LOCUS       XM_039111084            9400 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAMTS-like 1 (Adamtsl1), transcript
            variant X6, mRNA.
ACCESSION   XM_039111084
VERSION     XM_039111084.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111084.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9400
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..9400
                     /gene="Adamtsl1"
                     /note="ADAMTS-like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 21 ESTs, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:362539"
                     /db_xref="RGD:1306439"
     CDS             193..5631
                     /gene="Adamtsl1"
                     /codon_start=1
                     /product="ADAMTS-like protein 1 isoform X6"
                     /protein_id="XP_038967012.1"
                     /db_xref="GeneID:362539"
                     /db_xref="RGD:1306439"
                     /translation="MVRLVTRSHPGFLARLICGTWCLLCVAGQVCGDQSQGAVFLREF
                     TLIRRESLHEDFLSDFLNSHKTEDPSSRTARSEEDREGLWDAWGPWSECSRTCGGGAS
                     YSLRRCLSSKSCEGRNIRYRTCSNVDCPPEAGDFRAQQCSAHNDVKYHGQFYEWLPVS
                     NDPDNPCSLKCQAKGTSLVVELAPKVLDGTRCYTESLDMCISGLCQIVGCDHQLGSTV
                     KKDNCGVCSGDGSTCRLVRGQYKSQLSASKSDDTVVAIPYGSRHIRLVLKGPDHLYLE
                     TKTLQGTKGENSLSSTGTFLVDNSTVDFQKLPDKEILRMAGPLTADFIVKIHDLGPAD
                     STVQFIFYQPIIHRWRETDFFPCSATCGGGYQLTSAECYDLRSSRVVADQYCQYYPEN
                     IKPKPKLQECNLDPCPASDGYKQIMPYDLYHPLPRWEATPWTACSSSCGGGIQSRAVS
                     CVEEDIQGHVTSVEEWKCMYTPKMPVVQPCNIFDCPKWLAQEWSPCTVTCGQGLRYRV
                     VLCIDHRGMHTGGCSAKTKPHIKEECIIPTPCYKPREKLPIEAKLPWFKQAQELEEGA
                     AVSEEPSFIPEAWSACTVTCGMGTQVRTIRCQVLLPFSQSVADLPADECEGPKPASQR
                     ACYAGPCNGETPEFNPDNGDGLLGGLQDLDELYDWEYEGFTKCSESCGGGVQEAVVSC
                     LNKQTRELADENLCVTSRRPPQLLKSCNLDPCPARWEVGKWSPCSLTCGVGLQTRDVI
                     CSHLLSREMNEVVVLADELCHHPKPSTVQACNRFNCPPAWYPAQWQLCSRTCGGGIQK
                     RDVLCKQRMADGSFLELPETFCSASKPTSQQVCKKDDCPSEWLLSDWSECSVSCGEGT
                     QTRSAICQRMLKTGVSTVVNSTLCPPLPFSSSIRPCMLATCARPGRPTTKHGPHIAAA
                     RNIYIQTRRQRKLHFVVGGFAYLLPKTTVVLRCPTRRFRKPLITWEKDGQHSISSAHV
                     TVAPFGYLKIHRLKPSDAGIYTCSAGPAREQFVIKLIGGNRKLVARPLSLWSEEEEAL
                     QVRKPNPKEALQTHKHQNGIFSNGSKAEKRGLTADPGNRYDDIVSRLLEQGGWPGELL
                     ASWEIQDSAERNASSEEDPNAEQALLHLPFTMVAEQKRLDDILRNLSQQPEELRDLYS
