LOCUS       XM_017590907            3807 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAMTS-like 4 (Adamtsl4), transcript
            variant X10, mRNA.
ACCESSION   XM_017590907
VERSION     XM_017590907.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017590907.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017590907.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3807
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3807
                     /gene="Adamtsl4"
                     /gene_synonym="Tsrc1"
                     /note="ADAMTS-like 4; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 24 ESTs, 2 long SRA
                     reads, 7 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 9 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:310670"
                     /db_xref="RGD:1561012"
     CDS             154..3246
                     /gene="Adamtsl4"
                     /gene_synonym="Tsrc1"
                     /codon_start=1
                     /product="ADAMTS-like protein 4 isoform X2"
                     /protein_id="XP_017446396.1"
                     /db_xref="GeneID:310670"
                     /db_xref="RGD:1561012"
                     /translation="MELWLGRLWLYVMLLLLLLQLCQDQELLGPSLQTPSEEDQVPEG
                     LWGPWGRWASCSQPCGVGVQRRSRTCELHPALSLPPRPPRHPEAPQPRGQGSRPQTPR
                     DPQSLYRPQPRGRGGPLRGPASQVGREETQEPRGAQRFRVRDPIKPGMFGYGRVPFAL
                     PLHRSRRLAHKPGQPKDSSTAEETLPSQPPSTEPASEKHSPHMQPPELRAQSRSPSAE
                     TPRSGTAQTEVPSRTSSAPSDMGIPAPTSSFRDSRSFQGSPEPRMPTSQGAERQPHPF
                     SPVTRSQLSRRHWRPPGSPHRSPDGWLPLTRDSSPHWSLFAPSSPTPECSGESEQMRA
                     CSQEPCPPEQPDPRALQCAAFDSQEFMGQLYQWEPFTEVQGSQRCELNCRPRGFRFYV
                     RHTEKVQDGTLCQPGSLDICVAGHCLSPGCDGILGSGRRPDGCGVCGGDGSTCRLVSG
                     NLTDRGGPLGYQKILWIPAGASHLRISQFRPSSNYLALRGPGGRSIINGNWAVDPPGS
                     YAAVGTVFQYNRPPREEGKGETLSAEGPTTQPVDVYMIFQEDNPGVFYQYVTSAAPES
                     PSTMPPALQLQPEMLRGEPLLPSAPRPVRAPGTLQRQARIPQVPPPTHVRTAMGSSAG
                     YWKQVGHSECSASCGKGVWRPIFLCVSRESGEELDEQSCAVGARPPASPESCHRPPCP
                     PYWEAGEWTSCSRSCGPGTQHRQLLCRQEFGGGGSSVPPERCGHLPRPNITQSCQLRL
                     CGHWEISSPWSQCSVRCGRGQRSRQVRCVGSNGHEVGKQECASGPPPPPSREACDMGP
                     CTTAWFYSDWSSKCSAECGTGIQRRAVVCLRSGETLQGDPEAGSTEQGCPLRSRPPDM
                     RACSLGPCEKTWRWYTGPWSECSSECGSGTQHRDIICVSKLGTKFNVTSPSNCSHLPR
                     PPALQPCQGQACEDQWFSTLWSPCSQSCQGGVQTREVQCLSSNHTLSSRCPPHLRPSR
                     KRPCNSQPCNQRPDDQCKDSSPHCPLVVQARLCVYPYYTATCCRSCAHVLEQSQLEPA
                     "
ORIGIN      
        1 aggcagcagg gacagacctg ggggagaaga gaggagcaga gggaggtgga gaggggaccc
       61 gcatcggaca agagacagag caccctccat ccctgatgcc agagtagcta ccctgtccct
      121 tctccccagc ccaggggcag tcacaggaag agcatggagc tttggctggg caggctctgg
      181 ctgtatgtca tgctgctctt gcttctcctt cagctctgcc aggatcagga gctgttgggt
      241 ccttctcttc agacaccatc agaggaggac caggtccctg agggtctctg gggaccttgg
      301 ggccgatggg cctcctgctc ccagccctgt ggggtggggg tgcagcgccg gagccgaaca
      361 tgtgaactgc acccagccct gtccctccct ccccgacccc caagacatcc agaagccccc
      421 cagccccggg gccagggttc cagaccccag actccacggg atccccagtc cctgtatagg
      481 ccacagcctc ggggaagggg tggccctctt cgaggtcctg cttctcaagt ggggagagag
      541 gagacccagg agcctcgggg ggcccagagg ttccgtgttc gagaccctat caagccaggg
      601 atgttcggtt acgggcgagt gccctttgct ttgcccctgc accggagccg caggcttgct
      661 cacaaacctg gacagcccaa ggactcctct acagcggaag agacacttcc atcccagcct
      721 ccaagcacag aaccagcctc tgaaaagcac agcccccaca tgcagccccc tgaactgcgt
      781 gcccaatccc gttccccctc agctgaaact ccaaggtctg gaactgctca gacagaagtg
