LOCUS       XM_039111080            9311 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAMTS-like 1 (Adamtsl1), transcript
            variant X2, mRNA.
ACCESSION   XM_039111080
VERSION     XM_039111080.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111080.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9311
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..9311
                     /gene="Adamtsl1"
                     /note="ADAMTS-like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 21 ESTs, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:362539"
                     /db_xref="RGD:1306439"
     CDS             155..5542
                     /gene="Adamtsl1"
                     /codon_start=1
                     /product="ADAMTS-like protein 1 isoform X2"
                     /protein_id="XP_038967008.1"
                     /db_xref="GeneID:362539"
                     /db_xref="RGD:1306439"
                     /translation="MVRLVTRSHPGFLARLICGTWCLLCVAGQVCGDQSQGAVFLREF
                     TLIRRESLHEDFLSDFLNSHKTEDPSSRTARSEEDREGLWDAWGPWSECSRTCGGGAS
                     YSLRRCLSSKSCEGRNIRYRTCSNVDCPPEAGDFRAQQCSAHNDVKYHGQFYEWLPVS
                     NDPDNPCSLKCQAKGTSLVVELAPKVLDGTRCYTESLDMCISGLCQIVGCDHQLGSTV
                     KKDNCGVCSGDGSTCRLVRGQYKSQLSASKSDDTVVAIPYGSRHIRLVLKGPDHLYLE
                     TKTLQGTKGENSLSSTGTFLVDNSTVDFQKLPDKEILRMAGPLTADFIVKIHDLGPAD
                     STVQFIFYQPIIHRWRETDFFPCSATCGGGYQLTSAECYDLRSSRVVADQYCQYYPEN
                     IKPKPKLQECNLDPCPARWEATPWTACSSSCGGGIQSRAVSCVEEDIQGHVTSVEEWK
                     CMYTPKMPVVQPCNIFDCPKWLAQEWSPCTVTCGQGLRYRVVLCIDHRGMHTGGCSAK
                     TKPHIKEECIIPTPCYKPREKLPIEAKLPWFKQAQELEEGAAVSEEPSFIPEAWSACT
                     VTCGMGTQVRTIRCQVLLPFSQSVADLPADECEGPKPASQRACYAGPCNGETPEFNPD
                     NGDGLLGGLQDLDELYDWEYEGFTKCSESCGGGVQEAVVSCLNKQTRELADENLCVTS
                     RRPPQLLKSCNLDPCPARWEVGKWSPCSLTCGVGLQTRDVICSHLLSREMNEVVVLAD
                     ELCHHPKPSTVQACNRFNCPPAWYPAQWQLCSRTCGGGIQKRDVLCKQRMADGSFLEL
                     PETFCSASKPTSQQVCKKDDCPSEWLLSDWSECSVSCGEGTQTRSAICQRMLKTGVST
                     VVNSTLCPPLPFSSSIRPCMLATCARPGRPTTKHGPHIAAARNIYIQTRRQRKLHFVV
                     GGFAYLLPKTTVVLRCPTRRFRKPLITWEKDGQHSISSAHVTVAPFGYLKIHRLKPSD
                     AGIYTCSAGPAREQFVIKLIGGNRKLVARPLSLWSEEEEALQVRKPNPKEALQTHKHQ
                     NGIFSNGSKAEKRGLTADPGNRYDDIVSRLLEQGGWPGELLASWEIQDSAERNASSEE
                     DPNAEQALLHLPFTMVAEQKRLDDILRNLSQQPEELRDLYSKHLVAQLAQDIFRSHLE
                     NQDMLHKPSEQRFPPMAIPPHKHVSSFSSSLRSSSGEAGGGSRRPHRKPTILRKISAA
                     QQLSASEVVTHLGQTVALASGTLSVLLHCEAAGNPRPAIHWTRNGEAVQFGDRILLQP
                     DDSLQILAPVEADVGFYTCNATNALGYDSVSIAVTLAGKPLVKTSRMTVLNTEKPTVT
                     VDIGGTVRTIQRVNVTINCQVAGVPEAEVTWFRNKSKLGSSHHLHEGSLLLTNVSFSD
                     QGLYSCRAANLHGEQTESTQLLILDPPQVPTQLEDIRALLLATGPNLPSVLMSPLGTQ
                     LVLDPGNSALLGCPIKGHPTPNITWFQNGQPIATAPELTHHIWGAGQILHVANLSGGP
