LOCUS       XM_039098475            5481 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus androglobin (Adgb), transcript variant
            X1, mRNA.
ACCESSION   XM_039098475
VERSION     XM_039098475.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039098475.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5481
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5481
                     /gene="Adgb"
                     /note="androglobin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 ESTs, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:292477"
                     /db_xref="RGD:1564259"
     CDS             223..5262
                     /gene="Adgb"
                     /codon_start=1
                     /product="androglobin isoform X1"
                     /protein_id="XP_038954403.1"
                     /db_xref="GeneID:292477"
                     /db_xref="RGD:1564259"
                     /translation="MTSKQAKRKEVHRINSAHGSDKSKDLYPFGSNVPPGSSEQKRGK
                     FPIWPEWSEADINAEKWDAGKGGKEKDKTGKSPIFHFFEDPEGKIELPQSLKVFSWKR
                     PQDFIFSRIPVVVKNEMTFDLFSSNGHLLCSELMRWIISEIYAVWKIFNGGILSNYYK
                     GNSGELPILPWKPWEHIYSLCKAAKGHMPLFNSYGKYVVKLYWMGCWRKITVDDFLPF
                     DEDNNLLLPATTYDFELWPMLLSKAIIKLANVDIHVAHRRELGELTVIHALTGWLPEV
                     IPLHPAYVDKVWELLKEILPEFKLTEEPSSESKITVIENKLKEPTKENKDVKDGKDGK
                     DGKDGKEAKDGKETKDGKETKDAKDFKPEISLTTLKAPEKGDRAAKEKADAKDLGKKN
                     KKDGEKEKERFKFSLHGSRPSSDVQYSMQSLSDCSSAIQSPQMVVYATFTPLYLFENK
                     IFTLEKMANSAEKLREYGLSHICSHPVLVTRSRSCPLVAPPKPPPLPAWKLIRHKKET
                     VITDEAQDAVPKKPEQFLEISSPFLNYRMAPFTIPTETHFVQSVIKKGTPLGSSLPPL
                     VESDLAASTSQGEMSIIAGNQSQANIALQTTPGKDEPSEPALADAHQLEAISLERDLI
                     SLTTATLDKSQEELAVNESVSKEIWLDFEDFCVCFHHIYIFHKPNSYCLNFQKSEFKF
                     MEERVPYYLFVDSLKPIELLVCFSALVRWGESGALTKESPPVEPGLLTAEAITWKSLK
                     PLSVVLRIHTYATKASMVRLPVGRHMLLFNAYSPVGHAIHVCSMTTFVIGDEDVVLPN
                     FEPESYRFTEQSVMIMKAIGNVIANFKDRGKLPAALRDLQAAHYPIPLNNKELTLQHF
                     RVFHISLWRLMKKSQVAKPPLNFKFAFRAMVLDTDLLDSFSEDASLAEWVDLKYSMPV
                     NEKEYSPEEIAAAVKIQSMWKGNYVRLLMKARTPETKENISVADTLQKIWAVLEMNLE
                     QYALSLLRLMFKSKCKSMESYPCYQDEETKLAFADHTVNYTDQPPNSWFIVFRETFLV
                     PQDIILLPKVYTTLQICMLHVINNDTLEQVPKVFQKVVPYLYSKNKKGYTFVAEAYTG
                     DSFVSGSRWKLRLIGSYNPLPFLARDTPCSTFTIKEIRDYYIPNDKKILFRYSIKVTM
                     AQSITIQVRTSKPDAFIKLQVLESEEIIMSTVGKGQALIPAFYFLGNEKALSSQSSKQ
                     VLLTHTLPKKEPEVLTKKKAGQPGQKSFKGRTGGGMTETGMPLLEEEVMSVPTIEENS
                     STPQQCYKYIIQCLVLFNSWPLNETQLTFVQALKDMEKIDIKAHVEKHEEPAPMGSPD
                     SHAVSEGQKSVGMPKTTRKGKERSAEKEKSAREKQTPRFEPQQMQVPTAAHSQQEDPN
                     KPYWTLRLVSEHTDSEYVDVKKDTERADEIRAMKQAWETTEPGRAIKASQARLKYLTQ
                     FIKKPPETSAPATSPEALSVTQSQIKSSEEGEQAGGTGKDADTKELPPTAAGSMLWKK
                     WQLTKTLSVLSKATSSESSPKEEPPRKEIPVVVQSRSPTILETSPQQIRKALEFLDFN
                     HYVRKTADEAVLQTDELSKHQAMQKAEEIHQFRQYRARILSIRDIDQEERVKLKDEVL
                     DMYGEMRDSVDEARQKIFDIREEYRNKLLEAERLRMEALAAQEAAVKLEAEKKTAASD
                     PQKKKKGGKKK"
ORIGIN      
        1 tcacagttcc ttcccggaca ccaactccta gacaccaact cctaggtcta aagccgagtc
       61 ttcaaacgga gcccgccctc cagccagccg gcctgggagg agccttccgt ttctcagaac
