LOCUS       XM_039101254            4606 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus adhesion G protein-coupled receptor A1
            (Adgra1), transcript variant X2, mRNA.
ACCESSION   XM_039101254
VERSION     XM_039101254.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039101254.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4606
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4606
                     /gene="Adgra1"
                     /note="adhesion G protein-coupled receptor A1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 24 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:309097"
                     /db_xref="RGD:1308241"
     CDS             1169..2902
                     /gene="Adgra1"
                     /codon_start=1
                     /product="adhesion G protein-coupled receptor A1 isoform
                     X1"
                     /protein_id="XP_038957182.1"
                     /db_xref="GeneID:309097"
                     /db_xref="RGD:1308241"
                     /translation="MTQWDLKTVLSLPQYPGEFLHPVVYACTAVMLLCLLASVITYIL
                     HQSAIRISRKGRHALLNFCFHAALTFTVFAGGINRTKHPILCQAVGIALHYSTLSTML
                     WIGVTARNIYKQVTKKALPCPGADQPPYPKQPLLRFYLISGGVPFIICGVTAATNIRN
                     YGTEDEDVAYCWMAWEPSLGAFYGPAAFITLVTCVYFLCTYVQLRRHPERRYELRERT
                     EEQQRLAVPETGHRHGMRPGTPPTCDALAASQLQNEHSFKAQLRAAAFTLFLFTATWT
                     FGALAVSQGDFLDMIFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWWSCCPSRGDTSA
                     TKPSAHPTLDANGDALGHTACLQDSPCPGKLRGFGHPPASHCKMTNLHAAQGHVSCLS
                     PATPCCAKMHCEQLMEEEAHVHMGEEDAFPHDHHLHDPHLHRCLKGRTKPHYFSRHQA
                     AAAEREYAYHIPSSLDGSPHSSRTESPTSSLEGPMGVHTLACCAQADPFPMVSQPEGG
                     DTSPGLYGCPPRLSPGPAHLEMLRRTQSLPFGSPSQNGLLQGDVREGLPFGTDGTGNI
                     RTGPWKNETTV"
ORIGIN      
        1 gggcacggcg cgctgccgtg gtccgcgcct cccccagtcc ccatggttac agctcctgct
       61 tcccggccgg tccttcattc ccctggctgt tgctgcagaa atcaggcgcg caggcggctg
      121 gcgtccccca acccagagct ggaaactgcc tgcagagagc gcattggatg cctgctcttc
      181 tcggctctga ctcactccct ccgggtgcag agctccgtcc ccagcgcagt gctctggcca
      241 cagccagtcg ccaggctgca gccctgcaat ctgttgataa ctccactcat aagctccaat
      301 ctaatgcctt tcgtcataga aagctgttcc ctagcacgag ggacatgcca catctcgcct
      361 gtgagaagcg ggagacctgt gcctcttcag ctgcctttac caaaataggt gggtcagcct
      421 gcaggtcccc actcattttc tcacagtcac tctgaggtag ccctcccagg agctcgactg
      481 tgactgctgt ttgggacttg accttccaga tggccatgga ggccagaggg gagaagggca
      541 caacatagtg gtcggtgcca gcaaccccaa cggtgcgctt gcctccctaa ctctgcaggg
      601 ctcatggtct aaatggctag aaccgtctca gagctaccat tctgtcagac agagcttttc
      661 cggtctcaac attctcctga actatccaca ctaagaaagc aactgccagc ctagaaggaa
      721 acactcttca aaatgtctgt cttcaaacct cttcatgact tctccgtccc atgtatccct
      781 ctaaaaagga aatcccagca aactatgttc atgtaacgtc cactggcatt ctaagagaat
      841 gagtgactta ccttctgttt gtcccatgga aggctgatct attgataaga tacagttatc
      901 actgaaaaga caagcaagga aatgcatcag gctctcttga aaccagtctg ggttggtgca
      961 gaaccagaaa ataaaaaaat acagaacgga gaaacaagaa taagaaaatc tacacacagc
     1021 gactcccact ggtgagtccg gcacttgaga agctgaggca gctgtagagg gagatcctgc
     1081 cacaaaacaa aagagaacaa aagcacagat ggaaccgagg aagacagcgc aggaagacta
     1141 agttgaaaga aggaccgagg ctgaggagat gactcagtgg gatttgaaga ctgtcctctc
     1201 cctgccccag tacccagggg agttcctgca tcccgtggtg tatgcctgca ctgcggtcat
     1261 gctcctatgt ctccttgcct ctgtcatcac ctacatcctg catcagagtg ccatccggat
     1321 aagccggaaa ggccggcatg cactcctcaa cttctgcttc cacgcagctc tgaccttcac
     1381 cgtgtttgct ggtggcatca accgcaccaa acaccctatc ttgtgccaag cggtgggcat
     1441 tgcactgcac tattccacgc tttctaccat gctgtggatc ggagtgactg ccaggaacat
     1501 ctacaaacag gtgaccaaga aggccctgcc gtgcccaggt gcagaccagc cgccgtaccc