                     QGEFSCLAQNEAGTLVQKASLVIQDYWWSVDRLATCSASCGNRGVHQPRLKCLLNNTE
                     VDPEHCAGKPRPAVQLVACNRRDCPSRWMVTSWSACTRSCGGGVQTRRVTCQKLKASG
                     ISTPVSNDMCTQLSKRPVDTQACNQQLCVEWAFSSWGQCNGPCIGPRLAVQHRQVFCQ
                     TRDGITLPSEQCSALPRPVSTQNCWSEACSVHWRVSLWTLCTATCGNYGFQSRRVECV
                     HVRTNKAVPEHLCSWGPRPANWQRCNITPCENSTFQSQRTFCKFPTGHRVQRAIPGTE
                     PEHRALDQEVP"
ORIGIN      
        1 tgccccactc actcggaacg cccccagccg ggcgcacgcg ctcccattca aagcagcgga
       61 gctgcaccgc cactgcagag acgcgcccac cctccctgtg ctccgcttgc cagccagggg
      121 tccgcagtca ccgctccgtg tctctgccag gaccatggtg cggctggtga cgcgtagcca
      181 cccggggttc ctggctcgcc tcatctgtgg cacctggtgc ctcctctgtg tcgcaggaca
      241 ggtatgtgga gaccaaagcc aaggggctgt tttcctgagg gaattcacac tgattcgaag
      301 agagagcctt catgaagatt tcctgtctga cttcttgaat agtcacaaaa ccgaagaccc
      361 gagttccagg actgcacgct cagaggaaga ccgtgaaggc ctctgggatg cctggggccc
      421 ttggagtgag tgttcccgca cctgtggcgg aggtgcctcc tattccctga gacgctgcct
      481 gagcagcaag agctgtgaag gaagaaatat tcgatacaga acatgcagta atgtggactg
      541 cccaccagaa gcaggtgatt tccgagctca acagtgttct gctcataatg atgtcaagta
      601 ccatggccag ttttatgaat ggcttcctgt atctaatgac cctgacaatc catgttcact
      661 caagtgccaa gcaaaaggaa ccagcctggt tgttgaacta gcaccgaagg tcttagatgg
      721 tactcgatgc tatacagaat cactggacat gtgcatcagc ggcctatgcc aaatcgttgg
      781 ctgtgatcac cagctgggaa gcaccgtcaa gaaagataac tgtggagtct gcagtggaga
      841 tggctcgacc tgccggctgg tccgagggca gtataaatct cagctctctg caagtaaatc
      901 ggatgacacc gtggtcgcca ttccgtatgg cagcagacac atccgccttg tcttaaaggg
      961 gccagatcat ttgtatctgg aaaccaagac gctccagggg actaaaggtg aaaacagtct
     1021 gagctctaca ggcactttcc ttgtggacaa ttctacagtg gacttccaga aacttccaga
     1081 caaagagata ctgaggatgg ctgggccact gacagcagat ttcatcgtca agatccatga
     1141 cttgggacct gcagacagca cggtccagtt catcttctac cagcctatca tccaccgatg
     1201 gagggaaaca gacttctttc cttgctcagc aacctgtggt ggaggttacc agctgacatc
     1261 tgccgagtgc tatgaccttc ggagtagccg cgtggtggcc gaccagtact gtcagtacta
     1321 ccccgagaac atcaagccca aacccaagct tcaggagtgc aacctggatc cttgtccagc
     1381 caggtgggag gccaccccgt ggaccgcatg ctcctcctcc tgtggggggg gcatccagag
     1441 ccgggcagtt tcctgtgtgg aggaggacat ccaggggcat gtcacttcag tggaagagtg
     1501 gaaatgcatg tacaccccaa agatgccagt cgtgcagccc tgcaacattt ttgactgccc
     1561 taaatggctg gcacaggagt ggtctccgtg cacagtgacc tgtggccagg gcctcagata
     1621 ccgtgtggtg ctctgcattg accaccgtgg aatgcacaca ggaggctgca gtgcgaaaac
     1681 aaagccccac ataaaagaag aatgcatcat tcccacaccc tgctacaagc ccagagagaa
     1741 acttccaata gaggccaaac tgccatggtt caagcaagcc caggagctag aagaaggagc
     1801 tgccgtgtct gaagagcctt cgttcatccc agaagcttgg tctgcctgta ctgtcacctg
     1861 tggcatggga acccaggtgc gaacaataag atgccaggtg ctcctgcctt tctctcagtc
     1921 tgtggctgac ctgcctgcgg atgaatgcga agggcccaag ccagcatcgc aacgtgcctg
     1981 ttatgcggga ccgtgcaacg gggaaactcc cgaatttaac ccagataatg gagacggact
     2041 cttgggtggc ctgcaggacc tggacgagct gtatgactgg gaatatgagg gcttcaccaa