      121 tcgctcgctg tctcctggca acagcagacg cgggaagcct tgagggcctt gttgcgctct
      181 ctcattcggc cctgctggag gctgctccgg tgggcctcag gcatgacttc caaacaagct
      241 aaaaggaaag aagtgcatcg gatcaattct gcccatggat cagataaatc taaagatctc
      301 tacccttttg gcagcaatgt gccacctggt tcttccgaac agaagagggg aaagttcccg
      361 atctggccgg agtggagcga ggcagacata aatgctgaaa agtgggatgc aggcaaaggt
      421 gggaaggaga aggacaagac cggcaagagc cccatcttcc actttttcga agaccctgaa
      481 ggaaagattg aattaccaca gtcattgaaa gtgttttcct ggaaacgccc gcaagatttt
      541 atatttagcc gaattcctgt agttgtgaaa aatgaaatga cgtttgactt gttttcatca
      601 aatggacatt tactctgcag tgagcttatg aggtggatta tcagtgaaat ctatgcggtg
      661 tggaaaatat tcaatggcgg gatcctaagc aattactata agggaaattc aggagagctt
      721 cctattctac cctggaaacc ctgggaacac atatactctc tctgcaaggc cgcgaagggt
      781 cacatgcctt tgttcaacag ctacgggaag tatgtcgtaa agctctactg gatgggctgc
      841 tggaggaaga taactgtcga tgacttcctg ccattcgatg aagataacaa tctactgctt
      901 ccagctacaa cctatgactt tgagctctgg cccatgctac tgtcaaaagc tatcattaag
      961 ctggcaaatg ttgacatcca tgtagcacac aggagagagc tgggagaact cacagtaatc
     1021 cacgctctta ctgggtggtt acctgaagtc atccctcttc atccagcata tgtggacaaa
     1081 gtctgggagc tcttgaagga aatactgcct gagtttaagc tcacagaaga gcccagctct
     1141 gaaagcaaaa tcacagtgat agaaaacaaa ctgaaggaac ccacaaaaga gaacaaggac
     1201 gtcaaggatg ggaaggacgg caaggacggc aaggacggca aggaagcgaa ggacggcaaa
     1261 gaaacgaagg atggcaaaga aacgaaggat gcaaaggact tcaaaccgga aatctccctt
     1321 acgaccctga aggctcctga gaaaggtgac agagctgcaa aggagaaagc agatgcaaaa
     1381 gaccttggga agaagaataa gaaggatgga gagaaggaga aggaaagatt caaattttca
     1441 ctccatggtt ccagaccctc atctgatgtt cagtactcta tgcagtcctt gtcagattgt
     1501 tcctcagcaa tacagtcccc tcagatggtt gtatatgcta cctttacacc actctatttg
     1561 tttgaaaaca agatatttac attagagaag atggcgaatt ctgcggagaa acttagggaa
     1621 tatggtcttt ctcacatctg tagccatcct gtgctggtga ccagaagtag gtcttgtccc
     1681 ctggtggcac cccccaaacc tcctccttta cctgcctgga aactcattcg ccacaaaaag
     1741 gaaacagtga tcaccgatga agctcaagat gctgttccga agaagcctga gcagtttctt
     1801 gagatttcaa gtccattttt gaattataga atggctccat ttacaatccc aacagaaacg
     1861 cattttgtac aatctgtcat taagaaagga acgccgctgg gatccagtct tcctcccctt
     1921 gtggaaagtg atttagctgc aagtaccagc caaggggaga tgagcataat agctggaaat
     1981 cagtctcagg ccaatattgc attacaaacc acacctggaa aagatgaacc ctcagagcct
     2041 gccttggcgg atgcccacca acttgaggct attagcttag aaagggactt gattagcttg
     2101 actacagcaa cactggacaa gtcacaggaa gagctagcag taaacgaaag tgtttccaaa
     2161 gaaatatggc tagattttga agacttttgt gtgtgctttc accatatata tattttccac
     2221 aagccaaatt cttattgtct taattttcaa aaatcagaat tcaagttcat ggaagagcgt
     2281 gtgccctact atctctttgt ggacagcctg aagcctattg aactactggt ttgcttttct
     2341 gctttggtgc gctgggggga atctggagcc ttaacaaaag agagtcctcc tgtggagcct
     2401 gggctcctga cagctgaagc catcacctgg aagtccctga agcctcttag tgttgttctg
     2461 aggattcaca cctatgctac gaaggccagc atggtgcgtc tgcctgttgg gaggcatatg
     2521 ctgctcttca atgcatattc ccctgtgggg catgccatac atgtctgcag catgacaaca
     2581 tttgtcattg gtgatgaaga tgttgtactg cccaactttg agccggagag ctaccgattt
     2641 acagaacagt ctgtaatgat tatgaaggct attggcaatg tgattgctaa tttcaaagac
     2701 agaggtaaat tgcctgcagc tctgagggat ctgcaggcag ctcactaccc tatccccctc
     2761 aacaacaaag aactcacgct tcaacacttc cgggttttcc atatatcatt gtggcgttta
