LOCUS       XM_039111082            8218 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAMTS-like 1 (Adamtsl1), transcript
            variant X4, mRNA.
ACCESSION   XM_039111082
VERSION     XM_039111082.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111082.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8218
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8218
                     /gene="Adamtsl1"
                     /note="ADAMTS-like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 20 ESTs, 8 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 30 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:362539"
                     /db_xref="RGD:1306439"
     CDS             528..5816
                     /gene="Adamtsl1"
                     /codon_start=1
                     /product="ADAMTS-like protein 1 isoform X4"
                     /protein_id="XP_038967010.1"
                     /db_xref="GeneID:362539"
                     /db_xref="RGD:1306439"
                     /translation="MECCRRAAPGTPLLFLAFLLLSSRTARSEEDREGLWDAWGPWSE
                     CSRTCGGGASYSLRRCLSSKSCEGRNIRYRTCSNVDCPPEAGDFRAQQCSAHNDVKYH
                     GQFYEWLPVSNDPDNPCSLKCQAKGTSLVVELAPKVLDGTRCYTESLDMCISGLCQIV
                     GCDHQLGSTVKKDNCGVCSGDGSTCRLVRGQYKSQLSASKSDDTVVAIPYGSRHIRLV
                     LKGPDHLYLETKTLQGTKGENSLSSTGTFLVDNSTVDFQKLPDKEILRMAGPLTADFI
                     VKIHDLGPADSTVQFIFYQPIIHRWRETDFFPCSATCGGGYQLTSAECYDLRSSRVVA
                     DQYCQYYPENIKPKPKLQECNLDPCPASDGYKQIMPYDLYHPLPRWEATPWTACSSSC
                     GGGIQSRAVSCVEEDIQGHVTSVEEWKCMYTPKMPVVQPCNIFDCPKWLAQEWSPCTV
                     TCGQGLRYRVVLCIDHRGMHTGGCSAKTKPHIKEECIIPTPCYKPREKLPIEAKLPWF
                     KQAQELEEGAAVSEEPSFIPEAWSACTVTCGMGTQVRTIRCQVLLPFSQSVADLPADE
                     CEGPKPASQRACYAGPCNGETPEFNPDNGDGLLGGLQDLDELYDWEYEGFTKCSESCG
                     GGVQEAVVSCLNKQTRELADENLCVTSRRPPQLLKSCNLDPCPARWEVGKWSPCSLTC
                     GVGLQTRDVICSHLLSREMNEVVVLADELCHHPKPSTVQACNRFNCPPAWYPAQWQLC
                     SRTCGGGIQKRDVLCKQRMADGSFLELPETFCSASKPTSQQVCKKDDCPSEWLLSDWS
                     ECSVSCGEGTQTRSAICQRMLKTGVSTVVNSTLCPPLPFSSSIRPCMLATCARPGRPT
                     TKHGPHIAAARNIYIQTRRQRKLHFVVGGFAYLLPKTTVVLRCPTRRFRKPLITWEKD
                     GQHSISSAHVTVAPFGYLKIHRLKPSDAGIYTCSAGPAREQFVIKLIGGNRKLVARPL
                     SLWSEEEEALQVRKPNPKEALQTHKHQNGIFSNGSKAEKRGLTADPGNRYDDIVSRLL
                     EQGGWPGELLASWEIQDSAERNASSEEDPNAEQALLHLPFTMVAEQKRLDDILRNLSQ
                     QPEELRDLYSKHLVAQLAQDIFRSHLENQDMLHKPSEQRFPPMAIPPHKHVSSFSSSL
                     RSSSGEAGGGSRRPHRKPTILRKISAAQQLSASEVVTHLGQTVALASGTLSVLLHCEA
                     AGNPRPAIHWTRNGEAVQFGDRILLQPDDSLQILAPVEADVGFYTCNATNALGYDSVS
