LOCUS       XM_039094404            3704 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAM metallopeptidase domain 9
            (Adam9), transcript variant X2, mRNA.
ACCESSION   XM_039094404
VERSION     XM_039094404.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3704
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3704
                     /gene="Adam9"
                     /gene_synonym="MDC9"
                     /note="ADAM metallopeptidase domain 9; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 71 ESTs, 2 long SRA reads, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 85 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:290834"
                     /db_xref="RGD:621473"
     CDS             181..2445
                     /gene="Adam9"
                     /gene_synonym="MDC9"
                     /codon_start=1
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 9 isoform X2"
                     /protein_id="XP_038950332.1"
                     /db_xref="GeneID:290834"
                     /db_xref="RGD:621473"
                     /translation="MGPRALSPLASLRLRWLLACGLLGPVLEAGRPDSEQTVHLSSYE
                     IVTPWRLSRERREALRPSSKQISYVIQAQGKQHIIHLERNTDLLPNDFVVYTYDEEGS
                     LLSDHPNVQRRRAVLPQTRYVELFIVVDKERYNMMGRNQTAVREEMIRLANYLDSMYI
                     MLNIRIVLVGLEIWTDRNPINIIGGAGDVLGNFVQWREKFLITRRRHDSAQLVLKKGF
                     GGTAGMAFVGTVCSRSHAGGINVFGQITVETFASIVAHELGHNLGMNHDDGRECFCAA
                     KSCIMNSGASGSRNFSSCSAEDFEKLTLNKGGSCLLNIPKPDEAYSAPSCGNKLVDPG
                     EECDCGTPKECELDPCCEGSTCKLKSFAECAYGDCCKDCQFLPGGSMCRGKTSECDVP
                     EYCNGSSQFCPPDVFIQNGYPCWNSKAYCYNGVCQYYDAQCQVIFGSKAKAAPRDCFI
                     EVNSKGDRFGNCGVSGSNYKTCATGNALCGKLQCENVQEMPVFGIVPAIIQTPSRGTK
                     CWGVDFQLGSDVPDPGMVNEGTKCDAGKICRNFQCVNASVLNYDCDIQGKCHGHGVCN
                     SNKNCHCEDGWAPPHCDTKGYGGSVDSGPTYNAKSTALRDGLLVFFFLIIPLVAAAFF
                     LFIKRDELRKTFRKKRSQMSDGRNQANASRPPGDPSVSRPPGGPSVSRPPGGPNVSRP
                     PGGPNVSRPPGGPSVSRPPPVHGNRFPVPTYAIKQPPQFPSRPPPPQPKIPSQGNLIP
                     ARPAPAPPLYSSLT"
ORIGIN      
        1 ccgcaggatc gcgagcagga gaaaggggcg gggtgtgggg gggtgctgcg tcagtgccgc
       61 gcgcgtgctc gccgtgggcg cgcgccccgc cagccctggg gcccccgcgg ggttgcaggg
      121 atgaccgaag gggcggaggc ggcggccgcg cgttgagccg aacctgccga agccctagcc
      181 atggggccgc gcgcgctctc gcccctcgcc tctctgcgac taaggtggct gctggcgtgt
      241 ggcttgctgg gcccagtcct cgaggccggg cggccagact ctgaacagac cgtccatctt
      301 tcttcttatg aaattgtaac tccttggaga ttaagtagag aaagaaggga agctctgagg
      361 cccagttcaa aacagatctc ttatgtcatc caggcccaag gaaaacagca tattattcac
      421 ttggaaagaa acacagacct tttacctaac gactttgtag tttataccta cgacgaggag
      481 ggctccctac tctctgacca tcccaacgta cagagaagaa gagctgttct cccgcagacc
      541 cgctacgtgg agctgttcat tgttgtagac aaggaaaggt acaacatgat gggaaggaac
      601 cagactgctg tgagagaaga gatgattcgc ttagcaaact acctggatag catgtacatc
      661 atgttaaaca ttcgaattgt gctagttgga ctagaaattt ggacagatag aaatcctatc
      721 aatataattg gaggagctgg agatgtattg ggcaactttg tacagtggcg ggaaaagttt
      781 cttataacac gtcggagaca tgacagtgca cagttggttt tgaagaaagg ctttggtgga
      841 actgcaggaa tggcatttgt aggaacagta tgttcaagga gccacgcagg tgggattaat
      901 gtgtttgggc aaatcaccgt ggagacattt gcgtccattg ttgctcatga actgggacat
      961 aaccttggga tgaatcatga tgatgggaga gagtgtttct gtgcagcaaa gagctgtatc