     1561 caagcagccc ttgctcaggt tctacctcat cagcggaggg gtccctttca tcatctgtgg
     1621 ggtcacagct gccacaaaca tcagaaatta tgggacagag gatgaggacg tggcatactg
     1681 ctggatggcc tgggaaccca gcctgggtgc attctatggg ccggctgcct tcattactct
     1741 ggtcacttgt gtgtacttcc tctgcaccta cgtgcagctg cggcgtcacc cagagcgcag
     1801 gtacgagctc agagagcgca cggaggagca gcagcggctg gcagtgccag agactggcca
     1861 tcgccatgga atgcgtcctg gcacaccacc cacctgtgat gccctggctg cctcgcagct
     1921 gcagaatgag cattccttca aggcccagct ccgtgccgct gccttcacgc tgttcctgtt
     1981 cacagccacg tggacctttg gagctctggc cgtgtctcag ggcgactttc tggacatgat
     2041 cttcagctgt ctgtatggcg ccttctgcgt gacactggga ctctttgtgc ttatccacca
     2101 ctgcgctaag cgagaggatg tgtggcagtg ttggtggtca tgttgccctt ctcggggaga
     2161 tacctccgcc accaagccca gtgcccaccc cacacttgat gccaacgggg atgcgctggg
     2221 gcatacagcc tgcttgcagg actcaccatg ccctggaaaa ctcagaggtt ttggccatcc
     2281 accagccagc cactgcaaga tgaccaacct gcatgctgcc caaggccatg tcagctgtct
     2341 gtcccctgcc accccctgtt gcgccaagat gcactgtgag cagttaatgg aggaggaggc
     2401 ccatgtacac atgggtgagg aggacgcctt cccacacgat caccatctgc atgaccctca
     2461 cctgcacagg tgcctcaagg gcagaactaa gccccactac ttcagccggc accaggcagc
     2521 tgcagctgag agggaatatg cctaccacat cccctccagc ctggatggca gtccccacag
     2581 ttcacgtaca gagagcccca ccagctctct tgagggcccg atgggggtgc acacattggc
     2641 ctgctgtgcc caggctgacc cctttcccat ggtcagccag cctgagggtg gagacacaag
     2701 ccctgggctc tatggctgtc ccccacgcct gtccccaggc cctgcccact tggaaatgct
     2761 acgaaggaca caatccctac cttttgggag cccaagccag aatgggctac tccagggtga
     2821 tgttcgagaa ggcctgccat ttggcactga tgggacaggg aatatccgaa caggaccctg
     2881 gaaaaatgaa actacagtgt agccaggttg agaacacaac tccttcacca gtgccaccat
     2941 gtgtccctgg aggagcttca gagcagggaa tggccctttg ctttgtgggg ttaataggct
     3001 gggagggtca tcaaatgacc aagtggttct gaaatggttc acacccctta gccatgacct
     3061 cttttattgt ggaagaaccc attggaagaa cgctgggcca cgtacacctc tcctggtccc
     3121 caggagggaa gtagacctcc ataagcttgt cacctgcttt ctgtttatag cacctgccct
     3181 tgctgccggg agggaagcta ggagagcccc tcagagactc cagctggtgt tcttgccttt
     3241 ggtagacgta tgttaggttt tactctaggg accacagccg tggccctcag agctcgctcg
     3301 cactgggcag tttcctgtct cctgtcatcc ttgcgttacc tcacatctgc atcttcacag
     3361 ggggcccacc ctggcacctc tgcctgctca ccacctgcac ctgtatggga catggccctg
     3421 gcctgatagc ctgaggtcat tttgggtgct aaggatgggc ctggtacgga gccatgggga
     3481 gaggaagcaa ctaagggctg tggccttcag ggagctggct gcaatctctc tgggcctgtg
     3541 cttttgaaag tcagccactg tcagactgga ttctgttcca gtgtgagcat gtagtagtca
     3601 agttctctga ccccaaggag gggctaagtg gggtgtgatg ttcatcacgg atgaaggttt
     3661 cttaccacag acgaagcttt cttttccttt ttgccacttt cacgaacatt ttgggtacaa
     3721 aaccccacct caaagagtat atttcaacaa tgagcctttt gtaaaagcaa gtgtcttctc
     3781 ctaggggaga tccccacaga ggtgaaagcc cagagatgcc aacctgtgag actgtccacc
     3841 tttcctgtct agctttctct tcccaatttg tagtccatat gcatacatat gtgtacacac
     3901 acacacacac acacacacac acacacacac acaggcatac atacacacac acaaacaaac
     3961 cacacatgca catgtttgta tgtacacaca tgtgtaaaca cacatgctta tacacattta
     4021 cagttacacc aggcacacca catacatgtg catctacaca cttgctcacc atgtacatgc
     4081 atgtgcacat gcctgcacag caccacacat atatgcacac acactgcagt gtccacatag
     4141 agacacactg gtgttcatat gcacccacaa acaattagtg tgtatcatag ccctgagtgc
     4201 tgggtttctt tgcagatgtg ggcgagtctg tgacttgctt cacagagcac agccttcctg
     4261 ataaccgcct cagagaacag gacttgggta agttcctaga gcattggggg ggcagcacat
     4321 tctgcagcct gtggtgagca gtgccatcta gaggcagaca ctcagtatct gagtaaggag
     4381 actgacaggc agatctgaca tctacagctc ctctgtgatg tccctgaaag cagcattctg
     4441 tacccatccc tcgggtgggt agccagggac caccaggctg tttcagctcc tgtcaccaac
     4501 agacttcttt acctgcttgc gtagctgatg tgtgcagaac ccaccatgct gtgtacgtac
     4561 tgtagataca gaccatccag aggaaaatac agtgttttac attgtt
//
