LOCUS       XM_039094338            4016 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAM metallopeptidase with
            thrombospondin type 1 motif, 17 (Adamts17), transcript variant X2,
            mRNA.
ACCESSION   XM_039094338
VERSION     XM_039094338.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094338.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4016
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4016
                     /gene="Adamts17"
                     /note="ADAM metallopeptidase with thrombospondin type 1
                     motif, 17; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 ESTs, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 13 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:293004"
                     /db_xref="RGD:1308783"
     CDS             134..2833
                     /gene="Adamts17"
                     /codon_start=1
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 17 isoform X2"
                     /protein_id="XP_038950266.1"
                     /db_xref="GeneID:293004"
                     /db_xref="RGD:1308783"
                     /translation="MCDGTLLPPLVLSLLLLVWGLDPGTVVGDAAADVEVVLPRRLRP
                     DDVHLQLLPGAAGLRQWRRPRASPGDPRAGPGERALLLHLPAFGRDLYLQLRRDLRFL
                     SPGFEVEEAGVSGRSGHPAELCFYSGQVLGHPGSLVSLSACGAAGGLVGLIQLEQELV
                     FIQPLNNSGGPFSRREHLIRRKWSSTSGLATKVEGPRQHCKVVTEEKPRKGKLSWDWR
                     ERRNAIRLTNEHTVETLVVADADMVQYHGAEAAQRFILTVMNMVYNMFQHQSLGIKIN
                     IQVTKLVLLRQRPAKLSIGHHGERSLESFCHWQNEEYGGARYLGNNQVPGGKDDTPPV
                     DAAVFVTRTDFCVHKDEPCDTVGIAYLGGVCSAKRKCVLAEDNGLNLAFTIAHELGHN
                     LGMNHDDDHSSCAGRSHIMSGEWVKGRNPSDLSWSSCSRDDLENFLKSKVSTCLLITD
                     PRSQHALRLPHKLPGMHYSANEQCQILFGTNATFCKNMEHLMCAGLWCLVEGDTSCKT
                     KLDPPLDGTECGADKWCRAGECVSKTPIPEHVDGDWSPWSAWSMCSRTCGTGARFRQR
                     KCDNPPPGPGGTHCQGASVEHAACENLPCPKGVPSFRDQQCQAHDRLSSKKRGLLTAM
                     VVDDKPCELYCSPLGKESPLLVADRVLDGTPCGPYETDLCVYGRCQKIGCDGIIGSAA
                     KEDRCGVCSGDGKTCRVVKGDFSHSRGTGYIEAVVIPAGARRIRVVEDKPAHSFLALK
                     DSSKRSINSDWKIELPGEFQIAGTIVRYVRRGLWEKFSAKGPTTVPLHLMVLLFHDQN
                     YGIHYEYTIPVNQSTENQSEPAKPQDALFLWTHSGWEGCSVQCGGGERRTIVSCTRIV
                     NKTTTLVNDSDCPQASRPEPQVRRCNSHPCQSRFKQEHILKSL"
ORIGIN      
        1 ttaccatgtt gggtttgtcc gcagcgctaa ttactttttc caaaggctgc agggcttcac
       61 tccggctggc gtcgccgcct cacgcgcccc tgctctgccg ctacggtctt gggggctgct
      121 ggtcccgagt accatgtgtg acggcaccct gctgccccct ctcgtcctgt ccttgctgct
      181 gctggtgtgg ggtttggacc cgggcacagt tgtcggcgac gcggcggccg acgtggaggt
      241 ggtgctccca aggcggctgc gccccgacga cgtgcacctg cagctgctgc cgggagcagc
      301 ggggctccgg cagtggcggc gaccgcgagc atctccaggc gaccctcgag cgggaccggg
      361 agagcgcgcc ctgctgctgc acctgccggc ctttgggcga gacctatacc tgcagctgcg
      421 tcgcgacctg cgcttcctgt ccccaggctt cgaggtggag gaggcgggtg tctcagggcg
      481 cagcggacac cctgcggagc tgtgcttcta ctccggacaa gtcctgggcc acccgggctc
      541 cctcgtctcc ctcagcgcct gtggcgccgc cggcggcctg gttggcctca tccagctcga
      601 gcaggagcta gtgttcatcc agcccctcaa caactcaggg ggcccattca gcagaagaga
      661 gcatctgatc agacgcaagt ggtcctctac ctccggccta gctaccaagg tcgagggacc
      721 caggcagcac tgcaaagtag tgacagaaga gaagcccagg aaaggcaagc tgtcttggga
      781 ttggagagag cggaggaatg ccatccggct caccaatgag cacacggtgg agacccttgt
      841 ggtggccgat gctgacatgg tgcagtacca cggggcagag gctgcacaga gattcatcct
      901 caccgtcatg aacatggtat acaacatgtt tcagcaccag agtctcggga ttaaaattaa
      961 cattcaagtt accaagctgg tccttctgcg acaacgccct gccaagttat ccattgggca
     1021 ccatggtgag cggtccctgg agagcttctg tcactggcag aatgaggagt acggaggtgc