     2101 gtgctctgag tcatgtggag gaggtgtcca ggaggctgtg gtgagctgcc tgaacaaaca
     2161 gacccgggag ctcgctgatg agaacctgtg tgtgaccagc cgacggcccc cacagctcct
     2221 gaaatcctgt aacttggatc cctgcccagc aaggtgggaa gttggcaagt ggagtccatg
     2281 tagcctcacc tgtggggttg gcctgcagac cagagatgtc atctgttccc acctactctc
     2341 cagagagatg aacgaggtgg ttgtcctggc tgatgagctg tgccatcacc ccaaacccag
     2401 cacagtacaa gcctgcaacc gcttcaattg ccccccagcc tggtaccctg cacaatggca
     2461 gctgtgttcc agaacctgtg gaggagggat tcagaaacgt gatgttcttt gcaagcaacg
     2521 tatggctgat ggcagcttcc tggagctccc agagaccttt tgttcagcct ccaaaccaac
     2581 ctcccagcaa gtgtgcaaga aagatgactg ccccagtgag tggcttctct cagactggtc
     2641 agagtgctct gtgagctgtg gggagggcac ccagactcga agtgccattt gccagaggat
     2701 gctgaaaact ggagtctcca ctgttgtcaa ttccactcta tgccctccct tgcccttctc
     2761 ttcctccatc agaccctgta tgctggcaac ctgtgcaagg cctggaaggc ctaccaccaa
     2821 gcacggccct cacatagcag ctgcacgaaa catatacatc cagacccgca ggcagaggaa
     2881 gctgcatttc gttgtgggag gatttgctta cctgcttcct aagactacag ttgtgctccg
     2941 gtgtcccaca cgcagattcc gcaagcccct catcacctgg gagaaggacg gtcagcacag
     3001 cataagctcc gctcatgtca ctgtcgctcc ttttggctac ctgaagatcc atcgcctcaa
     3061 gccctcagat gcgggcatct acacctgttc tgcagggccc gcccgggagc aatttgtgat
     3121 taagctcatt ggaggcaacc gcaagctcgt ggccagaccc ctgagccttt ggagtgagga
     3181 agaggaggcc ctgcaggtga ggaagcccaa tccaaaggag gccttgcaaa cacacaaaca
     3241 ccaaaatggc atcttctcta atggcagcaa agctgagaag cgtggcctca ccgcagatcc
     3301 tgggaaccgc tatgatgaca ttgtgtcaag gctgttggag cagggtggct ggccaggaga
     3361 gctcctggcc tcatgggaga tacaggactc cgcagaaagg aacgcatcct cggaagagga
     3421 tcccaatgct gaacaggccc tcctgcatct ccccttcacc atggtggcag agcagaagcg
     3481 tctggatgac atcctcagga acctgtctca gcagccagag gagctacggg acctctacag
     3541 caagcacctg gtggcgcagc tggcccagga catcttccga agtcatctgg agaaccagga
     3601 tatgcttcac aagccctctg agcagaggtt tcctcccatg gccatcccac ctcacaaaca
     3661 tgtttctagt ttcagcagct cccttcggag ctcatctgga gaggctgggg gtggttcccg
     3721 caggcctcac cgcaaaccca ccatcttgcg gaagatctcg gcagcacagc aactctcagc
     3781 ctctgaggta gtcacccacc tggggcagac tgtggctcta gccagcggga ccctgagtgt
     3841 gcttctgcat tgtgaggcgg caggcaaccc aaggcctgcc atccactgga ccaggaatgg
     3901 agaagctgtt cagttcggtg acaggattct tctacagcca gatgattcct tacagatctt
     3961 ggcaccagtg gaagctgatg tgggtttcta tacttgcaat gccacaaatg ccttgggata
     4021 tgactctgtc tccattgctg tcacattagc aggaaagcca ctagtgaaaa catcccgaat
     4081 gactgtgctc aacacagaga agcctacagt cacagtggac atcggtggca ccgtcagaac
     4141 catccaaaga gtgaacgtga caatcaactg ccaagtggca ggtgtacctg aagctgaagt
     4201 cacttggttc agaaataaaa gcaaattggg ttcctcccac catctgcacg agggctcctt
     4261 gctgctcaca aatgtgtcct tctctgacca aggcctctat tcctgcaggg cagccaatct
     4321 acatggagaa cagacagaga gcacacagct cctgattcta gatccccccc aagtccccac
     4381 acagttggaa gacatcaggg ccttgctctt agccactgga ccgaaccttc cttcagtgct
     4441 tatgtcccct ctgggaacac agctggtcct ggatcctggg aattccgctc tccttggctg
