSGFTGSVTVKCQASGWQLTRESCVLPQLEELKKELSVIADEITEAGVASLVHN
                     LSAIILQSPSTTVGNLGSVVSLLRNVSSLSLANSLAVSNSTLKDVINIADHILDSASI
                     KNWTILIQEAKDSSSQLLETLENISTLIPSTALPLSISRKFIDWKGIPVTQVQSTQGY
                     NYQIEMIQQNASLPIRGHVLIEPDQFRKSHPKTIISMASLTFGDILPITQRGNAQANG
                     PVISTLIQNHSISEIFLNFSKIKGNLSQPHCVFWDFSYLQWSNAGCQLVNETPDTVLC
                     RCSHLTSFSMLMSPFVPSSAVPVVKWITYIGLGVSIASLILCLIIESLFWKQTKRSQT
                     SYTRNICLVNIALSLLIADVWFIIAATVDTSASLSGVCVAAVFFTHFFYLAVFFWMLV
                     LGILMAYRIILVFHHTALLTMMAIGFCLGYGCPLLISVITLAVTQPSNNYKRNNVCWL
                     NWSDKSKPLLAFVVPALTIVAVNLVVVLLVLRKLWRPAIGERLNQDDKAIAIRVGKSL
                     LVLTPLLGLTWGFGIGTMADSQNLAWHVLFALLNAFQGFFIFCFGILLDNKMRQLLSN
                     KLTSLSSWKQTSKQNSSDIVTKPKCLRPFNILQHRGMYALSHTRDSSTDITLTQFLST
                     E"
ORIGIN      
        1 cctgtgaagc tttttccttc acttgttccc aacagcctcc ccaggtcctt tctcggtcat
       61 ctcccaccat ccttggcttg gatattaagt cagcggtttc aggtcacctg ggaaactcaa
      121 caagccttat ggtttgcgga tctcaaagcc ccaccatagt tatcttcttc ttgtttattt
      181 atttattcat ttatttgttt atttatttat ttaagcagaa aaatggtggc cacagaacaa
      241 aaggagatgt cagtgtggtc gagaaaaggc atcgagtcca ggagtatgag gcactacttc
      301 agatgacgta cagagatgca gaagagaaga gagaactgaa gagatttctg aagctcttga
      361 attctcaacc accgagcttc catggtccca gcaagatcgt cagagtgaag gccaccacgt
      421 actgcagaag ccaaaaggag ttcctggagt gtgcctgtga agacagttat tcatggtttc
      481 ctccctcctg ccttgacccc aggaactgct accttcacac aactggaccc ctcccaagct
      541 gtagttgtcc cctcaaaggc ctcaggcaga gcgttaattt ctgtgagaga gcaaaggttt
      601 ggggaacttt tgaaattgat gaaaaatttc ccgaagacct ctgggattca tcgtctcatg
      661 tatatgccca ctacacaact ggaattgaaa atcaacttaa agaagcattc aggagagtcc
      721 acggttttga gtcagttcag gtcacccaat ttcgaaatgg aagcatcatt gttggctatg
      781 aagtgaccgg ctccactagt cctgctgaac tcctctctgt cattgaacag gagtctgaaa
      841 aggcacaggt ggccctgaga aggcagtttc cagtcaaata tggctctttt cgagtgttcg
      901 ggaaagctca gtgtaacagc atctcctttg gattcgggct tgagaatgac gaatatactc
      961 taccctgcag cagtggcttc actggaagcg tgacagtcaa gtgccaggcc tctgggtggc
     1021 agctcaccag ggagtcctgt gtactccctc agctggaaga actgaagaag gagctcagtg
     1081 tgattgcaga cgagatcacg gaggcaggtg tggcgtcttt ggtgcataat ctttctgcca
     1141 tcattctgca aagcccatcc accacagttg ggaacctagg ctcagtggtg tcacttctga
     1201 ggaacgtttc atccctgtca ctggcaaact ctttagctgt atccaattcg acactgaagg
     1261 atgtcatcaa catagctgat catatcttgg attcagcctc cataaagaac tggacaattt
     1321 tgatacaaga agcaaaggac tccagctccc agttgctaga gacgttggaa aacatcagca
     1381 ctctcatccc ttccactgct ttgcctctta gtatttctcg aaaattcatt gactggaaag
     1441 ggattccagt gacccaagtc caaagcacac agggctacaa ctatcagatc gaaatgatac
     1501 aacaaaatgc ctctctgccc atccgaggcc atgtgcttat tgaaccagat caatttcgga
     1561 aatcgcatcc aaagactatt atcagcatgg cctcattgac ctttggggac attctaccca
     1621 ttactcagag aggaaatgca caggccaatg gtcctgtgat atccacactt atccaaaacc
     1681 attccatcag tgaaattttc ctgaactttt ccaaaataaa gggaaacctg agccagcctc
     1741 actgtgtgtt ttgggatttt agctacttgc aatggagcaa tgcaggctgc caactagtta
     1801 atgaaactcc agacacagta ctgtgccgat gtagtcacct gacctccttc tccatgctca
     1861 tgtcaccctt tgttccctct tcagctgtcc ctgtggtaaa atggatcaca tacatagggc
     1921 tgggcgtctc cattgcaagc ctaatcttat gcctgatcat cgagtctctg ttttggaagc
     1981 agaccaaaag aagccaaacc tcctacacac gcaacatttg cctggtgaac attgccttgt
     2041 cactcctaat tgctgatgtt tggtttatca ttgctgccac ggtggacacc tccgcaagcc
     2101 tgtctggagt ctgtgtggct gcggtgttct tcactcactt tttctacctt gccgtattct
     2161 tctggatgct tgtactcggc atcctgatgg cttatcggat catcctcgtg tttcatcaca
     2221 cggccttgct taccatgatg gctattggct tctgcctagg ctatgggtgc cctctcctta
     2281 tatccgtcat cacccttgct gtcacccaac ctagcaataa ctacaaaagg aacaatgtgt
     2341 gctggcttaa ttggtctgac aagagcaaac ctctcttggc attcgttgtt cctgcattga
     2401 ctattgtggc tgtgaacttg gttgtggtgc tactggtcct caggaagctt tggaggccag
     2461 cgattggaga aagactcaat caggatgaca aggccattgc catccgcgtg ggaaagagcc
     2521 ttctcgtgct gaccccactg ctagggctca cctggggctt tggcatagga acaatggcag
     2581 acagtcagaa tctagcctgg catgttcttt ttgctttact taatgctttc cagggatttt
     2641 tcatcttctg ttttggaatt ctcttggata acaagatgcg gcaacttctg tccaacaagt
     2701 tgacttcatt aagttcatgg aagcaaacat caaagcaaaa ctcttcagat attgttacca
     2761 agccgaaatg cttaaggcct ttcaacatac tacagcacag aggcatgtat gcgctttctc
     2821 atactagaga ttcgtccact gacatcacat taacccagtt tttatcaacc gaataaagcc
     2881 acgagtcatc atcaaggg
//
