LOCUS       XM_231125               3677 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAMTS-like 2 (Adamtsl2), transcript
            variant X1, mRNA.
ACCESSION   XM_231125
VERSION     XM_231125.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 9, 2024 this sequence was replaced by
            NM_001427090.1.
            
            On Jan 21, 2021 this sequence version replaced XM_231125.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3677
                     /gene="Adamtsl2"
                     /note="ADAMTS-like 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 15 ESTs, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 23 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:311827"
                     /db_xref="RGD:1305459"
     CDS             211..3084
                     /gene="Adamtsl2"
                     /codon_start=1
                     /product="ADAMTS-like protein 2 isoform X1"
                     /protein_id="XP_231125.3"
                     /db_xref="GeneID:311827"
                     /db_xref="RGD:1305459"
                     /translation="MDSGWQRSRWAWSLLAMAVVAGGAASTEASDNSPTSNSLEGGAD
                     ATAYWWGEWTKWTACSRSCGGGVTSQERHCLQQRRKSVPGAGNRTCVGTSKRYQLCRV
                     QECPPDGRSFREEQCVSFNSRVYDGRAYQWKPLYPDDYMHISSKPCDLHCTTVDGQRQ
                     LMVPARDGTSCKLTDLRGVCVSGKCEPIGCDGVLFSTHTLDKCGVCQGDGSSCTHVTG
                     NYRKGDNHLGYSLVTHIPAGARDIQIVERKKSADVLALADEAGFYFFNGNYKVDSPKN
                     FNIAGTVVKYRRPMDVYETGIEYIVAQGPTNQGLNVMVWNQNGKSPSITFEYTLLQSP
                     HMHHLPPVYYSFSEAASESTESTERQELDSARLLGFLQHNGSLYGQPSSERLGLNSQL
                     FPPTAPEVELGPSRGQETNEVCKQASGGVCEGPPRGKGFQDHNATGRALLGDKDDREI
                     SAHFTSHELLSANTISDQLLGTGSDSEEFSLNETMNSIFAQGAPRSSPAESLYVDYEE
                     NEGPAAYLINGSYLELNSDRINTSSEAPFPNTSASLPSLAGNRTHKARTRPKARKQGV
                     SPADMYRWKLSSQEPCSATCTTGVMSAYAMCVRYDGVEVDDSYCDALTRPEPVHEFCA
                     GRECQPRWETSSWSECSRTCGEGHQFRIVRCWKMLSPGFDSSVYSDLCEATEAVRPEE
                     RKTCRNPACGPQWEMSEWSECTAKCGERSVVTRDIRCSEDERLCDPNTRPVGEKNCTG
                     PPCDRQWTVSDWGPCSGSCGQGRTIRHVYCKTSDGRVVPESQCQTETKPLAIHPCGDK
                     NCPAHWLAQDWERCNTTCGRGVKKRLVLCMELANGKPQMRSGSECGLARKPPEESTCF
                     ERPCFKWYTSPWSECTKTCGVGVRMRDVKCYQGTDIVRGCDPLVKPVGRQACDLQPCP
                     TEPPDDSCQDQPGTNCALAIKVNLCGHWYYSKACCRSCRPPHS"
ORIGIN      
        1 gcggccacag agcagccact gggctgagcg cccctcctgg gaacccctcc cttgaatgct
       61 ctttgaagtg ggagagggag gcagctgggg gaagcaagac cagagacagg cagagcccgc
      121 acatctctgt actcaccttc ctgcaccgtg cacctggcag ctagctctca cccctttctc
      181 tgggaggaca acctgctgag cctggggagg atggacagcg gatggcaacg ctcacgctgg
      241 gcttggtctt tgctggccat ggcagttgtg gccgggggtg cggcatctac cgaggcttcg
      301 gacaatagcc ccacatccaa cagcctagag ggaggtgctg atgccactgc ctactggtgg
      361 ggagagtgga ccaagtggac tgcgtgttcc cgcagctgtg ggggcggggt gacatcccag
      421 gagcgccact gcctgcaaca gaggaggaag tctgttccag gtgcagggaa caggacctgt
      481 gtgggcacat ccaaacggta ccagctctgc agagtgcagg agtgtccacc ggatgggagg
      541 agcttccgtg aagaacagtg tgtctccttc aactcccgtg tgtatgacgg ccgggcgtac
      601 cagtggaagc ccctttaccc ggatgactac atgcacatct ccagtaagcc gtgtgaccta
      661 cactgcacca ctgtggacgg ccaacggcag ctcatggtgc cggcccgaga cggcacctcc
      721 tgcaagctca ccgacctgag aggggtttgc gtgtctggaa aatgtgagcc cattggctgt
      781 gatggagtgc tcttctccac ccacacactg gacaagtgtg gtgtctgcca gggggacggg
      841 agcagctgca cccacgtgac gggcaactac cgaaagggtg acaatcatct tggttactcc