                     IAVTLAGKPLVKTSRMTVLNTEKPTVTVDIGGTVRTIQRVNVTINCQVAGVPEAEVTW
                     FRNKSKLGSSHHLHEGSLLLTNVSFSDQGLYSCRAANLHGEQTESTQLLILDPPQVPT
                     QLEDIRALLLATGPNLPSVLMSPLGTQLVLDPGNSALLGCPIKGHPTPNITWFQNGQP
                     IATAPELTHHIWGAGQILHVANLSGGPQGEFSCLAQNEAGTLVQKASLVIQDYWWSVD
                     RLATCSASCGNRGVHQPRLKCLLNNTEVDPEHCAGKPRPAVQLVACNRRDCPSRWMVT
                     SWSACTRSCGGGVQTRRVTCQKLKASGISTPVSNDMCTQLSKRPVDTQACNQQLCVEW
                     AFSSWGQCNGPCIGPRLAVQHRQVFCQTRDGITLPSEQCSALPRPVSTQNCWSEACSV
                     HWRVSLWTLCTATCGNYGFQSRRVECVHVRTNKAVPEHLCSWGPRPANWQRCNITPCE
                     NTECRDTTRYCEKVRQLKLCQLGQFRSRCCGTCGKA"
ORIGIN      
        1 tttctctcct gaatggaaca atacaccgtc acagggagct actgtacttt ccagagcaac
       61 agacaccagc ccaggcaaat ggcaaacaga atctcgtctc ccggagcact aaccaggttg
      121 gttcagagcg cagccccgct tcctctttga gctttgcgct tctgcctctg cacatctctc
      181 ctcttcttgg gctcagctcc ctgctccctt gcctttcagt ccctttccct cttttctgct
      241 tacactgttc actttctctg cgcccccccc tccccaccgc tttgttattc agcatgtctg
      301 attagcagga gtctgattgg ctggctgcct gctctagaga gattccattc agcttacccc
      361 ccacccatcc acccacccac cctcgctcag gaaatgtgag cggggctgat ggaagctgat
      421 aggcaggact ggagtgtgag ccacagcact ggatgtgaca gcagcgggca gaggagcact
      481 tagcagctta ttcagtgtcc gattcggatt ccggcaaaga tccaagtatg gaatgctgcc
      541 gtcgggcagc tcctggcaca ccgctgctct ttctggcttt cctactcctg agttccagga
      601 ctgcacgctc agaggaagac cgtgaaggcc tctgggatgc ctggggccct tggagtgagt
      661 gttcccgcac ctgtggcgga ggtgcctcct attccctgag acgctgcctg agcagcaaga
      721 gctgtgaagg aagaaatatt cgatacagaa catgcagtaa tgtggactgc ccaccagaag
      781 caggtgattt ccgagctcaa cagtgttctg ctcataatga tgtcaagtac catggccagt
      841 tttatgaatg gcttcctgta tctaatgacc ctgacaatcc atgttcactc aagtgccaag
      901 caaaaggaac cagcctggtt gttgaactag caccgaaggt cttagatggt actcgatgct
      961 atacagaatc actggacatg tgcatcagcg gcctatgcca aatcgttggc tgtgatcacc
     1021 agctgggaag caccgtcaag aaagataact gtggagtctg cagtggagat ggctcgacct
     1081 gccggctggt ccgagggcag tataaatctc agctctctgc aagtaaatcg gatgacaccg
     1141 tggtcgccat tccgtatggc agcagacaca tccgccttgt cttaaagggg ccagatcatt
     1201 tgtatctgga aaccaagacg ctccagggga ctaaaggtga aaacagtctg agctctacag
     1261 gcactttcct tgtggacaat tctacagtgg acttccagaa acttccagac aaagagatac
     1321 tgaggatggc tgggccactg acagcagatt tcatcgtcaa gatccatgac ttgggacctg
     1381 cagacagcac ggtccagttc atcttctacc agcctatcat ccaccgatgg agggaaacag
     1441 acttctttcc ttgctcagca acctgtggtg gaggttacca gctgacatct gccgagtgct
     1501 atgaccttcg gagtagccgc gtggtggccg accagtactg tcagtactac cccgagaaca
     1561 tcaagcccaa acccaagctt caggagtgca acctggatcc ttgtccagcc agtgacggat
