LOCUS       XM_039092758            4413 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus adhesion G protein-coupled receptor A3
            (Adgra3), transcript variant X1, mRNA.
ACCESSION   XM_039092758
VERSION     XM_039092758.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092758.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4413
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4413
                     /gene="Adgra3"
                     /note="adhesion G protein-coupled receptor A3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 ESTs, 1 long SRA read, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 109 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:305408"
                     /db_xref="RGD:1304914"
     CDS             249..4172
                     /gene="Adgra3"
                     /codon_start=1
                     /product="adhesion G protein-coupled receptor A3 isoform
                     X1"
                     /protein_id="XP_038948686.1"
                     /db_xref="GeneID:305408"
                     /db_xref="RGD:1304914"
                     /translation="MERPPLLLPLALLALLWGGERGAVALPAGCKHDGRARGTGRAAG
                     AEGKVVCSSLELAQVLPPDTLPNRTVTLILSNNKISELKNGSFSGLSLLERLDLRNNL
                     ISRIAPGAFWGLSSLKRLDLTNNRIGCLNADVFRGLTNLVRLNLSGNLFTSLSQGTFD
                     YLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQAQPVTGVKQEL
                     LTCGPPLELPSFYMTPSHRQVVFEGDSLPFQCMASYIDQDMQVLWYQDGRIVETDESQ
                     GIFVEKSMIHNCSLIASALTISNIQAGSTGNWGCHIQTKRGNNTRTVDIVVLESSAQY
                     CPPERVVNNKGDFRWPRTLAGITAYLQCTRNSHSSGVYPGNTQDERKAWRRCDRGGFW
                     ADDDYSRCQYANDVTRVLYMFNQMPLNLTNAVATARQLLAYTVEAANFSDKMDVIFVA
                     EMIEKFGRFTKEEKSKELGDVMVDVASNIMLADERVLWLAQREAKACSRIVQCLQRIA
                     THRLASGAHVYSTYSPNIALEAYVIKAAGFTGMTCSVFQKVAASDRTGLSDYGRRDPD
                     GNLDKQLSFKCNVSSTFSSLALKNTIMEASIQLPSSLFSPKQKREVRATDDSLYKLQL
                     IAFRNGKLFPATGNSTKLADDGKRRTVVTPVILTKIDGVTTDTHHVPVNVTLRRIAHG
                     ADAIAAQWDFDLLNGQGGWKSDGCCILYSDENITTIQCGSLGNYAVLMDLTGSELYTP
                     AASLLHPVVYTTAITLLLCLLAVIISYMYHHSLIRISLKSWHMLVNLCFHIFLTCVVF
                     VGGITQTRNASVCQAVGIILHYSTLATVLWVGVTARNIYKQVTKKAKRCQDPDEPPAP
                     PRPMLRFYLIGGGIPIIVCGITAAANIKNYGSRPSAPYCWMAWEPSLGAFYGPASFIT
                     FVNCMYFLSIFIQLKRHPERKYELKEPAEEQQRLAANENGEINPQDSMSLSLISTSTL
                     ENEHSFQSQLLGASLTLLLYITLWMFGAMAVSLDYPLDLVFSFFFGASCLSFSAFIMV
                     HHCINREDVRLSWIMMCCPGRGSYSVQVNVQPPTSSAANGEAPKCTNSSAESSCTNKS
                     ASSFKNSSQGCKLTNLQAAAAQYHSNALPVSATPQLDNSLTEHSMDNDIKMHVAPLDV
                     QFRANMHPSRHHKNRSKGHRASRLTVLREYAYDVPTSVEGSGQSGSPKSRPGSSEGHS
                     RSRRAYLAYRERQCNPPQQDSSDAGSTLPKSGRNVEKPLSTSSKKDAPRKPAAADLES