      841 ccctccagaa ccagttctgc tccctccgac atgggtatcc ctgcacccac ttcctccttt
      901 agagacagta ggtctttcca gggatcccct gagccacgaa tgccaacttc ccagggagca
      961 gagcgacagc cacatccttt ctctcctgtc acccggagcc agctgagccg gaggcactgg
     1021 agacctccgg ggagtcctca caggtcccca gatggctggc tgcctctgac aagggactcc
     1081 agcccacact ggagcctctt tgctcccagt agccccactc cagaatgttc tggggaaagt
     1141 gaacagatga gagcctgcag ccaagagcct tgcccccctg agcagccaga ccccagggcc
     1201 ctgcagtgtg ccgcctttga ctcccaggaa ttcatgggcc agctgtacca gtgggagccc
     1261 ttcaccgaag ttcaaggctc ccagcgctgt gaactgaact gccgcccccg tggcttccga
     1321 ttttatgtcc gtcacactga aaaggtgcag gatgggaccc tgtgtcagcc tggatcccta
     1381 gacatttgtg tggctggaca ctgcctgagc cccggctgtg atgggatcct tggctctggc
     1441 aggcgtccgg atggctgtgg agtctgtggg ggtgacggct ctacctgccg tctcgtttcg
     1501 gggaatctca ctgaccgagg gggccccttg ggctatcaga agatcctgtg gattcctgcg
     1561 ggagcctccc atcttcgcat ttcccagttc cgacccagtt ccaattacct tgcacttcga
     1621 gggcctggtg gccgctccat tatcaatggg aactgggctg tagatcctcc aggatcctac
     1681 gcggccgtcg ggaccgtctt ccagtataac cgtcctcctc gggaggaggg caagggggag
     1741 actctgtcag cagaaggccc taccacccag cctgtggatg tctatatgat ctttcaagag
     1801 gacaacccag gtgtcttcta tcagtatgtc acctctgcag ccccagagag cccttccaca
     1861 atgcctccag cccttcagct tcagcctgag atgctgaggg gggagccctt actcccttca
     1921 gccccccgcc cagttcgggc accaggcacc ctccagcgtc aggcacggat tccccaagtg
     1981 cctcctccga ctcatgtcag gacggccatg ggatcttcgg ctgggtactg gaagcaggtg
     2041 gggcactctg aatgttcagc atcctgtggc aaaggtgttt ggcgccccat cttcctctgc
     2101 gtttcccgtg agtcaggaga agagttggat gaacagagct gtgccgtggg ggccagaccc
     2161 ccagcttccc ctgaatcctg ccatagacca ccgtgtcccc catactggga ggctggcgag
     2221 tggacgtcct gcagccgctc ctgtggccct ggcacccagc atcgccagct gctctgcaga
     2281 caggaattcg gaggcggtgg ctcctcagtg cctccagagc gttgcggaca tctcccccgg
     2341 cccaacatca cccagtcctg tcagctgcgc ctttgtggcc actgggagat tagctccccc
     2401 tggagccagt gctctgtgcg ctgtggtcgt ggtcagagga gccggcaagt gcggtgtgtt
     2461 ggaagtaatg gccatgaggt gggcaagcag gagtgtgctt ccgggccccc gccacctccc
     2521 agcagagagg cctgtgacat gggcccctgt accacagcct ggttctacag tgactggagt
     2581 tccaagtgct cagccgagtg tgggacaggc atccagagac gcgctgtggt ctgccttagg
     2641 agtggggaga cccttcaggg ggacccagaa gcaggaagca ctgagcaggg ttgccctctc
     2701 agaagccgcc ctcctgacat gcgtgcttgc agtttagggc cctgtgaaaa gacatggcgc
     2761 tggtacaccg ggccctggag tgagtgctcc tctgagtgtg ggtctggcac acagcacaga
     2821 gacattatct gtgtatccaa actggggacc aaattcaatg tgacttctcc cagcaactgc
     2881 tcccacctac ccaggcctcc tgccctgcag ccctgtcagg gccaggcctg tgaggaccaa
     2941 tggttctcta ctctctggag tccgtgttct caatcctgtc aaggaggtgt gcagacgagg
     3001 gaagtccagt gcctgagtag caaccacact ctcagctccc gatgtcctcc gcacctgcga
     3061 ccttctagga agcggccctg taacagccaa ccctgcaacc agcgaccaga tgaccaatgc
     3121 aaggacagtt ctccacattg ccccctggtg gtacaggcac ggctctgcgt ctacccctac
     3181 tacacagcta cctgctgccg ctcctgtgcc catgtcctgg agcagtccca actggagcct
     3241 gcttgaaatg ggtccaagag acccctctct tatggttttc tcgcgccacc cattgagata
     3301 gcccaaggag tgtacctgtc cgacctgggt gtttgccccc tgtgaacgtt tatcacttcc
     3361 tcagaagcac cctgagaaag aattaggaag tggacagggc tggcttctct catgcttttc
     3421 tgggctgggg agaaagcaag gttatatttc cacactaatc tgagatacat ggagagtgtg
     3481 tgtccccaga agttccagtt ctgtgcccca atcctcacaa ccacgtcagg cggcacatct
     3541 aacttatctt gttcctatcc ctgcctcatc tagtctctgt attcctacca cccagattag
     3601 caggggtggg ggtcagccac tgctacccta ccttacccga ccgagaagga ccacacctct
     3661 ccagtgtagc gatcagttgt gtcgtgggtg gaaatgagaa acatcagcat aagacaccct
     3721 agccccagcc ctcacttcac actgaaaatg atgcccaccc cagaagtaat ttatttttta
     3781 ttaaagttga ttgtgacaaa taagaaa
//