                     KHLVAQLAQDIFRSHLENQDMLHKPSEQRFPPMAIPPHKHVSSFSSSLRSSSGEAGGG
                     SRRPHRKPTILRKISAAQQLSASEVVTHLGQTVALASGTLSVLLHCEAAGNPRPAIHW
                     TRNGEAVQFGDRILLQPDDSLQILAPVEADVGFYTCNATNALGYDSVSIAVTLAGKPL
                     VKTSRMTVLNTEKPTVTVDIGGTVRTIQRVNVTINCQVAGVPEAEVTWFRNKSKLGSS
                     HHLHEGSLLLTNVSFSDQGLYSCRAANLHGEQTESTQLLILDPPQVPTQLEDIRALLL
                     ATGPNLPSVLMSPLGTQLVLDPGNSALLGCPIKGHPTPNITWFQNGQPIATAPELTHH
                     IWGAGQILHVANLSGGPQGEFSCLAQNEAGTLVQKASLVIQDYWWSVDRLATCSASCG
                     NRGVHQPRLKCLLNNTEVDPEHCAGKPRPAVQLVACNRRDCPSRWMVTSWSACTRSCG
                     GGVQTRRVTCQKLKASGISTPVSNDMCTQLSKRPVDTQACNQQLCVEWAFSSWGQCNG
                     PCIGPRLAVQHRQVFCQTRDGITLPSEQCSALPRPVSTQNCWSEACSVHWRVSLWTLC
                     TATCGNYGFQSRRVECVHVRTNKAVPEHLCSWGPRPANWQRCNITPCENSTFQSQRTF
                     CKFPTGHRVQRAIPGTEPEHRALDQEVP"
ORIGIN      
        1 ggtgctgggg cggggtcgcc tagccaccgg gcggagactg ccccactcac tcggaacgcc
       61 cccagccggg cgcacgcgct cccattcaaa gcagcggagc tgcaccgcca ctgcagagac
      121 gcgcccaccc tccctgtgct ccgcttgcca gccaggggtc cgcagtcacc gctccgtgtc
      181 tctgccagga ccatggtgcg gctggtgacg cgtagccacc cggggttcct ggctcgcctc
      241 atctgtggca cctggtgcct cctctgtgtc gcaggacagg tatgtggaga ccaaagccaa
      301 ggggctgttt tcctgaggga attcacactg attcgaagag agagccttca tgaagatttc
      361 ctgtctgact tcttgaatag tcacaaaacc gaagacccga gttccaggac tgcacgctca
      421 gaggaagacc gtgaaggcct ctgggatgcc tggggccctt ggagtgagtg ttcccgcacc
      481 tgtggcggag gtgcctccta ttccctgaga cgctgcctga gcagcaagag ctgtgaagga
      541 agaaatattc gatacagaac atgcagtaat gtggactgcc caccagaagc aggtgatttc
      601 cgagctcaac agtgttctgc tcataatgat gtcaagtacc atggccagtt ttatgaatgg
      661 cttcctgtat ctaatgaccc tgacaatcca tgttcactca agtgccaagc aaaaggaacc
      721 agcctggttg ttgaactagc accgaaggtc ttagatggta ctcgatgcta tacagaatca
      781 ctggacatgt gcatcagcgg cctatgccaa atcgttggct gtgatcacca gctgggaagc
      841 accgtcaaga aagataactg tggagtctgc agtggagatg gctcgacctg ccggctggtc
      901 cgagggcagt ataaatctca gctctctgca agtaaatcgg atgacaccgt ggtcgccatt
      961 ccgtatggca gcagacacat ccgccttgtc ttaaaggggc cagatcattt gtatctggaa
     1021 accaagacgc tccaggggac taaaggtgaa aacagtctga gctctacagg cactttcctt
     1081 gtggacaatt ctacagtgga cttccagaaa cttccagaca aagagatact gaggatggct
     1141 gggccactga cagcagattt catcgtcaag atccatgact tgggacctgc agacagcacg
     1201 gtccagttca tcttctacca gcctatcatc caccgatgga gggaaacaga cttctttcct
     1261 tgctcagcaa cctgtggtgg aggttaccag ctgacatctg ccgagtgcta tgaccttcgg