                     QQKSYGLNLAVQNGPVKSNGQEGPLLATDITGNIRTGLWKHETTV"
ORIGIN      
        1 tcgcgcgggg aggagccggc gggaggaggc ggcgctcccg cgggccgagc gccgagcggc
       61 gacccggcgg ccctgacccc gcggctccgc ggtgggcgag tgcggccgcg gacaaaggag
      121 catgtcgttg cgaagcagga ccgatcctcg ggccgccggg aggctcgggc caccgccaga
      181 cccgccccgc ctcgccgcca cccgctaggc cggtgccgcc tctcggcccc gcaggcccgg
      241 tcagcggcat ggagcggccg ccgctgctgc tgccgctggc gctgctcgcc ctgttgtggg
      301 gaggagagcg cggggccgta gcgctgcccg cgggctgcaa gcacgacggt cgggcccggg
      361 gtaccggcag ggcggccgga gccgagggga aggtggtgtg cagcagcctg gagctcgcgc
      421 aggttctgcc cccggacacg ctgcccaacc gcacggtcac cctgattttg agcaacaaca
      481 agatatccga gctgaagaat ggttcatttt ctgggttaag tctcctcgaa agactggacc
      541 tccggaacaa tcttattagt aggatagccc cgggtgcctt ttggggactg tcttcactga
      601 agagattgga cctgacaaac aaccgaatag gttgtctgaa tgcagacgtt tttcgaggac
      661 tcaccaatct ggttcggcta aacctttcag ggaacctgtt tacttcactg tctcaaggaa
      721 ctttcgatta tcttggctca ttgcggtctt tagaatttca gactgagtac cttctgtgtg
      781 actgtaacat tctgtggatg catcgctggg taaaggagag aaacatcact gtgcgggaca
      841 ccagatgtgt ttatcccaag tcactgcagg cccagccagt cacaggggta aagcaggagc
      901 tcttgacttg tggtcctccc cttgaactgc cgtccttcta catgactcca tcacaccgcc
      961 aggttgtgtt tgaaggagac agccttccct tccagtgtat ggcttcctat atagaccagg
     1021 acatgcaagt gctgtggtat caggatgggc gcattgttga gaccgatgag tctcaaggga
     1081 tctttgtgga gaaaagcatg attcacaact gctccttgat tgcaagtgcc ctgaccattt
     1141 ctaacattca agccgggtct actggaaatt ggggctgtca tattcagacc aaacgtggga
     1201 ataatacaag aactgttgat attgtggtac tagaaagctc tgcccaatac tgtccaccgg
     1261 agagggttgt gaacaacaaa ggtgatttca ggtggcccag aacactggca ggcatcacag
     1321 catatctcca gtgtacccgg aacagccaca gcagtggggt ctatcctgga aacacacagg
     1381 atgaaaggaa ggcatggcgc agatgtgaca gaggtggctt ttgggcagat gatgattatt
     1441 ctcggtgcca gtatgcaaat gatgtcacta gagttctgta tatgttcaat cagatgcccc
     1501 tcaatcttac gaatgcggta gctacggctc ggcagctgct ggcttacaca gtagaggctg
     1561 ccaacttctc ggacaaaatg gatgttatat ttgtggctga aatgatagaa aagtttggaa
     1621 gatttaccaa agaggaaaaa tcaaaagagc ttggtgatgt gatggttgat gtggcaagca
     1681 acatcatgtt ggctgatgag cgggtgctgt ggctggcaca gagggaggca aaggcctgca
     1741 gccgaattgt ccagtgtctg cagcgcattg ccacacatcg cctggccagt ggggctcacg
     1801 tgtactccac atattcgccc aatattgctc tggaagctta tgtcatcaag gctgctggct
     1861 tcacagggat gacctgctcc gtgttccaga aagtggctgc ctccgaccgc acaggtcttt
     1921 ctgactatgg gcgaagggac ccagacggga acctggacaa gcagctcagc ttcaagtgca
     1981 atgtttccag caccttctcc agcctggccc tgaagaacac catcatggag gcctctattc
     2041 agcttccttc ctcccttttc tcaccaaaac aaaagcggga agtccgagca actgatgact
     2101 ccctctacaa gcttcaactc atcgcattcc gcaacggaaa gctttttcca gccactggaa