     1621 acaagcagat catgccttat gacctctacc atccccttcc tcggtgggag gccaccccgt
     1681 ggaccgcatg ctcctcctcc tgtggggggg gcatccagag ccgggcagtt tcctgtgtgg
     1741 aggaggacat ccaggggcat gtcacttcag tggaagagtg gaaatgcatg tacaccccaa
     1801 agatgccagt cgtgcagccc tgcaacattt ttgactgccc taaatggctg gcacaggagt
     1861 ggtctccgtg cacagtgacc tgtggccagg gcctcagata ccgtgtggtg ctctgcattg
     1921 accaccgtgg aatgcacaca ggaggctgca gtgcgaaaac aaagccccac ataaaagaag
     1981 aatgcatcat tcccacaccc tgctacaagc ccagagagaa acttccaata gaggccaaac
     2041 tgccatggtt caagcaagcc caggagctag aagaaggagc tgccgtgtct gaagagcctt
     2101 cgttcatccc agaagcttgg tctgcctgta ctgtcacctg tggcatggga acccaggtgc
     2161 gaacaataag atgccaggtg ctcctgcctt tctctcagtc tgtggctgac ctgcctgcgg
     2221 atgaatgcga agggcccaag ccagcatcgc aacgtgcctg ttatgcggga ccgtgcaacg
     2281 gggaaactcc cgaatttaac ccagataatg gagacggact cttgggtggc ctgcaggacc
     2341 tggacgagct gtatgactgg gaatatgagg gcttcaccaa gtgctctgag tcatgtggag
     2401 gaggtgtcca ggaggctgtg gtgagctgcc tgaacaaaca gacccgggag ctcgctgatg
     2461 agaacctgtg tgtgaccagc cgacggcccc cacagctcct gaaatcctgt aacttggatc
     2521 cctgcccagc aaggtgggaa gttggcaagt ggagtccatg tagcctcacc tgtggggttg
     2581 gcctgcagac cagagatgtc atctgttccc acctactctc cagagagatg aacgaggtgg
     2641 ttgtcctggc tgatgagctg tgccatcacc ccaaacccag cacagtacaa gcctgcaacc
     2701 gcttcaattg ccccccagcc tggtaccctg cacaatggca gctgtgttcc agaacctgtg
     2761 gaggagggat tcagaaacgt gatgttcttt gcaagcaacg tatggctgat ggcagcttcc
     2821 tggagctccc agagaccttt tgttcagcct ccaaaccaac ctcccagcaa gtgtgcaaga
     2881 aagatgactg ccccagtgag tggcttctct cagactggtc agagtgctct gtgagctgtg
     2941 gggagggcac ccagactcga agtgccattt gccagaggat gctgaaaact ggagtctcca
     3001 ctgttgtcaa ttccactcta tgccctccct tgcccttctc ttcctccatc agaccctgta
     3061 tgctggcaac ctgtgcaagg cctggaaggc ctaccaccaa gcacggccct cacatagcag
     3121 ctgcacgaaa catatacatc cagacccgca ggcagaggaa gctgcatttc gttgtgggag
     3181 gatttgctta cctgcttcct aagactacag ttgtgctccg gtgtcccaca cgcagattcc
     3241 gcaagcccct catcacctgg gagaaggacg gtcagcacag cataagctcc gctcatgtca
     3301 ctgtcgctcc ttttggctac ctgaagatcc atcgcctcaa gccctcagat gcgggcatct
     3361 acacctgttc tgcagggccc gcccgggagc aatttgtgat taagctcatt ggaggcaacc
     3421 gcaagctcgt ggccagaccc ctgagccttt ggagtgagga agaggaggcc ctgcaggtga
     3481 ggaagcccaa tccaaaggag gccttgcaaa cacacaaaca ccaaaatggc atcttctcta
     3541 atggcagcaa agctgagaag cgtggcctca ccgcagatcc tgggaaccgc tatgatgaca
     3601 ttgtgtcaag gctgttggag cagggtggct ggccaggaga gctcctggcc tcatgggaga
     3661 tacaggactc cgcagaaagg aacgcatcct cggaagagga tcccaatgct gaacaggccc
     3721 tcctgcatct ccccttcacc atggtggcag agcagaagcg tctggatgac atcctcagga
     3781 acctgtctca gcagccagag gagctacggg acctctacag caagcacctg gtggcgcagc