     1321 agtagccgcg tggtggccga ccagtactgt cagtactacc ccgagaacat caagcccaaa
     1381 cccaagcttc aggagtgcaa cctggatcct tgtccagcca gtgacggata caagcagatc
     1441 atgccttatg acctctacca tccccttcct cggtgggagg ccaccccgtg gaccgcatgc
     1501 tcctcctcct gtgggggggg catccagagc cgggcagttt cctgtgtgga ggaggacatc
     1561 caggggcatg tcacttcagt ggaagagtgg aaatgcatgt acaccccaaa gatgccagtc
     1621 gtgcagccct gcaacatttt tgactgccct aaatggctgg cacaggagtg gtctccgtgc
     1681 acagtgacct gtggccaggg cctcagatac cgtgtggtgc tctgcattga ccaccgtgga
     1741 atgcacacag gaggctgcag tgcgaaaaca aagccccaca taaaagaaga atgcatcatt
     1801 cccacaccct gctacaagcc cagagagaaa cttccaatag aggccaaact gccatggttc
     1861 aagcaagccc aggagctaga agaaggagct gccgtgtctg aagagccttc gttcatccca
     1921 gaagcttggt ctgcctgtac tgtcacctgt ggcatgggaa cccaggtgcg aacaataaga
     1981 tgccaggtgc tcctgccttt ctctcagtct gtggctgacc tgcctgcgga tgaatgcgaa
     2041 gggcccaagc cagcatcgca acgtgcctgt tatgcgggac cgtgcaacgg ggaaactccc
     2101 gaatttaacc cagataatgg agacggactc ttgggtggcc tgcaggacct ggacgagctg
     2161 tatgactggg aatatgaggg cttcaccaag tgctctgagt catgtggagg aggtgtccag
     2221 gaggctgtgg tgagctgcct gaacaaacag acccgggagc tcgctgatga gaacctgtgt
     2281 gtgaccagcc gacggccccc acagctcctg aaatcctgta acttggatcc ctgcccagca
     2341 aggtgggaag ttggcaagtg gagtccatgt agcctcacct gtggggttgg cctgcagacc
     2401 agagatgtca tctgttccca cctactctcc agagagatga acgaggtggt tgtcctggct
     2461 gatgagctgt gccatcaccc caaacccagc acagtacaag cctgcaaccg cttcaattgc
     2521 cccccagcct ggtaccctgc acaatggcag ctgtgttcca gaacctgtgg aggagggatt
     2581 cagaaacgtg atgttctttg caagcaacgt atggctgatg gcagcttcct ggagctccca
     2641 gagacctttt gttcagcctc caaaccaacc tcccagcaag tgtgcaagaa agatgactgc
     2701 cccagtgagt ggcttctctc agactggtca gagtgctctg tgagctgtgg ggagggcacc
     2761 cagactcgaa gtgccatttg ccagaggatg ctgaaaactg gagtctccac tgttgtcaat
     2821 tccactctat gccctccctt gcccttctct tcctccatca gaccctgtat gctggcaacc
     2881 tgtgcaaggc ctggaaggcc taccaccaag cacggccctc acatagcagc tgcacgaaac
     2941 atatacatcc agacccgcag gcagaggaag ctgcatttcg ttgtgggagg atttgcttac
     3001 ctgcttccta agactacagt tgtgctccgg tgtcccacac gcagattccg caagcccctc
     3061 atcacctggg agaaggacgg tcagcacagc ataagctccg ctcatgtcac tgtcgctcct
     3121 tttggctacc tgaagatcca tcgcctcaag ccctcagatg cgggcatcta cacctgttct
     3181 gcagggcccg cccgggagca atttgtgatt aagctcattg gaggcaaccg caagctcgtg
     3241 gccagacccc tgagcctttg gagtgaggaa gaggaggccc tgcaggtgag gaagcccaat