     1021 atgaattcag gagcatcagg gtccaggaac ttcagcagtt gcagtgcaga ggactttgag
     1081 aaattaactt tgaacaaggg aggaagctgc ctgctcaaca tcccgaagcc tgacgaggcc
     1141 tacagcgcgc cctcctgtgg taacaagctg gtggaccccg gggaggagtg tgactgtggc
     1201 acaccaaagg aatgtgagtt ggatccatgc tgtgaaggaa gcacttgtaa gctcaagtca
     1261 tttgctgagt gtgcatatgg cgactgttgt aaagattgcc agttccttcc aggaggctct
     1321 atgtgcagag ggaagaccag tgagtgtgat gtccctgagt actgcaatgg ctcctctcag
     1381 ttctgcccac ccgatgtctt cattcagaac ggctatcctt gttggaatag caaagcctac
     1441 tgttacaatg gcgtgtgcca gtattatgac gctcagtgcc aggtcatctt tggttcaaaa
     1501 gctaaggctg ccccaagaga ttgcttcatt gaagtgaatt ctaaaggtga cagatttggc
     1561 aactgtggtg tctccggcag taattacaaa acgtgtgcca cagggaacgc gttgtgtgga
     1621 aagcttcagt gtgagaacgt gcaggagatg ccggtgttcg gaatcgtgcc agctatcatt
     1681 cagacaccca gccgaggcac caaatgttgg ggtgtggatt tccagcttgg ttccgatgtc
     1741 ccagacccag ggatggtgaa tgaaggcaca aaatgtgatg ctgggaagat ttgtaggaat
     1801 tttcagtgtg taaatgcttc tgtcctgaat tatgactgtg acattcaggg aaaatgtcac
     1861 ggccatgggg tatgtaacag caataagaat tgtcactgtg aagatggctg ggctccccca
     1921 cactgtgaca ccaaaggata tggagggagt gtggacagtg ggccgacgta caatgcaaag
     1981 agcacggccc tgagggatgg acttctggtc ttcttcttcc taatcatccc cctggttgcg
     2041 gctgcctttt tcctcttcat caagagagat gaactgagga aaaccttcag gaagaagaga
     2101 tcacaaatgt cagatggcag aaatcaagca aatgcctcta gaccgccagg ggaccccagt
     2161 gtctccagac caccaggggg tccaagtgtc tccagaccac cagggggccc aaatgtctcc
     2221 agaccaccag ggggcccaaa tgtctccaga ccaccagggg gcccgagtgt ctccagacca
     2281 ccacccgtgc atggaaacag attcccagta ccaacctatg ccatcaagca gccaccacag
     2341 tttccatcaa ggccacctcc accacaaccg aaaatacctt ctcagggaaa cttgattccg
     2401 gcccggccag ctcctgcacc tcctttatat agctccctca cctgacagca gagtcttatt
     2461 tttcaaaagt cttcagggaa ctgagcaaat gtggtttttt ttttctgatg ttttcttgaa
     2521 aagcctttct cttccagccg tgaatgaaca caaattacca caaaacaagc tttattaaca
     2581 cagaagccca gtggggttgg agaaatacag gaacgctgca ggcactccgg ggatttaaaa
     2641 cgaatgttcc catcatttaa atgttttcta tggccatttg tgaatttaat gcactcgatg
     2701 tggattaagt tattttgaac acgttactgt aatgattctc aaattaactg cattagtgta
     2761 agacttgtca tcatgcgctt aaatgtgatc ctgacctttt gaccccagtt accatttgaa
     2821 cgtgtattaa cttaggaaga ctaattgcca ataacatttg cattttcacc ttgcatggat
     2881 taacagtcat ttatgtggac ttaggtctct tagtacacag agaagcaggt acctggaagg
     2941 agaatgcata cacgggaact acagttgcca gatcatgata tactcggaaa gtatgaaaca
     3001 cggcgtgtac tcagttattg ccttccattt tttatgatct ttcaactatg ataaccttga
     3061 tagaaatcga cttaacacaa tcagttattg ccttccattt ttaaatctct tcaactgtaa
     3121 tgactacgat aggagctgat ttgtctcttc agttttcttc atgcatcatg gtaaagcatt
     3181 gcaatcgcgt tgttttaatc gaagtgcaca ctgtatggta cgaggcgttt attataccca
     3241 agcagatggg catcagtcga ccgagcagga gcacagagaa aaccttccaa gagttgaggt
     3301 gttacaaaac cacttgagaa ttcatgagca ctttaaaatc tgaatttcaa agcttgatat
     3361 taagtcattt agaatgttta catttactgt ggtgtgctgg atcctgtctc ttttgactaa
     3421 tattttcata acaattaggc tggagcaagg aaggaaacaa tggcttcctt agataactac
     3481 agaagttata ttggtctctg tgattactct ctcagctgta ttaaaatgaa tttgtacttt
     3541 gaaaggaatg atattgacac taaaatttta aacacttaaa ttttttcata atctttcata
     3601 aagaagttta ataataggta tattaactga atttcattag ttttttaaaa taatattttg
     3661 tttgtgtata tattacatat taaaataaaa acatttacaa caaa
//