     3841 tggcccagga catcttccga agtcatctgg agaaccagga tatgcttcac aagccctctg
     3901 agcagaggtt tcctcccatg gccatcccac ctcacaaaca tgtttctagt ttcagcagct
     3961 cccttcggag ctcatctgga gaggctgggg gtggttcccg caggcctcac cgcaaaccca
     4021 ccatcttgcg gaagatctcg gcagcacagc aactctcagc ctctgaggta gtcacccacc
     4081 tggggcagac tgtggctcta gccagcggga ccctgagtgt gcttctgcat tgtgaggcgg
     4141 caggcaaccc aaggcctgcc atccactgga ccaggaatgg agaagctgtt cagttcggtg
     4201 acaggattct tctacagcca gatgattcct tacagatctt ggcaccagtg gaagctgatg
     4261 tgggtttcta tacttgcaat gccacaaatg ccttgggata tgactctgtc tccattgctg
     4321 tcacattagc aggaaagcca ctagtgaaaa catcccgaat gactgtgctc aacacagaga
     4381 agcctacagt cacagtggac atcggtggca ccgtcagaac catccaaaga gtgaacgtga
     4441 caatcaactg ccaagtggca ggtgtacctg aagctgaagt cacttggttc agaaataaaa
     4501 gcaaattggg ttcctcccac catctgcacg agggctcctt gctgctcaca aatgtgtcct
     4561 tctctgacca aggcctctat tcctgcaggg cagccaatct acatggagaa cagacagaga
     4621 gcacacagct cctgattcta gatccccccc aagtccccac acagttggaa gacatcaggg
     4681 ccttgctctt agccactgga ccgaaccttc cttcagtgct tatgtcccct ctgggaacac
     4741 agctggtcct ggatcctggg aattccgctc tccttggctg ccccatcaaa ggtcacccta
     4801 cccccaatat cacctggttc caaaatggcc agccaattgc cactgcccca gagttgaccc
     4861 accacatctg gggagctgga cagatcctcc atgttgcaaa tctcagtgga ggacctcaag
     4921 gggagttcag ctgcctggct cagaatgaag cagggacact cgtgcagaaa gcatctttgg
     4981 tgatccaaga ttactggtgg tcagtggata gactggcgac ctgctcagca tcttgtggta
     5041 acagaggtgt tcatcagcca cgcctcaagt gtttgctgaa caacacagag gttgaccctg
     5101 agcactgtgc agggaagcct cggcctgctg tgcagcttgt tgcctgcaat cggagggact
     5161 gtccttctcg atggatggtg acttcctggt ctgcctgtac tcggagctgt ggtggaggtg
     5221 ttcagacccg aagggtgacc tgtcagaagt tgaaggcttc tggtatttcc accccagtgt
     5281 ccaatgacat gtgcacacaa ctgtccaaac ggcctgtgga cacccaagcc tgtaaccagc
     5341 agctgtgtgt ggaatgggct ttctccagct ggggccagtg caacggacct tgcataggcc
     5401 ctcgtcttgc tgtgcagcac agacaagtct tctgccagac ccgggatggc atcaccttac
     5461 catcagagca gtgcagtgcc ctccccaggc ctgtgagcac ccaaaactgc tggtcagagg
     5521 cctgcagtgt acactggagg gtcagcctct ggaccctgtg cacagcaacc tgtggcaact
     5581 atggcttcca gtcccggcgg gtggagtgtg ttcacgtgcg caccaacaag gctgtgcctg
     5641 agcacctgtg ttcctggggg ccccgacccg ccaactggca acgctgcaac atcactccat
     5701 gtgaaaacac tgagtgcaga gacaccacca ggtactgcga gaaggtgaga cagttgaaac
     5761 tctgccagct cggccagttc cgatctcgct gctgtggaac gtgtggcaaa gcatgaagac
     5821 agggtacagg gatgaactct accctggcca cacaaaggac tcatacaacc accttggaca
     5881 tgacttacgc tttcttcctt ttatttattt atttgcccct ccccacactc ccatgtccac
     5941 ctgcacccat gctcctgagg accttggcat gtttgcttat tgcgctagct ggaggcaagt