     3301 ccaaaggagg ccttgcaaac acacaaacac caaaatggca tcttctctaa tggcagcaaa
     3361 gctgagaagc gtggcctcac cgcagatcct gggaaccgct atgatgacat tgtgtcaagg
     3421 ctgttggagc agggtggctg gccaggagag ctcctggcct catgggagat acaggactcc
     3481 gcagaaagga acgcatcctc ggaagaggat cccaatgctg aacaggccct cctgcatctc
     3541 cccttcacca tggtggcaga gcagaagcgt ctggatgaca tcctcaggaa cctgtctcag
     3601 cagccagagg agctacggga cctctacagc aagcacctgg tggcgcagct ggcccaggac
     3661 atcttccgaa gtcatctgga gaaccaggat atgcttcaca agccctctga gcagaggttt
     3721 cctcccatgg ccatcccacc tcacaaacat gtttctagtt tcagcagctc ccttcggagc
     3781 tcatctggag aggctggggg tggttcccgc aggcctcacc gcaaacccac catcttgcgg
     3841 aagatctcgg cagcacagca actctcagcc tctgaggtag tcacccacct ggggcagact
     3901 gtggctctag ccagcgggac cctgagtgtg cttctgcatt gtgaggcggc aggcaaccca
     3961 aggcctgcca tccactggac caggaatgga gaagctgttc agttcggtga caggattctt
     4021 ctacagccag atgattcctt acagatcttg gcaccagtgg aagctgatgt gggtttctat
     4081 acttgcaatg ccacaaatgc cttgggatat gactctgtct ccattgctgt cacattagca
     4141 ggaaagccac tagtgaaaac atcccgaatg actgtgctca acacagagaa gcctacagtc
     4201 acagtggaca tcggtggcac cgtcagaacc atccaaagag tgaacgtgac aatcaactgc
     4261 caagtggcag gtgtacctga agctgaagtc acttggttca gaaataaaag caaattgggt
     4321 tcctcccacc atctgcacga gggctccttg ctgctcacaa atgtgtcctt ctctgaccaa
     4381 ggcctctatt cctgcagggc agccaatcta catggagaac agacagagag cacacagctc
     4441 ctgattctag atccccccca agtccccaca cagttggaag acatcagggc cttgctctta
     4501 gccactggac cgaaccttcc ttcagtgctt atgtcccctc tgggaacaca gctggtcctg
     4561 gatcctggga attccgctct ccttggctgc cccatcaaag gtcaccctac ccccaatatc
     4621 acctggttcc aaaatggcca gccaattgcc actgccccag agttgaccca ccacatctgg
     4681 ggagctggac agatcctcca tgttgcaaat ctcagtggag gacctcaagg ggagttcagc
     4741 tgcctggctc agaatgaagc agggacactc gtgcagaaag catctttggt gatccaagat
     4801 tactggtggt cagtggatag actggcgacc tgctcagcat cttgtggtaa cagaggtgtt
     4861 catcagccac gcctcaagtg tttgctgaac aacacagagg ttgaccctga gcactgtgca
     4921 gggaagcctc ggcctgctgt gcagcttgtt gcctgcaatc ggagggactg tccttctcga
     4981 tggatggtga cttcctggtc tgcctgtact cggagctgtg gtggaggtgt tcagacccga
     5041 agggtgacct gtcagaagtt gaaggcttct ggtatttcca ccccagtgtc caatgacatg
     5101 tgcacacaac tgtccaaacg gcctgtggac acccaagcct gtaaccagca gctgtgtgtg
     5161 gaatgggctt tctccagctg gggccagtgc aacggacctt gcataggccc tcgtcttgct
     5221 gtgcagcaca gacaagtctt ctgccagacc cgggatggca tcaccttacc atcagagcag
     5281 tgcagtgccc tccccaggcc tgtgagcacc caaaactgct ggtcagaggc ctgcagtgta