     4501 ccccatcaaa ggtcacccta cccccaatat cacctggttc caaaatggcc agccaattgc
     4561 cactgcccca gagttgaccc accacatctg gggagctgga cagatcctcc atgttgcaaa
     4621 tctcagtgga ggacctcaag gggagttcag ctgcctggct cagaatgaag cagggacact
     4681 cgtgcagaaa gcatctttgg tgatccaaga ttactggtgg tcagtggata gactggcgac
     4741 ctgctcagca tcttgtggta acagaggtgt tcatcagcca cgcctcaagt gtttgctgaa
     4801 caacacagag gttgaccctg agcactgtgc agggaagcct cggcctgctg tgcagcttgt
     4861 tgcctgcaat cggagggact gtccttctcg atggatggtg acttcctggt ctgcctgtac
     4921 tcggagctgt ggtggaggtg ttcagacccg aagggtgacc tgtcagaagt tgaaggcttc
     4981 tggtatttcc accccagtgt ccaatgacat gtgcacacaa ctgtccaaac ggcctgtgga
     5041 cacccaagcc tgtaaccagc agctgtgtgt ggaatgggct ttctccagct ggggccagtg
     5101 caacggacct tgcataggcc ctcgtcttgc tgtgcagcac agacaagtct tctgccagac
     5161 ccgggatggc atcaccttac catcagagca gtgcagtgcc ctccccaggc ctgtgagcac
     5221 ccaaaactgc tggtcagagg cctgcagtgt acactggagg gtcagcctct ggaccctgtg
     5281 cacagcaacc tgtggcaact atggcttcca gtcccggcgg gtggagtgtg ttcacgtgcg
     5341 caccaacaag gctgtgcctg agcacctgtg ttcctggggg ccccgacccg ccaactggca
     5401 acgctgcaac atcactccat gtgaaaacag tacgttccaa tcccaaagaa cattctgcaa
     5461 attccccaca ggtcatcggg tacagagggc aatccctggg actgaacctg aacacagggc
     5521 actggatcaa gaagttccct aaggattgtg agctcgggtc agaattgaac attttaggtg
     5581 gggtacacgg gtgtgtgcaa ggatgtgtat acacatgttc agaccacaaa agatgccagg
     5641 atgtgtccca agggcttcct ctgtcttcat cctgagccct aaaagagcca agggctggat
     5701 aaaattggcc tccaacacac ctgcagtcta ccttgaagaa gcacgcagaa tgcccgccac
     5761 tcagccagct ctgcacccat cactgttgtg cctcacacca gacaaggacc tgctgacccc
     5821 ctccttccca gcccatgcac atccactgga aaggaacagg agactgtgcc ctgacagtca
     5881 tccattcacc ccaccctcag gtctggagcc tctccgcccc ataccagtat ttgtattcta
     5941 gtcgggtagg gatctagtct cttctcctta gaacccgaaa cccaagtggg agatattccc
     6001 ccacaaaaaa tgatgataaa tctttgcaaa gaatagacaa taagagatag gagtctaacc
     6061 gccccctcac taaacttcac tgggcagtca tttcccaaca ctgaggcaga aagcctgtag
     6121 gcacgtggcc cacactcttc tgacatactg ggagatgtgt gatgtatact ctggtgaagt
     6181 gctggtgttg ctatcagatg gttgccatgt tcagaaagta ctggctcaca gagcaaggag
     6241 ttaccgagct taccagctac aggctgcact ggtgtttaag aactgaatgc cagtgtctgg
     6301 gagtcctggt gtactgaaga atgagaggcc tctgaataaa gaaaagaaag ctgaacaggg
     6361 agaggtccaa gcctgatgac acggaccttt caaccaggtc cttgcttgca cactctcaca
     6421 aggaacagaa ttctgccctt tcgggagcat tcctcactaa aataacaaaa gcccatgggg
     6481 ggaagaaagc agagagatga ggttatccca agaggaagga gagtaaaatt accagtctga
     6541 agtagaagta gccatcatta ggaagcaaag aaggccctga gatagcccag tcaatcagcc
     6601 taacggctgc aagctggtgg ggagggaagg gtagagggct gagcactgcc agaggaaagg
     6661 ctgtccagac gggctggaaa gccatggttg gggtagaccc cacaggcagc ttgccgagtg
     6721 cctaggctgg tcagcagcag ctgcatctgt gagttgtttc acatctcctt tctgtccccc
     6781 tcctcccctc ctgctttccc agctgagtgc agagacacca ccaggtactg cgagaaggtg
     6841 agacagttga aactctgcca gctcggccag ttccgatctc gctgctgtgg aacgtgtggc
