LOCUS       XM_039093144            2877 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAM metallopeptidase domain 28
            (Adam28), transcript variant X2, mRNA.
ACCESSION   XM_039093144
VERSION     XM_039093144.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093144.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2877
                     /gene="Adam28"
                     /note="ADAM metallopeptidase domain 28; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:290344"
                     /db_xref="RGD:727820"
     CDS             76..2322
                     /gene="Adam28"
                     /codon_start=1
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 28 isoform X2"
                     /protein_id="XP_038949072.1"
                     /db_xref="GeneID:290344"
                     /db_xref="RGD:727820"
                     /translation="MQQWRLLVVWFLLSPVPASAIKELPKAKNYEVVYPIRLHLLHKR
                     ETKEPEPKETFETELRYKMTVNGKVVELYLKKNNKLLAPGYLETYYNSSGNKVTTSPQ
                     IMDSCYYQGHIINEKDSAASISMCQGLRGYFSQADERYFIEPLSSEILDEQAHALFKD
                     DPKEDQENSNCGVDDALWLQGLHQDVVLPATRLIKLNDGMVQEPKKYIEYYVVLDNGE
                     FKKYNKNLDEIRKRVHEMANYVNMLYNKLDAHVALVGMEIWTDEDKIKITPDANTTLE
                     NFSKWRGNDLLKRKHHDVAQLISSTDFSGSTVGLAFMSSMCSPYHSVGIVQDHSNYHL
                     RVAGTMAHEMGHNLGMIHDYLSCKCPSEVCVMEQSLRFHMPTDFSSCSRDNYRRFLEE
                     KLSHCLFNSPLPSDIISTPVCGNQLLEMNEDCDCGTPKECTNKCCDAETCKIKAGFQC
                     ALGECCEKCQLKKPGVVCRAAKDECDLPEMCDGKSSHCPVDRFRVNGFPCQNGHGYCL
                     KGNCPTLQQQCMDMWGPETKVANKSCYKQNEGGSKYGYCHVENGTHMPCKAKDAMCGK
                     LFCEGGSGDLPWKGLTIAFLTCKLFDPEDINQGVDMVANGTKCGNNKVCINAECVDME
                     KTYKSANCSSKCKGHAVCDHELQCQCKEGWAPPDCEDSATVFRVSIMVGVLFPLAAIF
                     VVIAIVIHHQSARRKQRRVQRLPPIKDAKLHKQKCRPQKVKDIQPQELITKPNFPPPP
                     IPVSWNKF"
ORIGIN      
        1 cccttaagag gagactgggg cagaagcaac ctcacaggtg tgagcggatg cacccactgc
       61 tcccaggatc acagaatgca gcaatggcga cttctggtag tctggttcct cctttctcca
      121 gttccagcaa gtgcaataaa agaactccct aaagccaaga attatgaagt ggtttatccc
      181 ataagacttc atctgttgca taaaagagag accaaagagc cagagccaaa ggaaacattt
      241 gaaactgagc tcaggtacaa aatgacagta aacggaaagg ttgtggagct atacctgaag
      301 aagaacaaca agctcctagc acctggctac ttggaaacat actataattc cagtggaaac
      361 aaggtcacca caagcccgca aatcatggat agctgttact accaaggaca catcataaac
      421 gagaaagatt cagcagccag catcagcatg tgtcaagggc tacggggtta cttcagtcaa
      481 gctgatgaaa ggtattttat tgaacctttg agctcggaga tcttggatga gcaggcacat
      541 gcactcttca aggatgatcc caaagaagac caggagaaca gtaactgtgg agtggatgat
      601 gcgctatggc tccaaggact gcatcaggat gtggtccttc ctgccaccag gttgattaag