     5341 cactggaggg tcagcctctg gaccctgtgc acagcaacct gtggcaacta tggcttccag
     5401 tcccggcggg tggagtgtgt tcacgtgcgc accaacaagg ctgtgcctga gcacctgtgt
     5461 tcctgggggc cccgacccgc caactggcaa cgctgcaaca tcactccatg tgaaaacagt
     5521 acgttccaat cccaaagaac attctgcaaa ttccccacag gtcatcgggt acagagggca
     5581 atccctggga ctgaacctga acacagggca ctggatcaag aagttcccta aggattgtga
     5641 gctcgggtca gaattgaaca ttttaggtgg ggtacacggg tgtgtgcaag gatgtgtata
     5701 cacatgttca gaccacaaaa gatgccagga tgtgtcccaa gggcttcctc tgtcttcatc
     5761 ctgagcccta aaagagccaa gggctggata aaattggcct ccaacacacc tgcagtctac
     5821 cttgaagaag cacgcagaat gcccgccact cagccagctc tgcacccatc actgttgtgc
     5881 ctcacaccag acaaggacct gctgaccccc tccttcccag cccatgcaca tccactggaa
     5941 aggaacagga gactgtgccc tgacagtcat ccattcaccc caccctcagg tctggagcct
     6001 ctccgcccca taccagtatt tgtattctag tcgggtaggg atctagtctc ttctccttag
     6061 aacccgaaac ccaagtggga gatattcccc cacaaaaaat gatgataaat ctttgcaaag
     6121 aatagacaat aagagatagg agtctaaccg ccccctcact aaacttcact gggcagtcat
     6181 ttcccaacac tgaggcagaa agcctgtagg cacgtggccc acactcttct gacatactgg
     6241 gagatgtgtg atgtatactc tggtgaagtg ctggtgttgc tatcagatgg ttgccatgtt
     6301 cagaaagtac tggctcacag agcaaggagt taccgagctt accagctaca ggctgcactg
     6361 gtgtttaaga actgaatgcc agtgtctggg agtcctggtg tactgaagaa tgagaggcct
     6421 ctgaataaag aaaagaaagc tgaacaggga gaggtccaag cctgatgaca cggacctttc
     6481 aaccaggtcc ttgcttgcac actctcacaa ggaacagaat tctgcccttt cgggagcatt
     6541 cctcactaaa ataacaaaag cccatggggg gaagaaagca gagagatgag gttatcccaa
     6601 gaggaaggag agtaaaatta ccagtctgaa gtagaagtag ccatcattag gaagcaaaga
     6661 aggccctgag atagcccagt caatcagcct aacggctgca agctggtggg gagggaaggg
     6721 tagagggctg agcactgcca gaggaaaggc tgtccagacg ggctggaaag ccatggttgg
     6781 ggtagacccc acaggcagct tgccgagtgc ctaggctggt cagcagcagc tgcatctgtg
     6841 agttgtttca catctccttt ctgtccccct cctcccctcc tgctttccca gctgagtgca
     6901 gagacaccac caggtactgc gagaaggtga gacagttgaa actctgccag ctcggccagt
     6961 tccgatctcg ctgctgtgga acgtgtggca aagcatgaag acagggtaca gggatgaact
     7021 ctaccctggc cacacaaagg actcatacaa ccaccttgga catgacttac gctttcttcc
     7081 ttttatttat ttatttgccc ctccccacac tcccatgtcc acctgcaccc atgctcctga
     7141 ggaccttggc atgtttgctt attgcgctag ctggaggcaa gtgttgagaa cagaaaagga
     7201 gacgtctaaa ggaggttgca gagcaggcca ggcagacagc agctcccttg cagagctggc
     7261 tccttcccaa tcagggtctc agagacacag aaatagcaag ccataatcta tagggacagt
     7321 aaggagtttg taacacatag acacaggcac aggccaatag gagtgctgtt cctttgtttc