     2161 attcaaccaa gttggcagat gatggcaagc ggcggacagt ggtgactcct gtgatcctca
     2221 ccaaaataga tggtgtgacc acagataccc accacgtccc tgtcaatgtg acgctgcggc
     2281 gaatcgccca cggagcagac gccatcgctg cacagtggga ctttgatttg ctgaacggac
     2341 aaggaggctg gaagtcagat ggctgctgta tactctactc ggatgagaac atcaccacca
     2401 ttcagtgcgg ctccctgggc aactatgctg tgctaatgga tctgaccgga tccgaattgt
     2461 acaccccagc agccagtctc ctgcaccctg tggtttatac caccgccatc actctcctct
     2521 tatgtctctt ggccgttatc atcagttaca tgtaccacca cagtttgatt cgaatcagtc
     2581 ttaagagctg gcacatgctc gtgaacttat gctttcatat tttcctgacc tgcgtggtgt
     2641 tcgtgggagg aataacccag accagaaatg ccagcgtctg tcaagcagtt gggatcattc
     2701 ttcattattc tacccttgcc acggtgctgt gggtcggagt cactgctaga aacatctaca
     2761 aacaagtcac gaagaaagcc aagaggtgcc aggatcctga cgagccgccc gcccccccac
     2821 ggcccatgct gcggttctac ctgattggtg gcgggatccc catcatagtg tgtggtatca
     2881 cggcagcagc aaacatcaag aactatggca gccggcccag tgcaccctat tgctggatgg
     2941 cctgggaacc gtccttggga gccttctacg gacctgccag cttcatcact tttgtaaact
     3001 gtatgtattt tctaagcata tttattcagt tgaaaagaca ccctgagcgc aaatacgagc
     3061 tcaaggagcc ggcagaagag cagcagagat tggcagctaa tgaaaatggt gaaatcaatc
     3121 ctcaggactc catgtctttg tctctcatct ctacatccac actggaaaat gagcacagtt
     3181 ttcagtccca gcttttgggg gccagcctta ctctgctttt gtatatcacc ttgtggatgt
     3241 tcggggccat ggcggtctct ctggattacc ctttagactt ggttttcagc ttcttctttg
     3301 gagcctcttg tctgagcttc agtgctttca tcatggtgca ccactgcatc aacagggagg
     3361 acgtgaggct ttcgtggatc atgatgtgct gcccgggacg gggctcctac tcggtgcaag
     3421 tcaatgtcca gcctcccacc tcaagtgcgg ctaacggaga ggctccaaag tgcacgaata
     3481 gcagcgcaga gtcttcatgc acaaacaaaa gcgcatcgag cttcaaaaac tcttcccagg
     3541 gctgcaagct aacgaacctg caggctgctg cagcacagta ccacagcaat gccttacctg
     3601 tgagtgccac acctcagctt gataacagcc tgaccgaaca ctcgatggat aacgatatta
     3661 aaatgcatgt ggctccttta gacgtgcagt ttcgagcaaa catgcatcca agccgccatc
     3721 ataaaaaccg aagtaaagga caccgggcca gcagactcac ggtcctgcga gagtatgcct
     3781 atgatgtccc cacgagcgtg gaaggcagcg ggcagagcgg ctcacctaag agccggccag
     3841 gcagcagtga aggacattcg aggagtcgga gagcttacct ggcctataga gagaggcagt
     3901 gcaacccacc ccaacaagac agcagtgatg ctggtagcac gcttcccaaa agtggccgaa
     3961 atgttgaaaa gcctctttca actagtagta agaaagatgc gccaaggaag ccagctgcag
     4021 ctgaccttga aagccagcag aagtcgtatg gcctgaactt agctgttcag aatggaccag
     4081 ttaaaagcaa tgggcaggaa ggacccctgc tagctactga tattactggc aatattagga
     4141 ctgggctgtg gaaacatgaa acaactgtgt agcactgcga gggcttccaa gacagggtga
     4201 aactgtgaca ctcacattcc tttaagctat gaactcttag aaacaaactg tttacagcca
     4261 ccccagggat acaaaacagt tctgaatatt cttgtgagtt ttgggactta cttattttat
     4321 attcctaaat tgcccttccc cagaggttaa aaacatgttt taaacattgt tttacttatc
     4381 aaagtaccaa taagatattt tggaagttga aaa
//