     1081 tcggtacctt ggcaataacc aggtgccagg agggaaggat gatacgcccc ctgtggatgc
     1141 tgctgtgttt gtgaccagga cagatttctg cgttcacaaa gatgaacctt gtgacaccgt
     1201 tggaattgct tacttaggag gcgtgtgcag tgctaagagg aagtgtgtgc tcgccgaaga
     1261 caatggtctc aatttggcct ttaccatcgc acatgagctg ggtcacaatt tgggaatgaa
     1321 ccacgacgat gaccactcat cttgtgctgg ccggtcacac atcatgtcgg gagaatgggt
     1381 gaaaggccgg aatcccagcg acctctcttg gtcgtcctgt agtcgagatg accttgagaa
     1441 ctttctcaaa tccaaagtca gtacatgttt actgatcact gaccccagga gccagcatgc
     1501 cctgcgcctt ccacacaagc tgccaggcat gcactacagc gccaacgagc agtgccagat
     1561 tctgtttggc accaacgcta ccttctgcaa aaacatggag catctgatgt gtgctgggct
     1621 gtggtgtctg gtagagggag acacatcctg caagaccaag ctggaccctc ccctggatgg
     1681 cactgagtgt ggagcagaca agtggtgccg ggctggagag tgtgtgagca agacgcccat
     1741 cccagagcat gtggacgggg actggagtcc gtggagcgcc tggagcatgt gcagccgaac
     1801 gtgtggtaca ggagctcgat tccggcagag gaaatgtgac aatccccccc ctgggcctgg
     1861 aggcacacac tgccagggcg ccagcgtaga acatgcagcc tgcgagaacc tgccctgccc
     1921 caagggtgtg cccagcttcc gggaccaaca gtgccaagcc catgaccgac tgagcagcaa
     1981 gaagagaggc ctgttgacag caatggtggt tgatgataag ccctgtgaac tctactgctc
     2041 acccctcggg aaggagtccc cgctgctggt ggctgacagg gtcctggatg gcacaccctg
     2101 cggaccctac gagactgacc tctgcgtgta tggcagatgc cagaaaattg gctgcgacgg
     2161 catcattggg tctgcagcta aagaagacag gtgtggtgtc tgcagtgggg atggcaagac
     2221 ctgccgtgtg gtgaagggtg acttcagcca ctcccggggg acaggttaca tcgaagctgt
     2281 tgtcattcct gctggagctc ggcggatccg tgtggtggaa gacaaacctg cccacagctt
     2341 cctggctctc aaagactcca gtaagagatc tatcaacagc gactggaaga tagaactccc
     2401 tggagagttc cagattgctg gtacaattgt ccgttatgtg agaagaggcc tgtgggagaa
     2461 gttctcagcc aagggaccca ccacagtgcc cctgcatctg atggtgctgt tgtttcatga
     2521 ccagaattat ggaattcatt acgaatacac catacctgta aaccagagca cagaaaacca
     2581 gagtgagccc gccaagccac aggatgccct gttcctctgg acacacagtg gctgggaagg
     2641 gtgcagcgtg cagtgtggag gaggagaacg cagaaccatc gtatcgtgca cacggattgt
     2701 taacaagacc acaaccctgg tgaatgacag tgactgtccc caagcaagcc gccctgagcc
     2761 ccaggtccga cggtgtaact ctcacccatg ccagtcccgt tttaaacagg agcacattct
     2821 aaaatcacta taacaaccac gggatagtga agacagcagc cagtaagtta ctatcactaa
     2881 ttctcattgt caggagcatg gactgtactg tggtggggcc agggcaatgg ctcagtgagt
     2941 aaagtgtaat cttcaggagc tgggtctagg tccttagcag tcatgcagat gagaacatct
     3001 gtatatgtgt ataaccatag cgctagaggg atggatgtgt agagacaggc agatacacaa
     3061 cgctcgccgg aaccagtcta gccagtaggt aagctctcag ttcacctaga gacactgtct
     3121 caaaataaaa tacaatgaag tgatagaggg agatgcccaa cgttgaactt tgacctcctc
     3181 gtgagcacac cgccctttaa taatagtaat aatagtgtga cagcatggta agttgtttcc
     3241 gtgagcattg gtgcaaacac ggtgcctggc actgtgatgt ggtggaggga ggcgataggg
     3301 atgtttcagc cccaccataa tcgtaaggca ccatttctgc attcatggtc tgttactgac
     3361 tgaggcacca tgagatggta ctgttttgaa cttggctaag ccagaacact aacggaaatg
     3421 cactattgta gctggagggc agcttatggg tcataactga caacacctca cagagaaaac
     3481 gttgccatgg gcacacacgt ttgactggca tccattgtct ccccttaatc acttaccttg
     3541 gaggaaaagg acattaagtg ttagaatttt agcgtctgat gtgcccacat aggctaatgg
     3601 ctgtgcttga cctgtttctg tgcctgtttg ttgtttggaa gccatctgaa cttctcttcc
     3661 acatgccctg gtgtaaagtc tggagttctc agaaggaatg aactgtgcaa aagtctcctc
     3721 acaagttcca cgagtttctt tccagcggct tccgtgggaa cgagcatggt actcactcag
     3781 ggactgatgt atcctgtgac gttacccctc tgcctccctt tctgccctga gttcagtgac
     3841 tagttcttgc tccatagccc ttctcatggt gtcaaggcat actttatctc tgctaactgg
     3901 acttggattt tgatgtggag tcttttgggt cttatagctc tgcttgtacc acttgcctga
     3961 ttaaggagtc ttacaaagtg tttgtttttt ggaccaacct cctttgctta gttaaa
//