      661 ctgaatgatg ggatggtcca agaacctaag aagtacatag aatattatgt ggtcctggac
      721 aatggtgagt ttaagaaata caataaaaat cttgatgaaa taagaaagag agtacatgag
      781 atggccaatt atgtcaacat gctttacaat aagcttgatg cccatgtggc cttagttgga
      841 atggaaatct ggactgatga ggataaaata aagataacac cagatgccaa caccaccctg
      901 gaaaacttct ctaagtggag gggaaatgat ctgctaaagc gaaagcacca tgatgttgcc
      961 cagctaatct cctcaacaga tttttctggt tcaacagttg gtctagcctt catgtcttca
     1021 atgtgttctc cttaccattc tgttggcatt gttcaggacc acagtaacta ccatcttcga
     1081 gtcgcaggaa caatggcaca tgaaatgggt cacaaccttg gcatgattca tgactacttg
     1141 agttgtaagt gcccatctga agtctgtgta atggagcagt cactaagatt ccacatgcct
     1201 acagacttca gctcctgcag tcgtgacaat tacagacgat ttcttgaaga gaaattatct
     1261 cattgcctct ttaatagtcc tttgccttca gatatcatat ccaccccagt ctgtgggaac
     1321 cagttattgg aaatgaatga ggactgtgac tgtggcactc ccaaggagtg taccaacaaa
     1381 tgctgtgatg cagagacctg taaaattaaa gcaggtttcc agtgtgcttt gggagaatgc
     1441 tgcgagaaat gccaacttaa aaagcctggg gttgtgtgca gagcagcaaa agatgagtgt
     1501 gatctgcctg aaatgtgtga tggtaaatcc agccactgcc cagttgacag attcagagtc
     1561 aatggcttcc cttgccaaaa tgggcatggc tactgcttga agggcaactg tcccaccctg
     1621 cagcagcagt gcatggacat gtggggccca gaaaccaagg ttgcaaataa gtcatgttac
     1681 aagcagaatg aaggtgggtc aaagtacgga tactgtcacg tggagaatgg tacccacatg
     1741 ccctgcaaag ccaaagatgc catgtgtggg aagttgttct gtgagggtgg gtcaggtgat
     1801 ctgccctgga aaggacttac aatagctttc ctgacatgta aattatttga tcctgaagac
     1861 atcaatcaag gagtagacat ggtggccaat ggaaccaaat gtggaaataa caaggtgtgc
     1921 attaatgcag agtgtgtgga catggagaag acatacaagt cagccaactg ctcctccaag
     1981 tgcaaaggcc acgcagtgtg tgaccatgag cttcagtgtc agtgcaagga aggatgggcc
     2041 cctcctgact gtgaggattc tgccacagtc ttccgcgtct ccatcatggt tggcgtgctc
     2101 tttcctctgg cagccatatt tgtggtgatt gctatagtga tccatcatca aagtgccaga
     2161 agaaagcaaa ggagagttca gaggctacca cccatcaagg atgccaagct acacaagcag
     2221 aagtgtagac cccaaaaggt gaaggatatt caaccccagg agctaatcac aaagccaaat
     2281 ttcccaccgc caccaattcc tgtttcctgg aataaatttt aacttgcgag atcgtgcata
     2341 aacatctaaa ttcctggatt gcaagaaaaa agtcagatcg tctgtcaaca acagaaccat
     2401 gttgtcttta acatcttcag cttcattgac agatagtaga accaacatgg ttggttgggt
     2461 accaaatacc cccttccttg ttttaggaac tctaatttag tcttgctgtc cagttttaga
     2521 atgatgggca caactcataa caatgctagc ccactcaaaa caatcacaat tttgtttttg
     2581 ccagagattt gtaagtagat gggtaactcc ccattttgtt cctgtggatg agagaggaga
     2641 cacgttggga aatttctgag ggatatttct ccattcatcc tttcttctgg ttgttgacat
     2701 ctgatacttc tgcagctgtg ctgtgatctg aagacaaaga tgatgtgaac aagatagagc
     2761 cgggagataa acaaaattca actgcacttc ctaagatgtt attgaactgg tagattaaca
     2821 attattggag tgggtccact ttttgctagg acttcttgta caatcaataa attttcc
//