     6901 aaagcatgaa gacagggtac agggatgaac tctaccctgg ccacacaaag gactcataca
     6961 accaccttgg acatgactta cgctttcttc cttttattta tttatttgcc cctccccaca
     7021 ctcccatgtc cacctgcacc catgctcctg aggaccttgg catgtttgct tattgcgcta
     7081 gctggaggca agtgttgaga acagaaaagg agacgtctaa aggaggttgc agagcaggcc
     7141 aggcagacag cagctccctt gcagagctgg ctccttccca atcagggtct cagagacaca
     7201 gaaatagcaa gccataatct atagggacag taaggagttt gtaacacata gacacaggca
     7261 caggccaata ggagtgctgt tcctttgttt cctggtgtta agaacagggg agcagcatat
     7321 tagagcagaa acaaggctag aatccagttc tctggcggca gggtgggaaa ccaagagaga
     7381 agagaactga agtgtaggca ggtgggttac accaaaagag acaagcaaaa taggcagaag
     7441 gcacagagct atgcattaga ccgaggctgg gaagagggag ggaagggaag cttgtgtgtg
     7501 ctcctcagtg ggaggagctt ggagacagga ttgattttca agcagccaca tgagatgcat
     7561 atgacaagcc tgtgcacttg gtacatttgc acagtcctgt aggttcaacg gaggtgggaa
     7621 ggatattcag ggcacccgtg ctgcatggca gaaggtgtgc ccttcatgcg gttatacaag
     7681 tggctctcta ctccctcttg tatcaagtga cttttgtgtc tgcagctgtg gaaaacgcaa
     7741 caaggagtca gtaaggcagt aaggctgccc ctgtcatctc ctcactgaaa tcaagggtca
     7801 ctagccctaa actaactgct gctgtgggat gggcatttga gcatgagtct tcccgttttt
     7861 ccacctgagt gactttgcta ctccatgttg ggccaggggc tagaaccatc gctcacaaag
     7921 gattcattaa gcaacctgtt tgctggcaaa catctacagg gtgtgggaac tcttgctacc
     7981 agagctagcc agagagcagg agagggtaga ggggtcatgc acacccatag cgaggtgtct
     8041 cccagtcatc acacagtggg cctaggagcc cttcctgaac cacagaggag ctgctgtgcg
     8101 tcacatctat gcagcaggct gggagtaggg agtgtgataa ggtgctctgg caaagccaga
     8161 agatagcaag agactcacaa catggccctc aaaagctttc tacctatcct cctcgctaca
     8221 cggatactat ggtaattaac acaccagact gggtgaatgg accgctcagc aggctaagca
     8281 gcacacacac ttcagcaaca cgcatcggct acagcgacgg ctaaaacaga agcccatggc
     8341 aaatcctcag tcagcagaga agcttcaaca gtaatatctg ccttggtata gcagatgagg
     8401 caggcagagc cccgtagcca tcagagaagc cacccctcac aaacacactc accaaatgct
     8461 gtcactccaa ggtcaccacc gacatcaggg ctgcatttcc cagccagcct ggaaattagg
     8521 tttggaagac gatgttaatc tgtgtcttcc taggacatta tggacaacta gggtgggcca
     8581 tcttcctcat cacaaaaata ggctctaaga aattgcgtta ttaaaagtca gtgtaatgtt
     8641 tatttaaaat taaagagagt gtttctatgt atatcttttg tgaatattta ttaggatttc
     8701 ttgtattaaa aagtgcaata ttagtaattg tacattgtca tccagaaaaa caagtctttg
     8761 ggggatttta ttaacttcct gcagctgtgt tcctaaaaac tctgtgggcc ataattgtat
     8821 tcttcctaat tttaaaagaa acaaaacaga tgtttaactc tgatccactg tgtacagagt
     8881 accttgtaaa agctaatgtg ggattggggg agagcaatag aatcgatttg tttgtgacac
     8941 tagttataca taaaacgaac acagattctg taataccgat acagttgatt agttcagtag
     9001 ctattaaaaa tcggtggtca gtgtttgaac ttttataata agcaggcatc ttccagctct
     9061 gccacctgtc agaatgtgag gttggaagtg cctttcagaa caagtcggag agcttaggtt
     9121 tggagtggaa agcagtgtgc tccttgcatg acatgaatgt acatttaata tttgttctgt
     9181 gaattgtgac tcagcagtac cacaaattat cggggctgct ggataatgca gaaggagaca
     9241 cttcctcctc taaaacacaa aactgtattt atattttttg tacagataat acagcttatt
     9301 tatttaaatc a
//