      901 ttggtgaccc acattccagc tggtgcccga gatattcaga ttgtggagag gaagaagtcg
      961 gcagatgtgc tggctcttgc agacgaagct ggtttctact tcttcaacgg caactacaaa
     1021 gtggacagcc caaagaactt caacattgct ggtacagtgg tcaagtaccg tcggcccatg
     1081 gatgtctatg agacgggcat cgagtatata gtggcacagg ggcccaccaa ccagggcttg
     1141 aatgtcatgg tgtggaacca gaacggcaaa agcccctcta tcacctttga gtacacgctg
     1201 ctgcagtcgc cacacatgca ccacctgccg ccggtctatt acagcttctc ggaggcagcc
     1261 tctgagagca ccgagagcac cgagcgccag gagctggaca gtgccaggct gctgggcttc
     1321 ctgcagcaca atggctcact ctacggccag ccctcctcag agaggctggg cctgaacagc
     1381 cagctgtttc cgcctacagc ccctgaggtg gagctgggcc caagcagagg ccaggagacc
     1441 aacgaggtgt gcaagcaagc cagcggtggg gtctgtgagg gacctcccag gggcaagggc
     1501 ttccaagacc acaatgccac tgggagagct ctcttggggg acaaggatga ccgggagatc
     1561 agtgcccatt tcacctccca tgagcttctc tcagccaaca ccatctccga tcagctcttg
     1621 ggcacaggct ctgactcgga agagttctca ctcaacgaga ccatgaacag catctttgcc
     1681 cagggtgccc ccagaagctc tccagctgag agcctctatg tggattatga agagaatgag
     1741 gggcctgctg cctacttgat caatgggtct tacctggaac tgaacagtga caggatcaat
     1801 acctcctccg aggccccatt ccccaacacc agcgccagcc tccccagctt ggctgggaac
     1861 aggactcaca aggcaaggac cagacccaag gcacgcaagc aaggtgtgag tccagccgac
     1921 atgtatcggt ggaagctttc atcccaggag ccctgcagtg ccacatgcac cacaggagtc
     1981 atgtctgcct atgccatgtg cgttcgctac gatggcgttg aagtggatga cagctactgc
     2041 gatgccctga cccgtcctga gcccgtccat gaattctgcg ctgggaggga gtgccagccc
     2101 aggtgggaga ccagcagctg gagtgagtgc tcacgcacct gcggtgaggg ccatcagttc
     2161 cgcatcgtgc gctgctggaa gatgctgtct cctggctttg acagctccgt gtacagtgac
     2221 ctctgtgaag ccacagaggc tgtgcggccg gaggaacgca agacatgccg caacccagcc
     2281 tgtgggccac agtgggagat gtctgagtgg tcggagtgca cagccaagtg tggggagcgc
     2341 agtgtagtga ccagagacat ccggtgttcc gaggacgaga gactgtgtga ccccaacacc
     2401 aggcctgtgg gagagaagaa ctgcacggga cctccctgtg atcgccagtg gactgtctca
     2461 gactggggac cgtgcagtgg gagctgtgga cagggccgca caatcaggca cgtgtactgt
     2521 aagaccagcg acggacgggt agtccccgag tcccagtgcc agacagagac aaagcctctg
     2581 gccatccacc cctgtgggga caagaactgc ccagcacact ggctggctca ggactgggaa
     2641 aggtgcaaca ctacctgtgg gcgtggcgtg aagaagcggt tagttctttg catggagctg
     2701 gccaatggga agcctcagat gcgaagtggt tctgaatgtg ggctagccag gaagccccct
     2761 gaggaaagta cgtgcttcga gagaccttgc ttcaagtggt acaccagccc ctggtcagag
     2821 tgcaccaaga catgtggggt aggtgtgagg atgcgagatg tgaagtgtta ccagggaacc
     2881 gacattgtcc gtggatgtga cccactggtg aagcctgtcg gaagacaggc ttgtgactta
     2941 cagccatgtc ccacagagcc cccagatgac agctgccaag accagcccgg caccaactgt
     3001 gcactggcca tcaaagtgaa cctctgtggc cattggtact acagcaaagc ctgctgccgc
     3061 tcctgcaggc ctccccattc ctagctgctg ctgtagcccc caagacataa gcatgccatc
     3121 tggggctttc cttggacacc cgccctgcag gggattctgg actgtgaaga cgtgacttgg
     3181 agcacaactg acaggaaggg actttgacat tgtggccttg tctctgccct gggtgagagc
     3241 ctccagggcc cgcaggcccc ttctcagatg gagccaccct gctgcgggaa actgtacatg
     3301 cactcccagg atcctgtgtc tgtgcccatc ccagagagct cagaggacgg aaaccagagt
     3361 aggcagtacc tgcccattcc ccagacccaa ctctgatgtg acagaaccct ctcaaggtga
     3421 cttgccggtg acgcaggaag gagagagtct cttttctttg gctgtcttgt aaggagggct
     3481 cctgggtcag ctgaggagcc cgggctgccc tgtctctgga aggtactgaa gtaccccttc
     3541 ctatggcatt agtgccactg ttcccctccc agagttcttg tgctagctgg gagggacagc
     3601 cgtgttcctg ggtgtcccta ccagcctcct cactacttac tgtgcatgtt aataaagtgc
     3661 ctgtatttat ggcagca
//
