LOCUS       XM_039079032            3961 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAM metallopeptidase with
            thrombospondin type 1 motif, 10 (Adamts10), transcript variant X3,
            mRNA.
ACCESSION   XM_039079032
VERSION     XM_039079032.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039079032.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3961
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3961
                     /gene="Adamts10"
                     /note="ADAM metallopeptidase with thrombospondin type 1
                     motif, 10; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 30 ESTs, 4 long SRA reads, 5
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 98 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:314655"
                     /db_xref="RGD:1598320"
     CDS             250..3366
                     /gene="Adamts10"
                     /codon_start=1
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 10 isoform X2"
                     /protein_id="XP_038934960.1"
                     /db_xref="GeneID:314655"
                     /db_xref="RGD:1598320"
                     /translation="MASACQILRWALALGLGLTFKVTHAFRSQDELLSSLESYEIAFP
                     TRVDHNGAMLAFSPPALRRQRRGVGAAAESRLFYKHGLIVADDEEYLIEPLQGGPKGR
                     RGPEESGPHVVYKRSSLRHPHLDTACGVRDEKPWKGRPWWLRTLKPPPARPQGNETER
                     GQLGLKRSVSRERYVETLVVADKMMVAYHGRRDVEQYVLAIMNIVAKLFQDSSLGNIV
                     NILVTRLILLTEDQPTLEITHHAGKSLDSFCKWQKSIVSHSGHGNAIPENGVANHDTA
                     VLITRYDICIYKNKPCGTLGLAPVGGMCERERSCSINEDIGLATAFTIAHEIGHTFGM
                     NHDGVGNGCGARGQDPAKLMAAHITMKTNPFVWSSCSRDYITSFLDSGLGLCLNNRPP
                     RQDFVYPTVAPGQAYDADEQCRFQHGVKSRQCKYGEVCSELWCLSKSNRCITNSIPAA
                     EGTLCQTHTIDKGWCYKRVCVPFGSRPEGVDGAWGPWTPWGDCSRSCGGGVSSSSRHC
                     DSPRPTIGGKYCLGERRRHRSCNTNDCPPGSQDFREMQCSEFDSVPFRGKFYTWKTYR
                     GGGVKACSLTCLADGFNFYTERAAAVVDGTPCRPDTVDICVSGECKHVGCDRVLGSDL
                     REDKCRVCGGDGSACETIEGVFSPALPGTGYEDVVWIPKGSVHIFIQDLNLSLSHLAL
                     KGDQESLLLEGLPGTSQPHRLPLAGTTFHLRQGPDQAQSLEALGPINASLIIMVLAQA
                     ELPALRYRFNAPIARDALPPYSWHYAPWTKCSAQCAGGSQVQVVECRNQLDSSAVAPH
                     YCSAHSKLPKRQRACNTEPCPPDWVVGNWSRCSRSCDAGVRSRSVVCQRRVSAAEEKA
                     LDDSACPQPRPPVLEACQGPMCPPEWAALDWSECTPSCGPGLRHRVVLCKSADQRSTL
                     PPGHCPPAAKPPSTMRCNLRRCPPARWVASEWGECSTQCGLGQQQRTVRCTSHTGQPS
                     RECTEALRPSTMQQCEAKCDSVVPPGDGPEECKDVNKVAYCPLVLKFQFCSRAYFRQM
                     CCKTCQGR"
ORIGIN      
        1 tttttataac cttggcaggc tgctcaggaa gtgagtgcct tcccgcgccc cctcccccgg
       61 ccacgccacc gcgcgctcgc tccctccctt cctgtgcgcg gggcggtgag tctgtgcggc
      121 tacggcagac cggaggctcc aggcacgcag gggaccagtg atgctgccca gactgtgaac
      181 aggggaggca gcactgtagg ggctgccagc agccggggct ggggagagac atgtggacac
      241 gtagccccta tggcttctgc ctgccagatc ctccgctggg cccttgccct ggggctgggc
      301 ctcacattca aggtcacgca tgccttcaga tctcaagatg agctcctgtc cagtttggag
      361 agctatgaga ttgccttccc aactcgagtg gaccacaacg gggcaatgct ggccttctca
      421 ccacctgccc tccggaggca gcgtcggggt gtaggggctg cagctgagtc ccgtctattc
      481 tacaagcatg gcctgattgt ggcagatgac gaagagtacc tgattgagcc cctgcaaggt
      541 ggacccaaag gtcgccgtgg cccagaagag agtggccccc acgtagtata caagcgttcc
      601 tctctgcgtc acccccatct ggacacagcc tgtggagtga gagatgagaa accatggaag
      661 ggtcgtccat ggtggttgcg caccctgaag ccaccgcctg ccaggcccca ggggaatgaa
      721 actgagcgag gccagctggg cctgaagcga tcagtcagcc gagagcgcta tgtggagacc
      781 ctggtggtgg ccgacaagat gatggtggcc taccatgggc ggagagatgt ggagcaatat
      841 gtgttggcca tcatgaatat tgttgccaaa cttttccagg actcgagtct gggaaacatc
      901 gtcaacatcc tcgtcactcg ccttatcctg ctcacagagg accagcccac cctggagatc