     6001 gttgagaaca gaaaaggaga cgtctaaagg aggttgcaga gcaggccagg cagacagcag
     6061 ctcccttgca gagctggctc cttcccaatc agggtctcag agacacagaa atagcaagcc
     6121 ataatctata gggacagtaa ggagtttgta acacatagac acaggcacag gccaatagga
     6181 gtgctgttcc tttgtttcct ggtgttaaga acaggggagc agcatattag agcagaaaca
     6241 aggctagaat ccagttctct ggcggcaggg tgggaaacca agagagaaga gaactgaagt
     6301 gtaggcaggt gggttacacc aaaagagaca agcaaaatag gcagaaggca cagagctatg
     6361 cattagaccg aggctgggaa gagggaggga agggaagctt gtgtgtgctc ctcagtggga
     6421 ggagcttgga gacaggattg attttcaagc agccacatga gatgcatatg acaagcctgt
     6481 gcacttggta catttgcaca gtcctgtagg ttcaacggag gtgggaagga tattcagggc
     6541 acccgtgctg catggcagaa ggtgtgccct tcatgcggtt atacaagtgg ctctctactc
     6601 cctcttgtat caagtgactt ttgtgtctgc agctgtggaa aacgcaacaa ggagtcagta
     6661 aggcagtaag gctgcccctg tcatctcctc actgaaatca agggtcacta gccctaaact
     6721 aactgctgct gtgggatggg catttgagca tgagtcttcc cgtttttcca cctgagtgac
     6781 tttgctactc catgttgggc caggggctag aaccatcgct cacaaaggat tcattaagca
     6841 acctgtttgc tggcaaacat ctacagggtg tgggaactct tgctaccaga gctagccaga
     6901 gagcaggaga gggtagaggg gtcatgcaca cccatagcga ggtgtctccc agtcatcaca
     6961 cagtgggcct aggagccctt cctgaaccac agaggagctg ctgtgcgtca catctatgca
     7021 gcaggctggg agtagggagt gtgataaggt gctctggcaa agccagaaga tagcaagaga
     7081 ctcacaacat ggccctcaaa agctttctac ctatcctcct cgctacacgg atactatggt
     7141 aattaacaca ccagactggg tgaatggacc gctcagcagg ctaagcagca cacacacttc
     7201 agcaacacgc atcggctaca gcgacggcta aaacagaagc ccatggcaaa tcctcagtca
     7261 gcagagaagc ttcaacagta atatctgcct tggtatagca gatgaggcag gcagagcccc
     7321 gtagccatca gagaagccac ccctcacaaa cacactcacc aaatgctgtc actccaaggt
     7381 caccaccgac atcagggctg catttcccag ccagcctgga aattaggttt ggaagacgat
     7441 gttaatctgt gtcttcctag gacattatgg acaactaggg tgggccatct tcctcatcac
     7501 aaaaataggc tctaagaaat tgcgttatta aaagtcagtg taatgtttat ttaaaattaa
     7561 agagagtgtt tctatgtata tcttttgtga atatttatta ggatttcttg tattaaaaag
     7621 tgcaatatta gtaattgtac attgtcatcc agaaaaacaa gtctttgggg gattttatta
     7681 acttcctgca gctgtgttcc taaaaactct gtgggccata attgtattct tcctaatttt
     7741 aaaagaaaca aaacagatgt ttaactctga tccactgtgt acagagtacc ttgtaaaagc
     7801 taatgtggga ttgggggaga gcaatagaat cgatttgttt gtgacactag ttatacataa
     7861 aacgaacaca gattctgtaa taccgataca gttgattagt tcagtagcta ttaaaaatcg
     7921 gtggtcagtg tttgaacttt tataataagc aggcatcttc cagctctgcc acctgtcaga
     7981 atgtgaggtt ggaagtgcct ttcagaacaa gtcggagagc ttaggtttgg agtggaaagc
     8041 agtgtgctcc ttgcatgaca tgaatgtaca tttaatattt gttctgtgaa ttgtgactca
     8101 gcagtaccac aaattatcgg ggctgctgga taatgcagaa ggagacactt cctcctctaa
     8161 aacacaaaac tgtatttata ttttttgtac agataataca gcttatttat ttaaatca
//