     2821 atgaaaaaat ctcaagtagc caagcctcct ttaaacttca aatttgcatt tcgggctatg
     2881 gttttagaca cggacttgct ggattccttc tcagaggatg cctctttagc ggaatgggta
     2941 gaccttaaat attctatgcc agtaaatgaa aaggagtatt ctcccgagga aatagctgct
     3001 gcggtgaaaa ttcagtccat gtggaaaggg aactatgtca gactgctcat gaaagccagg
     3061 acaccagaaa caaaggagaa tatcagtgtt gcagatacac ttcagaaaat ttgggcagta
     3121 ttggagatga atttggagca atatgcactg tctctcttaa gactaatgtt taaaagcaag
     3181 tgtaagtcta tggagtccta cccatgctat caagatgagg agaccaagct ggcctttgct
     3241 gaccacaccg tgaactatac agaccagcca ccaaattcct ggtttatagt attcagagaa
     3301 acatttttgg ttcctcaaga tataatctta ctccccaaag tatatactac actccagata
     3361 tgcatgctgc atgttattaa caatgacacg ttggagcagg tgccaaaggt gtttcagaaa
     3421 gtggtgcctt acctttactc caagaacaag aagggatata catttgtggc tgaagcgtat
     3481 actggtgact cattcgtatc aggctcacga tggaaactgc ggctcattgg ctcttacaac
     3541 ccactcccgt ttctcgcccg tgacactcca tgcagcacct tcaccataaa ggaaatcaga
     3601 gactactata ttcctaacga caagaaaatt ctgttcaggt actccattaa agtgacaatg
     3661 gcacagtcta ttacaataca ggtccgcaca tccaaacccg atgccttcat caagctgcag
     3721 gtgctggaaa gcgaggagat catcatgagc actgtgggca aagggcaagc cctcatccca
     3781 gccttctact tcctgggcaa tgaaaaagca ttgagctccc agtctagcaa gcaagttctc
     3841 ttaactcaca ccttacctaa gaaagaacca gaagtgctga ccaagaaaaa agctgggcaa
     3901 ccaggccaga aatccttcaa aggaagaact ggaggaggaa tgacagagac aggaatgcct
     3961 ctgctagaag aagaagttat gagcgtaccc actattgaag aaaattccag cacaccacaa
     4021 cagtgctaca agtacatcat acagtgcttg gtgttgttta acagctggcc tctgaatgaa
     4081 actcagctga catttgttca agcactaaaa gacatggaga aaattgacat caaagctcat
     4141 gtagagaaac atgaagaacc agctcccatg ggaagcccag attcccatgc tgtcagtgaa
     4201 gggcagaaat ctgtaggaat gcccaaaaca acacggaaag gcaaggagag gtctgccgag
     4261 aaagaaaagt cggccaggga aaaacaaact cctcggtttg aacctcagca aatgcaagtg
     4321 cccactgctg ctcactctca gcaagaagat ccaaacaagc cctactggac cttgcggctg
     4381 gtctctgaac acaccgactc agaatacgtg gatgtgaaaa aggacacaga acgagccgat
     4441 gagatacggg ccatgaagca agcttgggag acgacagaac ccgggagggc catcaaggct
     4501 tcccaggccc gtttgaagta cctgacccaa ttcattaaga agccacctga aacctctgcc
     4561 cctgccacca gccctgaggc tttgtctgtg acacagagcc aaattaaatc ctcagaagaa
     4621 ggagaacaag caggaggtac tgggaaagat gcagacacaa aagaactgcc accaaccgca
     4681 gcaggaagta tgctgtggaa aaagtggcaa ctgaccaaga ccctcagtgt tctgtcaaaa
     4741 gccacaagca gtgagagttc accgaaggaa gagccaccac ggaaggagat ccctgtggtg
     4801 gtccaatcac gatctccgac aattttggaa acatctccac aacaaattcg taaagcacta
     4861 gagtttttgg atttcaatca ctatgtacgg aaaacagctg atgaggccgt gctgcagaca
     4921 gatgaactga gtaagcatca ggcgatgcag aaggcagagg agatccacca gttccggcag
     4981 taccgcgccc gtatcctcag catccgagac atcgaccagg aagagcgcgt caagctaaag
     5041 gatgaggttc tggacatgta tggggagatg cgggactccg tagatgaagc caggcagaag
     5101 atctttgaca tccgggagga gtacaggaac aagttgctgg aggcggagcg tctgaggatg
     5161 gaggcgttgg cagcgcagga agccgcagtg aagttggagg cggagaagaa gaccgcagcc
     5221 tctgacccac agaagaagaa gaaaggagga aagaaaaagt agcgccgccc cacgttgcac
     5281 tatgccacag cgggagcgtc ggacgcactg tcagtcacgg tgcctcttgg tcaaacatta
     5341 gatcaactga accagagaaa atgtcccgca ctcatggtta atacatttta atgttaacat
     5401 gttggttttt gctacaaaat atttgaaggc actagcttct caaatgttct aatttcatta
     5461 aaatcgttaa caaatgctca a
//