      961 acccatcatg ctgggaagtc actggacagc ttctgtaagt ggcagaaatc aatcgtgagc
     1021 cacagtggcc atggcaacgc catcccagag aacggtgtgg caaaccatga cacagctgtg
     1081 ctcatcacac gctatgacat ctgcatctac aagaacaaac cctgcggcac tctaggcctg
     1141 gcccctgtgg gtggaatgtg tgagcgtgag aggagctgca gcatcaatga agatattggc
     1201 ctggccacag ctttcaccat tgcccacgag atcgggcaca cattcggcat gaaccacgat
     1261 ggtgtgggaa acggctgcgg ggctcgaggt caggaccctg caaagctcat ggctgcccat
     1321 atcaccatga agactaatcc attcgtgtgg tcatcatgca gtcgagatta catcaccagc
     1381 tttctggact caggcctggg gctttgcttg aacaaccggc ctcccagaca ggacttcgtg
     1441 tacccaacgg tggctcctgg ccaggcctat gatgctgatg agcagtgccg attccagcat
     1501 ggagtcaaat cgcgtcagtg taaatacggg gaggtctgca gtgaactgtg gtgtctgagc
     1561 aagagcaatc ggtgcatcac caatagcatc ccagctgctg agggaacact gtgccaaaca
     1621 cacactatcg acaaagggtg gtgctacaaa cgagtgtgtg tcccctttgg gtctcgacca
     1681 gagggtgtag acggggcctg gggcccatgg actccatggg gtgactgcag caggtcatgt
     1741 ggcggtggtg tgtcatcttc cagtcgtcac tgcgacagtc ccaggccaac cattgggggc
     1801 aagtactgtc tgggcgagag acggaggcac cggtcctgca acaccaatga ctgtccacct
     1861 ggctcccagg acttcagaga aatgcagtgc tctgaatttg acagtgttcc tttccgtgga
     1921 aaattctaca catggaagac gtaccgagga gggggcgtga aggcctgctc gctgacttgc
     1981 ctagcagatg gcttcaactt ttacacggag agagcagcag ctgtggtgga tggaacaccc
     2041 tgccgccctg acacagtgga catttgtgtc agcggcgagt gcaagcatgt gggctgtgac
     2101 agggtcctgg gttctgatct ccgagaggac aaatgcagag tgtgtggggg tgacggcagt
     2161 gcctgtgaga ccattgaggg ggtcttcagc ccagctttgc caggaactgg gtatgaggac
     2221 gtcgtctgga tccccaaagg ctcagtccac attttcatcc aagatctgaa cctgtccctt
     2281 agtcacctgg ccctaaaggg ggaccaggag tctctgctac tggaggggct acctgggacc
     2341 tcccaacctc accgccttcc cctggctggg accacatttc atctacggca gggaccagac
     2401 caggcccaga gcctagaagc cctgggaccc attaatgcat ctctcatcat catggtgctg
     2461 gcccaggcag agttgcctgc tctccgctac cgcttcaatg cacccattgc ccgggatgca
     2521 ctgcctccct actcctggca ctatgccccc tggaccaaat gctcagctca gtgtgcaggc
     2581 ggcagccagg tccaagtggt ggagtgccga aatcagctgg acagctcagc agtggcccca
     2641 cactactgca gtgcccacag caaattaccc aagaggcagc gtgcctgcaa cacagaacca
     2701 tgcccaccag attgggttgt aggtaactgg tcccgctgca gccgtagctg tgatgctggt
     2761 gtgcgtagcc gctcagtggt gtgccaacgc cgagtgtctg ctgcagagga gaaagcctta
     2821 gatgacagcg cctgtccaca gccacgccca cctgtgctgg aggcctgcca aggcccaatg
     2881 tgcccccctg agtgggcagc cctggactgg tctgagtgta ccccaagttg tgggcctggt
     2941 ctccgccacc gagtggtcct ttgtaagagt gcagatcaac gatccactct gccccctggg
     3001 cactgccctc ctgcagccaa gccaccatct actatgagat gcaacttgcg ccgctgccct
     3061 cccgcccgct gggtggccag tgagtggggt gagtgttcca cacagtgtgg cctcggccag
     3121 cagcagcgca cagtgcgttg caccagccac actggccagc catctcgaga gtgcactgag
     3181 gccctgcggc cgtccaccat gcagcagtgt gaggccaagt gtgacagtgt ggtgccgcct
     3241 ggagatggcc cagaagaatg caaggatgtg aacaaggtgg cttactgccc cctggtgctc
     3301 aaatttcagt tctgtagccg agcctacttc cgccagatgt gctgcaaaac ctgccaaggc
     3361 cgctagggta cctggaacca acctggagca caggctgagg caggggaaat cccactggag
     3421 agggcctgag gggggatggg agggctggga ttgaagggtg agacgcagtt gaaagttatt
     3481 tattgggtaa cccctacagg gctcctggct agggggtgga gaagagctgg ctacccaggg
     3541 accctcttca gtgtcttgcc aagttgacaa tgaaaggaga ggactgcccc ttgtcgcaca
     3601 cacttttaag tccctaacac tcccccaccc tttgatcgga atatgtactg tgaagagtgg
     3661 gggtggggag agggtatgct ggtaccctgc cccccagcac tgttctatcc ctacactctg
     3721 agctggggga atttatatct gctatggggg gagtgggctt gataccacct ccctgtcacc
     3781 ctcccccaga ctgaccaagg ggaagatcta ccccaacctc tgccctgcct gcccaggggg
     3841 ggagtccaac atccaggcca tcccccatca tggtgctaac aagccctgcc ctggggccca
     3901 cacactcctc accaagaagc cttccattaa taaagttctg tcttgtgtag atttccgctc
     3961 a
//