     7381 ctggtgttaa gaacagggga gcagcatatt agagcagaaa caaggctaga atccagttct
     7441 ctggcggcag ggtgggaaac caagagagaa gagaactgaa gtgtaggcag gtgggttaca
     7501 ccaaaagaga caagcaaaat aggcagaagg cacagagcta tgcattagac cgaggctggg
     7561 aagagggagg gaagggaagc ttgtgtgtgc tcctcagtgg gaggagcttg gagacaggat
     7621 tgattttcaa gcagccacat gagatgcata tgacaagcct gtgcacttgg tacatttgca
     7681 cagtcctgta ggttcaacgg aggtgggaag gatattcagg gcacccgtgc tgcatggcag
     7741 aaggtgtgcc cttcatgcgg ttatacaagt ggctctctac tccctcttgt atcaagtgac
     7801 ttttgtgtct gcagctgtgg aaaacgcaac aaggagtcag taaggcagta aggctgcccc
     7861 tgtcatctcc tcactgaaat caagggtcac tagccctaaa ctaactgctg ctgtgggatg
     7921 ggcatttgag catgagtctt cccgtttttc cacctgagtg actttgctac tccatgttgg
     7981 gccaggggct agaaccatcg ctcacaaagg attcattaag caacctgttt gctggcaaac
     8041 atctacaggg tgtgggaact cttgctacca gagctagcca gagagcagga gagggtagag
     8101 gggtcatgca cacccatagc gaggtgtctc ccagtcatca cacagtgggc ctaggagccc
     8161 ttcctgaacc acagaggagc tgctgtgcgt cacatctatg cagcaggctg ggagtaggga
     8221 gtgtgataag gtgctctggc aaagccagaa gatagcaaga gactcacaac atggccctca
     8281 aaagctttct acctatcctc ctcgctacac ggatactatg gtaattaaca caccagactg
     8341 ggtgaatgga ccgctcagca ggctaagcag cacacacact tcagcaacac gcatcggcta
     8401 cagcgacggc taaaacagaa gcccatggca aatcctcagt cagcagagaa gcttcaacag
     8461 taatatctgc cttggtatag cagatgaggc aggcagagcc ccgtagccat cagagaagcc
     8521 acccctcaca aacacactca ccaaatgctg tcactccaag gtcaccaccg acatcagggc
     8581 tgcatttccc agccagcctg gaaattaggt ttggaagacg atgttaatct gtgtcttcct
     8641 aggacattat ggacaactag ggtgggccat cttcctcatc acaaaaatag gctctaagaa
     8701 attgcgttat taaaagtcag tgtaatgttt atttaaaatt aaagagagtg tttctatgta
     8761 tatcttttgt gaatatttat taggatttct tgtattaaaa agtgcaatat tagtaattgt
     8821 acattgtcat ccagaaaaac aagtctttgg gggattttat taacttcctg cagctgtgtt
     8881 cctaaaaact ctgtgggcca taattgtatt cttcctaatt ttaaaagaaa caaaacagat
     8941 gtttaactct gatccactgt gtacagagta ccttgtaaaa gctaatgtgg gattggggga
     9001 gagcaataga atcgatttgt ttgtgacact agttatacat aaaacgaaca cagattctgt
     9061 aataccgata cagttgatta gttcagtagc tattaaaaat cggtggtcag tgtttgaact
     9121 tttataataa gcaggcatct tccagctctg ccacctgtca gaatgtgagg ttggaagtgc
     9181 ctttcagaac aagtcggaga gcttaggttt ggagtggaaa gcagtgtgct ccttgcatga
     9241 catgaatgta catttaatat ttgttctgtg aattgtgact cagcagtacc acaaattatc
     9301 ggggctgctg gataatgcag aaggagacac ttcctcctct aaaacacaaa actgtattta
     9361 tattttttgt acagataata cagcttattt atttaaatca
//
